RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 SKA1Q96BD8 255 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
ATXN3-201ENST00000340660 CCDC94Q9BW85 323 aaPredicted RBP11.88□□□□□ -0.51
ATXN3-201ENST00000340660 RNF38Q9H0F5 515 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 RGL1Q9NZL6 768 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 ZFATQ9P243 1243 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 VAV3Q9UKW4 847 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 DDX19BQ9UMR2 479 aa11.88□□□□□ -0.51
ATXN3-201ENST00000340660 SHANK1Q9Y566 2161 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 A0A1W2PPC4 97 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 C4BPAP04003 597 aaKnown RBP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 SDSP20132 328 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 CD38P28907 300 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 ARSDP51689 593 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 MRPL49Q13405 166 aaKnown RBP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 NOLC1Q14978 699 aaKnown RBP eCLIP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 SMTNL2Q2TAL5 461 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 ANO4Q32M45 955 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 Q4G0T1 1027 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 CWC27Q6UX04 472 aaKnown RBP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 SPATS2Q86XZ4 545 aaKnown RBP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 JAMLQ86YT9 394 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 OR4C6Q8NH72 309 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 CPT1CQ8TCG5 803 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 CDT1Q9H211 546 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 ERVMER34-1Q9H9K5 563 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 TMLHEQ9NVH6 421 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 SEPT10Q9P0V9 454 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 PHTF1Q9UMS5 762 aa11.87□□□□□ -0.51
ATXN3-201ENST00000340660 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
ATXN3-201ENST00000340660 CCDC187A0A096LP49 1063 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 PPEF2O14830 753 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 CASC3O15234 703 aaKnown RBP11.86□□□□□ -0.51
ATXN3-201ENST00000340660 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
ATXN3-201ENST00000340660 MAP3K6O95382 1288 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 TDP2O95551 362 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 PDE6CP51160 858 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 ENPP2Q13822 863 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 RALYLQ86SE5 291 aaKnown RBP11.86□□□□□ -0.51
ATXN3-201ENST00000340660 MB21D2Q8IYB1 491 aaPredicted RBP11.86□□□□□ -0.51
ATXN3-201ENST00000340660 FSIP1Q8NA03 581 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 FANCBQ8NB91 859 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 NACC1Q96RE7 527 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 BTBD1Q9H0C5 482 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 C6orf50Q9HD87 102 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 SPHK2Q9NRA0 654 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 AASDHPPTQ9NRN7 309 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 TPSG1Q9NRR2 321 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 PPM1HQ9ULR3 514 aa11.86□□□□□ -0.51
ATXN3-201ENST00000340660 ARHGEF17Q96PE2 2063 aaPredicted RBP11.85□□□□□ -0.51
ATXN3-201ENST00000340660 K7EM74 188 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 TLR4O00206 839 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 HIP1O00291 1037 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 OLFM2O95897 454 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 CYP21A2P08686 494 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 GIMD1P0DJR0 217 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 LRPAP1P30533 357 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 ZNF132P52740 706 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 PPP2R5CQ13362 524 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 CTTNQ14247 550 aaKnown RBP11.85□□□□□ -0.51
ATXN3-201ENST00000340660 KIAA0895LQ68EN5 471 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 RBM44Q6ZP01 1051 aaKnown RBP11.85□□□□□ -0.51
ATXN3-201ENST00000340660 MAEAQ7L5Y9 396 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 ZFAND4Q86XD8 727 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 XYLT1Q86Y38 959 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 OXR1Q8N573 874 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 NCOA7Q8NI08 942 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 IFI44Q8TCB0 444 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 DYDC2Q96IM9 177 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 SENP8Q96LD8 212 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 APOLD1Q96LR9 279 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 ZMYND12Q9H0C1 365 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 C2orf40Q9H1Z8 148 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 LHX5Q9H2C1 402 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 PRDM8Q9NQV8 689 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 UCKL1Q9NWZ5 548 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 TBC1D14Q9P2M4 693 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 LRWD1Q9UFC0 647 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
ATXN3-201ENST00000340660 E7EWF7 191 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 SH2B2O14492 632 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-201ENST00000340660 PLD2O14939 933 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 FFAR2O15552 330 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 ANP32CO43423 234 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 CACNG3O60359 315 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 ODC1P11926 461 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 SMARCB1Q12824 385 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 NKAPLQ5M9Q1 402 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 DTX1Q86Y01 620 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 ADGRF2Q8IZF7 708 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 ZNF276Q8N554 614 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 TEX19Q8NA77 164 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 IFT43Q96FT9 208 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
ATXN3-201ENST00000340660 CAAP1Q9H8G2 361 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 PCDHB5Q9Y5E4 795 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 JMJD1CQ15652 2540 aa11.84□□□□□ -0.51
ATXN3-201ENST00000340660 RTTNQ86VV8 2226 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms