RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 ETFBP38117 255 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 MAGEA10P43363 369 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 NME5P56597 212 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 NME3Q13232 169 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ZNF410Q86VK4 478 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 LDHDQ86WU2 507 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 HERC6Q8IVU3 1022 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 PGAM4Q8N0Y7 254 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 GLIS1Q8NBF1 620 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 DACT3Q96B18 629 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 MARK4Q96L34 752 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 CDH19Q9H159 772 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 COQ10BQ9H8M1 238 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ANKEF1Q9NU02 776 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 C4AP0C0L4 1744 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 C4BP0C0L5 1744 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 TCP10L2B9ZVM9 353 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 BTBD19C9JJ37 291 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 IDH3BO43837 385 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 RBL1P28749 1068 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 STT3AP46977 705 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 OXCT1P55809 520 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 PDK2Q15119 407 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ZBED5Q49AG3 693 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 XKR5Q6UX68 686 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 MAGEE2Q8TD90 523 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 GAB3Q8WWW8 586 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 COA1Q9GZY4 146 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 C17orf75Q9HAS0 396 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 USP29Q9HBJ7 922 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 NMRAL1Q9HBL8 299 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ZFYVE28Q9HCC9 887 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 DMAC2Q9NW81 257 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 GPATCH2LQ9NWQ4 482 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 RUVBL2Q9Y230 463 aaKnown RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 BCL9LQ86UU0 1499 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 TMEM94Q12767 1356 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 A0A088AWK7 358 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 HTR3EA5X5Y0 456 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 J3QRK9 145 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SNAP91O60641 907 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 PAX3P23760 479 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 IDH3AP50213 366 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 CDH15P55291 814 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 LAMC2Q13753 1193 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SIX1Q15475 284 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 TRIM60Q495X7 471 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SLC10A5Q5PT55 438 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 OR7A2PQ8NGA2 310 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 HELQQ8TDG4 1101 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 FBXL8Q96CD0 374 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SLC10A4Q96EP9 437 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 DEPDC7Q96QD5 511 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 SLC25A23Q9BV35 468 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 WDR55Q9H6Y2 383 aaPredicted RBP11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 ZDHHC7Q9NXF8 308 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 TUBGCP4Q9UGJ1 667 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 GNPTGQ9UJJ9 305 aa11.55□□□□□ -0.56
CRNKL1-204ENST00000490910 CCND2P30279 289 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ADAM17P78536 824 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ITKQ08881 620 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TRIM25Q14258 630 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 SNX17Q15036 470 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ZNF423Q2M1K9 1284 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 SLC35G1Q2M3R5 365 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 LDLRAP1Q5SW96 308 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 NIPAL1Q6NVV3 410 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 UBR7Q8N806 425 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ATP6V1E2Q96A05 226 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 C12orf43Q96C57 262 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 OMA1Q96E52 524 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 BDH2Q9BUT1 245 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 LRRC40Q9H9A6 602 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 NSMCE4AQ9NXX6 385 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 MEIS2O14770 477 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TIPRLO75663 272 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 DDHD2O94830 711 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 MPOP05164 745 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 RXRBP28702 533 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 MIPP30301 263 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 RGS7P49802 495 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TPTEP56180 551 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 RELAQ04206 551 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 BNIP3Q12983 259 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 POLD3Q15054 466 aaPredicted RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 TCEAL1Q15170 157 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 CYP51A1Q16850 503 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 DENND1BQ6P3S1 775 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 AKAP14Q86UN6 197 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 OSCP1Q8WVF1 389 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 EBNA1BP2Q99848 306 aaKnown RBP11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 CNPY3Q9BT09 278 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 HIPK3Q9H422 1215 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 ZNF696Q9H7X3 374 aa11.54□□□□□ -0.56
CRNKL1-204ENST00000490910 SPAG4Q9NPE6 437 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms