RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 L1RE1Q9UN81 338 aa15.22■□□□□ 0.03
USP11-207ENST00000478596 STARD13Q9Y3M8 1113 aa15.22■□□□□ 0.03
USP11-207ENST00000478596 PCDHGA1Q9Y5H4 931 aa15.22■□□□□ 0.03
USP11-207ENST00000478596 FHOD1Q9Y613 1164 aa15.22■□□□□ 0.03
USP11-207ENST00000478596 MEI4A8MW99 385 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 ADCY5O95622 1261 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 CDK4P11802 303 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 JUPP14923 745 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 CD6P30203 668 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 ASPAP45381 313 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 MCCD1P59942 119 aaPredicted RBP15.21■□□□□ 0.03
USP11-207ENST00000478596 SLC7A9P82251 487 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 TRIM14Q14142 442 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 NR1I3Q14994 352 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 CCDC157Q569K6 752 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 COLEC12Q5KU26 742 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 WSCD1Q658N2 575 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 SPECC1LQ69YQ0 1117 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 ENOSF1Q7L5Y1 443 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 ETFBKMTQ8IXQ9 262 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 TMEM86AQ8N2M4 240 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 TATDN2Q93075 761 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 MRGPRX1Q96LB2 322 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 ARID3AQ99856 593 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 VRTNQ9H8Y1 702 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 CYP3A43Q9HB55 503 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 CD93Q9NPY3 652 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 PLCB1Q9NQ66 1216 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 DNAJC12Q9UKB3 198 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 SIK3Q9Y2K2 1263 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 PCDHB4Q9Y5E5 795 aa15.21■□□□□ 0.03
USP11-207ENST00000478596 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.21■□□□□ 0.03
USP11-207ENST00000478596 KNTC1P50748 2209 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 A8MXQ7 604 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 PCDHGA12O60330 932 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 NCAM1P13591 858 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 UCHL3P15374 230 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 TSPY1Q01534 308 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 GCNT1Q02742 428 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 KLHDC7AQ5VTJ3 777 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 NUDT18Q6ZVK8 323 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 METTL3Q86U44 580 aaKnown RBP15.2■□□□□ 0.02
USP11-207ENST00000478596 MIB1Q86YT6 1006 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 PDCL2Q8N4E4 241 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 TTC39CQ8N584 583 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 ZNF397Q8NF99 534 aaPredicted RBP15.2■□□□□ 0.02
USP11-207ENST00000478596 C1orf216Q8TAB5 229 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 IQCDQ96DY2 449 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 GABRG3Q99928 467 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 NUP58Q9BVL2 599 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 MIR1-1HGQ9H1L0 117 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 GMIPQ9P107 970 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
USP11-207ENST00000478596 ITIH6Q6UXX5 1313 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 CYP2F1P24903 491 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 PCSK1P29120 753 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 LHX1P48742 406 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 CDH8P55286 799 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 KCNMA1Q12791 1236 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 LY6DQ14210 128 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 SOWAHAQ2M3V2 549 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 ZNF394Q53GI3 561 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 C10orf76Q5T2E6 689 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 TMEM270Q6UE05 265 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 DPH6Q7L8W6 267 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 VSTM4Q8IW00 320 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 TERB1Q8NA31 727 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 LMO3Q8TAP4 145 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 CPLX3Q8WVH0 158 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 KAT5Q92993 513 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 MED8Q96G25 268 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 TOE1Q96GM8 510 aaKnown RBP15.19■□□□□ 0.02
USP11-207ENST00000478596 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
USP11-207ENST00000478596 GANQ9H2C0 597 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 SIX2Q9NPC8 291 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 CISHQ9NSE2 258 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
USP11-207ENST00000478596 WSB2Q9NYS7 404 aaPredicted RBP15.19■□□□□ 0.02
USP11-207ENST00000478596 DEC1Q9P2X7 70 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 IL17BQ9UHF5 180 aa15.19■□□□□ 0.02
USP11-207ENST00000478596 TULP3O75386 442 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 OLFM2O95897 454 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 PDGFRBP09619 1106 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 C1SP09871 688 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 CD19P15391 556 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 WARSP23381 471 aaKnown RBP15.18■□□□□ 0.02
USP11-207ENST00000478596 ACAT1P24752 427 aaKnown RBP15.18■□□□□ 0.02
USP11-207ENST00000478596 ACTN2P35609 894 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 WASP42768 502 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 NDST1P52848 882 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 UCNP55089 124 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 GAD2Q05329 585 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 CCDC173Q0VFZ6 552 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 TARDBPQ13148 414 aaKnown RBP eCLIP15.18■□□□□ 0.02
USP11-207ENST00000478596 ORC1Q13415 861 aa15.18■□□□□ 0.02
USP11-207ENST00000478596 TSR1Q2NL82 804 aaKnown RBP15.18■□□□□ 0.02
USP11-207ENST00000478596 CFAP221Q4G0U5 840 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms