RNA–Protein interactions for RNA: ENST00000582406.1

BPTF-215, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 3

Gene BPTF, Length 378 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-215ENST00000582406 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
BPTF-215ENST00000582406 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
BPTF-215ENST00000582406 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
BPTF-215ENST00000582406 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
BPTF-215ENST00000582406 PLPPR3Q6T4P5 718 aa13.12□□□□□ -0.31
BPTF-215ENST00000582406 FOXD1Q16676 465 aa13□□□□□ -0.33
BPTF-215ENST00000582406 PPP6R1Q9UPN7 881 aa12.47□□□□□ -0.41
BPTF-215ENST00000582406 ADRA2BP18089 450 aa12.46□□□□□ -0.41
BPTF-215ENST00000582406 PIAS4Q8N2W9 510 aaPredicted RBP12.26□□□□□ -0.45
BPTF-215ENST00000582406 MSH5O43196 834 aa12.05□□□□□ -0.48
BPTF-215ENST00000582406 PPP4R3CPQ6ZMV5 832 aa11.53□□□□□ -0.56
BPTF-215ENST00000582406 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
BPTF-215ENST00000582406 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
BPTF-215ENST00000582406 NCBP3Q53F19 620 aaKnown RBP11.27□□□□□ -0.61
BPTF-215ENST00000582406 CNKSR2Q8WXI2 1034 aa11.24□□□□□ -0.61
BPTF-215ENST00000582406 KCNA4P22459 653 aa11.22□□□□□ -0.61
BPTF-215ENST00000582406 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
BPTF-215ENST00000582406 NPM3O75607 178 aaKnown RBP11.06□□□□□ -0.64
BPTF-215ENST00000582406 RNF216Q9NWF9 866 aaPredicted RBP11.03□□□□□ -0.64
BPTF-215ENST00000582406 HOXD11P31277 338 aaPredicted RBP10.99□□□□□ -0.65
BPTF-215ENST00000582406 POTEDQ86YR6 584 aa10.93□□□□□ -0.66
BPTF-215ENST00000582406 DNAJC5BQ9UF47 199 aa10.86□□□□□ -0.67
BPTF-215ENST00000582406 SLC4A1APQ9BWU0 796 aaKnown RBP10.71□□□□□ -0.69
BPTF-215ENST00000582406 DCAF8L1A6NGE4 600 aa10.65□□□□□ -0.7
BPTF-215ENST00000582406 SLC4A2P04920 1241 aa10.44□□□□□ -0.74
BPTF-215ENST00000582406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.74
BPTF-215ENST00000582406 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
BPTF-215ENST00000582406 EHMT2Q96KQ7 1210 aa10.33□□□□□ -0.76
BPTF-215ENST00000582406 ZBTB22O15209 634 aa10.32□□□□□ -0.76
BPTF-215ENST00000582406 RNF39Q9H2S5 420 aa10.31□□□□□ -0.76
BPTF-215ENST00000582406 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
BPTF-215ENST00000582406 CSRNP3Q8WYN3 585 aa10.26□□□□□ -0.77
BPTF-215ENST00000582406 MYCNP04198 464 aaPredicted RBP10.25□□□□□ -0.77
BPTF-215ENST00000582406 C1QBPQ07021 282 aaKnown RBP10.21□□□□□ -0.77
BPTF-215ENST00000582406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.2□□□□□ -0.78
BPTF-215ENST00000582406 HNRNPUL2Q1KMD3 747 aaKnown RBP10.2□□□□□ -0.78
BPTF-215ENST00000582406 SAMD1Q6SPF0 538 aaPredicted RBP10.15□□□□□ -0.78
BPTF-215ENST00000582406 APLP2Q06481 763 aa10.11□□□□□ -0.79
BPTF-215ENST00000582406 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
BPTF-215ENST00000582406 CACNB1Q02641 598 aaPredicted RBP10.01□□□□□ -0.81
BPTF-215ENST00000582406 SPINK5Q9NQ38 1064 aaPredicted RBP9.95□□□□□ -0.82
BPTF-215ENST00000582406 ZNF219Q9P2Y4 722 aaPredicted RBP9.93□□□□□ -0.82
BPTF-215ENST00000582406 CAPN15O75808 1086 aa9.92□□□□□ -0.82
BPTF-215ENST00000582406 ATF5Q9Y2D1 282 aaPredicted RBP9.9□□□□□ -0.82
BPTF-215ENST00000582406 TRHP20396 242 aaPredicted RBP9.86□□□□□ -0.83
BPTF-215ENST00000582406 DSG3P32926 999 aa9.78□□□□□ -0.84
BPTF-215ENST00000582406 POLA2Q14181 598 aa9.71□□□□□ -0.86
BPTF-215ENST00000582406 ABCB7O75027 752 aa9.7□□□□□ -0.86
