RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 KIAA1257Q9ULG3 409 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 IFT172Q9UG01 1749 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 GMFGO60234 142 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 RECQL4O94761 1208 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 YBX3P16989 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
LINC00346-201ENST00000538077 AQP5P55064 265 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CYLC2Q14093 348 aaPredicted RBP11.46□□□□□ -0.57
LINC00346-201ENST00000538077 NR6A1Q15406 480 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 GSTA3Q16772 222 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 WSCD1Q658N2 575 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 RGS18Q9NS28 235 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CYP39A1Q9NYL5 469 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CAPN6Q9Y6Q1 641 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 MYOM1P52179 1685 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 TCRBV5S4A2TA0A5A2 114 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 MAPK7Q13164 816 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 PLA2G4EQ3MJ16 856 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 USP39Q53GS9 565 aaKnown RBP11.46□□□□□ -0.57
LINC00346-201ENST00000538077 CYP4Z1Q86W10 505 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 TMEM245Q9H330 911 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 ABHD16BQ9H3Z7 469 aa11.46□□□□□ -0.57
LINC00346-201ENST00000538077 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.57
LINC00346-201ENST00000538077 RASSF10A6NK89 507 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 CYP2A6P11509 494 aaPredicted RBP11.46□□□□□ -0.58
LINC00346-201ENST00000538077 PTPRAP18433 802 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 GRK4P32298 578 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 RENBPP51606 427 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 RUNX1T1Q06455 604 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 TRIM32Q13049 653 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 PTPAQ15257 358 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 INSCQ1MX18 579 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 SNAP47Q5SQN1 464 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 KCNMB4Q86W47 210 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 CLYBLQ8N0X4 340 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 TMEM120AQ9BXJ8 343 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 ROPN1BQ9BZX4 212 aaPredicted RBP11.46□□□□□ -0.58
LINC00346-201ENST00000538077 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.58
LINC00346-201ENST00000538077 PALMDQ9NP74 551 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 KLHL20Q9Y2M5 609 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 SNX13Q9Y5W8 968 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 USP12O75317 370 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 RTN3O95197 1032 aaPredicted RBP11.46□□□□□ -0.58
LINC00346-201ENST00000538077 LSP1P33241 339 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 DLG4P78352 724 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 SEL1L3Q68CR1 1132 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 SUSD6Q92537 303 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 ERGIC2Q96RQ1 377 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 INTS13Q9NVM9 706 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 TMCC3Q9ULS5 477 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 PXDNQ92626 1479 aa11.46□□□□□ -0.58
LINC00346-201ENST00000538077 EML1O00423 815 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CXCL11O14625 94 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 IRF6O14896 467 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 RGS5O15539 181 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ABCG1P45844 678 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 NDUFV1P49821 464 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ANXA11P50995 505 aaKnown RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TGM3Q08188 693 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CAPRIN2Q6IMN6 1127 aaKnown RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TTC33Q6PID6 262 aaPredicted RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 IL1RAPL1Q9NZN1 696 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 KIF13AQ9H1H9 1805 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CHURC1-FNTBB4DL54 471 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TLL1O43897 1013 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 PFKPQ01813 784 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CRYMQ14894 314 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 KCTD19Q17RG1 926 aaPredicted RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 DEFB115Q30KQ5 88 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CES5AQ6NT32 575 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 MRPL9Q9BYD2 267 aaKnown RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ROGDIQ9GZN7 287 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 UXTQ9UBK9 157 aaPredicted RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 SPATA31D1Q6ZQQ2 1576 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TIMM44O43615 452 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 OR56A5P0C7T3 313 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 UMPSP11172 480 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 MPP3Q13368 585 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 LRRC8DQ7L1W4 858 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 OTOP1Q7RTM1 612 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 GPR142Q7Z601 462 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 AGGF1Q8N302 714 aaeCLIP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ATP6V1HQ9UI12 483 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TRAV19A0A0A6YYK7 116 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 E5RJQ4 531 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 SEC22BO75396 215 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 NOS3P29474 1203 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 ELAVL2Q12926 359 aaKnown RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TREML2Q5T2D2 321 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 NETO2Q8NC67 525 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 COL26A1Q96A83 441 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 POMKQ9H5K3 350 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 TMPRSS4Q9NRS4 437 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 COL5A2P05997 1499 aaPredicted RBP11.45□□□□□ -0.58
LINC00346-201ENST00000538077 NFASCO94856 1347 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 BTN3A1O00481 513 aa11.45□□□□□ -0.58
LINC00346-201ENST00000538077 HMGCRP04035 888 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms