RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Ccdc183A2AJB1 534 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Liat1Q810M6 228 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Cabp4Q8VHC5 271 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Usp16Q99LG0 825 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Q3TQI7 289 aaKnown RBP10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 NinlQ6ZQ12 1394 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Abca9Q8K449 1623 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Plin1Q8CGN5 517 aa10.62□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Arhgap23Q69ZH9 1483 aa10.61□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Eif4g2Q62448 906 aaKnown RBP10.61□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Kiaa0556Q8C753 1610 aa10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 AglF8VPN4 1532 aa10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Cdc37l1Q9CZP7 335 aa10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Mfap1aC0HKD8 439 aaKnown RBP10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Mfap1bC0HKD9 439 aaKnown RBP10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Gsdma3Q5Y4Y6 464 aa10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 HnrnpmQ9D0E1 729 aaKnown RBP10.6□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Slc12a5Q91V14 1138 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Atxn3Q9CVD2 355 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Xrn1P97789 1719 aaKnown RBP10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Yeats2Q3TUF7 1407 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Fam135bQ9DAI6 1403 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 SkilQ60665 675 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Gm21190A0A0G2JGJ6 266 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Rabep1O35551 862 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 CastP51125 788 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Dip2cE9PWR4 1557 aa10.59□□□□□ -0.71
Sf3b1-201ENSMUST00000027127 Q3UJC8 639 aa10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Usp19Q3UJD6 1360 aa10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Prex1Q69ZK0 1650 aa10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 GphnQ8BUV3 769 aaKnown RBP10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Knl1Q66JQ7 1612 aa10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Clasp1Q80TV8 1535 aaKnown RBP10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Ric3Q8BPM6 367 aa10.58□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Myo5cE9Q1F5 1742 aa10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Mcm2P97310 904 aa10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Tspyl2Q7TQI8 677 aa10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Aldh1l1Q8R0Y6 902 aa10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Tmc1Q8R4P5 757 aa10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 PtmsQ9D0J8 101 aaKnown RBP10.57□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Kiaa1107Q80TK0 1369 aa10.56□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Kdm2bQ6P1G2 1309 aa10.56□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Pde3bQ61409 1100 aa10.56□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 MccE9PWI3 1003 aa10.56□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Astn2Q80Z10 1352 aa10.56□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Wwc1Q5SXA9 1104 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 MvpQ9EQK5 861 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Cabp2Q9JLK4 216 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Hoxa7P02830 229 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Dennd6aQ8BH65 605 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 RereQ80TZ9 1558 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 HypkQ9CR41 129 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Akap12Q9WTQ5 1684 aa10.55□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Eif2s2Q99L45 331 aaKnown RBP10.54□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 KarsQ99MN1 595 aaKnown RBP10.54□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Naip7Q9JIB3 1402 aa10.54□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Gimap6Q8K349 305 aa10.54□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Map3k19E9Q3S4 1311 aa10.54□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Irx6Q9ER75 438 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Abca8aQ8K442 1620 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Fyb1O35601 819 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 MpripP97434 1024 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Scaf1Q5U4C3 1256 aaKnown RBP10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 PzpQ61838 1495 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 MaddQ80U28 1577 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Maco1Q7TQE6 664 aaKnown RBP10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Mroh1E0CZ22 1640 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Nectin2P32507 530 aa10.53□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Ttc37F8VPK0 1563 aa10.52□□□□□ -0.72
Sf3b1-201ENSMUST00000027127 Zranb1Q7M760 708 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ahdc1Q6PAL7 1594 aaKnown RBP10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Plcb2A3KGF7 1181 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Cavin2Q63918 418 aaKnown RBP10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Pibf1E9Q6K3 756 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Znf335A2A5K6 1337 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Hsp90b1P08113 802 aaKnown RBP10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 DekQ7TNV0 380 aaKnown RBP10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Plekhm2Q80TQ5 1018 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Gcc1Q9D4H2 778 aa10.52□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ttc21aQ8C0S4 1314 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ecm2Q5FW85 670 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Sirt1Q923E4 737 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ankrd50F7BE84 1390 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Duxf3A0A0N4SV92 674 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Sv2bQ8BG39 683 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Trim28Q62318 834 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Rad17Q6NXW6 688 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Rsph6aQ8CDR2 708 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Triml2E9PW10 424 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ccdc146E9Q9F7 977 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 TmpoQ61033 693 aaKnown RBP10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Adamts7Q68SA9 1657 aa10.51□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 DnmbpQ6TXD4 1580 aa10.5□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 TatQ8QZR1 454 aa10.5□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 4933402E13RikQ9D4D2 429 aa10.5□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Fndc1E9Q043 1732 aa10.5□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Nutm1Q8BHP2 1126 aa10.5□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 Ak9G3UYQ4 1894 aa10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 HdgfP51859 237 aaKnown RBP10.49□□□□□ -0.73
Sf3b1-201ENSMUST00000027127 MlecQ6ZQI3 291 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 22,080 RNA–protein pairs in 11.7 ms