BPTF-215ENST00000582406 ZBTB12Q9Y330 459 aaPredicted RBP9.64□□□□□ -0.87
BPTF-215ENST00000582406 FBLN2P98095 1184 aa9.55□□□□□ -0.88
BPTF-215ENST00000582406 MKRN4PQ13434 485 aaPredicted RBP9.5□□□□□ -0.89
BPTF-215ENST00000582406 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
BPTF-215ENST00000582406 RBM42Q9BTD8 480 aaKnown RBP9.37□□□□□ -0.91
BPTF-215ENST00000582406 SPDYE2BA6NHP3 402 aa9.36□□□□□ -0.91
BPTF-215ENST00000582406 SPDYE6P0CI01 402 aa9.36□□□□□ -0.91
BPTF-215ENST00000582406 SPDYE2Q495Y8 402 aa9.36□□□□□ -0.91
BPTF-215ENST00000582406 SPDYE4A6NLX3 237 aa9.3□□□□□ -0.92
BPTF-215ENST00000582406 SSUH2Q9Y2M2 353 aa9.28□□□□□ -0.92
BPTF-215ENST00000582406 FKBP8Q14318 412 aa9.27□□□□□ -0.93
BPTF-215ENST00000582406 ZNF692Q9BU19 519 aaPredicted RBP9.27□□□□□ -0.93
BPTF-215ENST00000582406 AKT1S1Q96B36 256 aa9.25□□□□□ -0.93
BPTF-215ENST00000582406 PROM2Q8N271 834 aa9.19□□□□□ -0.94
BPTF-215ENST00000582406 PABPN1Q86U42 306 aaKnown RBP eCLIP9.14□□□□□ -0.95
BPTF-215ENST00000582406 REM2Q8IYK8 340 aaPredicted RBP9.12□□□□□ -0.95
BPTF-215ENST00000582406 SPDYE1Q8NFV5 336 aaPredicted RBP9.07□□□□□ -0.96
BPTF-215ENST00000582406 STAG3Q9UJ98 1225 aa9.05□□□□□ -0.96
BPTF-215ENST00000582406 PITPNM1O00562 1244 aa9.01□□□□□ -0.97
BPTF-215ENST00000582406 FBXO3Q9UK99 471 aa9.01□□□□□ -0.97
BPTF-215ENST00000582406 CLEC11AQ9Y240 323 aa8.96□□□□□ -0.98
BPTF-215ENST00000582406 CHRDL2Q6WN34 429 aa8.94□□□□□ -0.98
BPTF-215ENST00000582406 PRR29P0C7W0 189 aa8.91□□□□□ -0.98
BPTF-215ENST00000582406 FXR2P51116 673 aaKnown RBP eCLIP8.87□□□□□ -0.997e-9■■■■□ 19.7
BPTF-215ENST00000582406 VASPP50552 380 aaPredicted RBP8.86□□□□□ -0.99
BPTF-215ENST00000582406 PIP4P2Q8N4L2 257 aa8.82□□□□□ -1
BPTF-215ENST00000582406 PLEKHG5O94827 1062 aa8.8□□□□□ -1
BPTF-215ENST00000582406 MIER1Q8N108 512 aa8.8□□□□□ -1
BPTF-215ENST00000582406 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
BPTF-215ENST00000582406 CREBZFQ9NS37 354 aa8.8□□□□□ -1
BPTF-215ENST00000582406 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
BPTF-215ENST00000582406 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
BPTF-215ENST00000582406 CHADLQ6NUI6 762 aa8.73□□□□□ -1.01
BPTF-215ENST00000582406 MNX1P50219 401 aaPredicted RBP8.72□□□□□ -1.01
BPTF-215ENST00000582406 IFNLR1Q8IU57 520 aaPredicted RBP8.71□□□□□ -1.02
BPTF-215ENST00000582406 FARP1Q9Y4F1 1045 aaPredicted RBP8.71□□□□□ -1.02
BPTF-215ENST00000582406 NPM1P06748 294 aaKnown RBP eCLIP8.69□□□□□ -1.02
BPTF-215ENST00000582406 KLHL34Q8N239 644 aa8.68□□□□□ -1.02
BPTF-215ENST00000582406 POTEHQ6S545 545 aa8.67□□□□□ -1.02
BPTF-215ENST00000582406 SPOCK2Q92563 424 aa8.64□□□□□ -1.03
BPTF-215ENST00000582406 NUBP1P53384 320 aa8.6□□□□□ -1.03
BPTF-215ENST00000582406 C19orf67A6NJJ6 358 aa8.57□□□□□ -1.04
BPTF-215ENST00000582406 RASEFQ8IZ41 740 aa8.55□□□□□ -1.04
BPTF-215ENST00000582406 PAK3O75914 559 aaPredicted RBP8.54□□□□□ -1.04
BPTF-215ENST00000582406 FAM212AQ96EL1 285 aa8.54□□□□□ -1.04
BPTF-215ENST00000582406 CD44P16070 742 aaKnown RBP8.53□□□□□ -1.04
BPTF-215ENST00000582406 GSE1Q14687 1217 aa8.53□□□□□ -1.04
BPTF-215ENST00000582406 HAX1O00165 279 aa8.52□□□□□ -1.05
BPTF-215ENST00000582406 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
BPTF-215ENST00000582406 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
BPTF-215ENST00000582406 TRIM41Q8WV44 630 aa8.48□□□□□ -1.05
BPTF-215ENST00000582406 TSPYL2Q9H2G4 693 aaPredicted RBP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms