RNA–Protein interactions for RNA: ENST00000582406.1

BPTF-215, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-215ENST00000582406 TTLL2Q9BWV7 592 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 QTRT1Q9BXR0 403 aaKnown RBP3.41□□□□□ -1.86
BPTF-215ENST00000582406 PDGFCQ9NRA1 345 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 ABHD10Q9NUJ1 306 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 SLC52A1Q9NWF4 448 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 FNIP2Q9P278 1114 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 SLC39A10Q9ULF5 831 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 PCDHGB2Q9Y5G2 931 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 SIRT4Q9Y6E7 314 aaPredicted RBP3.41□□□□□ -1.86
BPTF-215ENST00000582406 AFF2P51816 1311 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 A2ML1A8K2U0 1454 aa3.41□□□□□ -1.86
BPTF-215ENST00000582406 SCAF11Q99590 1463 aaKnown RBP3.41□□□□□ -1.86
BPTF-215ENST00000582406 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.4□□□□□ -1.86
BPTF-215ENST00000582406 ABCC1P33527 1531 aa3.4□□□□□ -1.86
BPTF-215ENST00000582406 CCDC194A0A1B0GVG4 234 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 GOLGA6L3A6NEY3 463 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 TTC34A8MYJ7 566 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 PCDH17O14917 1159 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 CTIFO43310 598 aaKnown RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 NPHP4O75161 1426 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 USP12O75317 370 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 SRGAP2BP0DMP2 458 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 ABCB4P21439 1286 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 ATP5F1P24539 256 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 TACR3P29371 465 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 IGHMBP2P38935 993 aaKnown RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 TECP42680 631 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 RAE1P78406 368 aaKnown RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 SLC14A1Q13336 389 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 UBE4AQ14139 1066 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 CSHL1Q14406 222 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 SEC23BQ15437 767 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 CNGA3Q16281 694 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 PFKFB3Q16875 520 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 ZNF772Q68DY9 489 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 ACSM6Q6P461 480 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 DEF8Q6ZN54 512 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 PIK3AP1Q6ZUJ8 805 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 NOL8Q76FK4 1167 aaKnown RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 C16orf71Q8IYS4 520 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 OSR1Q8TAX0 266 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 MAP4K1Q92918 833 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 PRR11Q96HE9 360 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 TMEM79Q9BSE2 394 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 CFAP74Q9C0B2 1584 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 KCNK9Q9NPC2 374 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 CHST12Q9NRB3 414 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 NFU1Q9UMS0 254 aa3.4□□□□□ -1.87
BPTF-215ENST00000582406 UBE2J1Q9Y385 318 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 ARHGEF17Q96PE2 2063 aaPredicted RBP3.4□□□□□ -1.87
BPTF-215ENST00000582406 NWD1Q149M9 1564 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CCDC187A0A096LP49 1063 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 WDR91A4D1P6 747 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 FCHO1O14526 889 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 NPC1O15118 1278 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SETSIPP0DME0 302 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 NPPBP16860 134 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SFPQP23246 707 aaKnown RBP eCLIP3.39□□□□□ -1.87
BPTF-215ENST00000582406 THBS4P35443 961 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 PPM1AP35813 382 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 GHRHRQ02643 423 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CFHR1Q03591 330 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 BFSP2Q13515 415 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CBFBQ13951 182 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 TRIP6Q15654 476 aaKnown RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 FAM110CQ1W6H9 321 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 AWAT1Q58HT5 328 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SYCP2LQ5T4T6 812 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 MSANTD2Q6P1R3 559 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 XRRA1Q6P2D8 792 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SAMD3Q8N6K7 520 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 BCAS4Q8TDM0 211 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SMG7Q92540 1137 aaKnown RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 RSC1A1Q92681 617 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CUL5Q93034 780 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 RPL36ALQ969Q0 106 aaKnown RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 EIF3CQ99613 913 aaKnown RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 SENP7Q9BQF6 1050 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SH2D3AQ9BRG2 576 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SLC29A3Q9BZD2 475 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 NUAK2Q9H093 628 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CDCP1Q9H5V8 836 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 FBXO28Q9NVF7 368 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 TUBA8Q9NY65 449 aaPredicted RBP3.39□□□□□ -1.87
BPTF-215ENST00000582406 PI4KBQ9UBF8 816 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 PCDHB2Q9Y5E7 798 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 DEPDC5O75140 1603 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SPATA31A5Q5VU36 1347 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 SPATA31A7Q8IWB4 1347 aa3.39□□□□□ -1.87
BPTF-215ENST00000582406 CARMIL1Q5VZK9 1371 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 MAST1Q9Y2H9 1570 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 KIDINS220Q9ULH0 1771 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 RTEL1-TNFRSF6BF6WH68 1400 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 PNMA6EA0A0J9YXQ4 647 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 J3KTA2 159 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 FFAR2O15552 330 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 MOSPD3O75425 235 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 TAF5LO75529 589 aa3.38□□□□□ -1.87
BPTF-215ENST00000582406 SGPL1O95470 568 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms