RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Slit3Q9WVB4 1523 aa26.17■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Znf316Q6PGE4 1016 aa26.17■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Mbd3Q9Z2D8 285 aaKnown RBP26.16■■□□□ 1.78
Ctdsp1-201ENSMUST00000027367 Cps1Q8C196 1500 aa26.13■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Usp32F8VPZ3 1604 aa26.12■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 HnrnpmQ9D0E1 729 aaKnown RBP26.11■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Dip2bQ3UH60 1574 aa26.11■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 PzpQ61838 1495 aa26.11■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Kcnn1Q9EQR3 537 aa26.1■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Iqcf3Q9D498 203 aa26.1■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Pik3c2bE9QAN8 1632 aa26.09■■□□□ 1.77
Ctdsp1-201ENSMUST00000027367 Idi2Q8BFZ6 227 aa26.08■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 4933416C03RikQ3V063 378 aa26.07■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 PtpruB1AUH1 1446 aa26.06■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Tnrc6bQ8BKI2 1810 aaKnown RBP26.04■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Slc12a5Q91V14 1138 aa26.04■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Birc3O08863 600 aa26.03■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Dusp27Q148W8 1138 aa26.03■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Trim28Q62318 834 aa26.03■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Mapk8ip3Q9ESN9 1337 aa26.03■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Ncbp3Q8BZR9 615 aaKnown RBP26.02■■□□□ 1.76
Ctdsp1-201ENSMUST00000027367 Kif1aP33173 1695 aa26.01■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Pik3r4Q8VD65 1358 aa26■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Ksr2Q3UVC0 959 aa25.99■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Kdm2bQ6P1G2 1309 aa25.98■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Arap3Q8R5G7 1538 aa25.98■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 CatipB9EKE5 520 aa25.98■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 PalmQ9Z0P4 383 aa25.98■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Polr3glQ8R0C0 218 aa25.97■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Chd4Q6PDQ2 1915 aaKnown RBP25.97■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Rreb1Q3UH06 1700 aaKnown RBP25.96■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Q3UJC8 639 aa25.96■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 Cavin4A2AMM0 362 aa25.95■■□□□ 1.75
Ctdsp1-201ENSMUST00000027367 4930407I10RikD3Z5T8 1512 aa25.95■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 DaxxO35613 739 aa25.95■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Pank1Q8K4K6 548 aa25.95■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Trim26Q99PN3 545 aa25.94■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Znf541Q0GGX2 1363 aa25.94■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Ppp1r15aP17564 657 aa25.93■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Tspyl2Q7TQI8 677 aa25.93■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Ciz1Q8VEH2 845 aa25.92■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Uhrf1bp1lA2RSJ4 1457 aa25.92■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Uhrf1bp1B2KF50 1429 aa25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Ecm2Q5FW85 670 aa25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Ccar1Q8CH18 1146 aaKnown RBP25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 N4bp2F8VQG7 1678 aaKnown RBP25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Fchsd2Q3USJ8 740 aa25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Sirt1Q923E4 737 aa25.91■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Q4VA45 678 aa25.9■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 Trim58Q5NCC9 485 aa25.9■■□□□ 1.74
Ctdsp1-201ENSMUST00000027367 PaskQ8CEE6 1383 aa25.88■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Ttll13A4Q9F6 804 aa25.88■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 NgefQ8CHT1 710 aa25.87■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Pdcl3Q8BVF2 240 aa25.86■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 D430041D05RikF6ZGR6 1678 aa25.86■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Fam135bQ9DAI6 1403 aa25.86■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Kif20bQ80WE4 1774 aaKnown RBP25.85■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 MyclP10166 368 aa25.85■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 B4galnt3Q6L8S8 986 aa25.85■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Znf521Q6KAS7 1311 aa25.85■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Hoxb7P09024 217 aa25.84■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Pcdh10E9PXQ7 1057 aa25.84■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Swt1Q9DBQ9 907 aa25.84■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Ttc21aQ8C0S4 1314 aa25.84■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Ankrd50F7BE84 1390 aa25.83■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Rsph6aQ8CDR2 708 aa25.83■■□□□ 1.73
Ctdsp1-201ENSMUST00000027367 Spef2Q8C9J3 1734 aa25.82■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Astn2Q80Z10 1352 aa25.81■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Bcl9Q9D219 1425 aa25.81■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Abcc10Q8R4P9 1501 aa25.81■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 CastP51125 788 aa25.81■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 GphnQ8BUV3 769 aaKnown RBP25.8■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Zmym3Q9JLM4 1370 aa25.8■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Atp7bQ64446 1462 aa25.8■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Smc5Q8CG46 1101 aaKnown RBP25.8■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Dbr1Q923B1 550 aa25.8■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Rbm25B2RY56 838 aaKnown RBP25.79■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Sox12Q04890 314 aa25.79■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Znf335A2A5K6 1337 aa25.79■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 C5P06684 1680 aa25.79■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Chmp5Q9D7S9 219 aa25.78■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Idi1P58044 227 aa25.77■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Als2Q920R0 1651 aa25.77■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Lmtk3Q5XJV6 1424 aa25.77■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 Mcm10Q0VBD2 885 aa25.77■■□□□ 1.72
Ctdsp1-201ENSMUST00000027367 EspnQ9ET47 871 aa25.76■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Duxf3A0A0N4SV92 674 aa25.75■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Gm10563F6WIE4 79 aa25.74■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 AampJ3QN89 436 aa25.74■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 ChgaP26339 463 aaKnown RBP25.74■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 NalcnQ8BXR5 1738 aa25.74■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Mon2Q80TL7 1715 aa25.73■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Med1Q925J9 1575 aa25.73■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Pik3c2aQ61194 1686 aa25.73■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Eif4a2P10630 407 aa25.73■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Ccdc60Q8C4J0 545 aa25.73■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Mdc1Q5PSV9 1707 aa25.72■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 NudcO35685 332 aaKnown RBP25.71■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Cabp2Q9JLK4 216 aa25.71■■□□□ 1.71
Ctdsp1-201ENSMUST00000027367 Ppp1r3fQ9JIG4 799 aa25.71■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 93.8 ms