RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 CFAP221Q4G0U5 840 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 DENND5BQ6ZUT9 1274 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 CACUL1Q86Y37 369 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 BBS7Q8IWZ6 715 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 EXTL1Q92935 676 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 SKA1Q96BD8 255 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 BIRC7Q96CA5 298 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 FUBP3Q96I24 572 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC00396-201ENST00000411690 SPATA17Q96L03 361 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 SEMA3CQ99985 751 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 CCSER1Q9C0I3 900 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 ETNK1Q9HBU6 452 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 ASCL3Q9NQ33 180 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 DDX43Q9NXZ2 648 aaKnown RBP6.74□□□□□ -1.33
LINC00396-201ENST00000411690 EHD2Q9NZN4 543 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 CREBBPQ92793 2442 aa6.74□□□□□ -1.33
LINC00396-201ENST00000411690 SFI1A8K8P3 1242 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 NPC1O15118 1278 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 YKT6O15498 198 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 CACNG3O60359 315 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 TSPAN3O60637 253 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 HIP1RO75146 1068 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 PPFIA2O75334 1257 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 FSBPO95073 299 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 FAM87AP0C7U9 286 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 TYRP14679 529 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 MUTP22033 750 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 ANXA13P27216 316 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 RBMS1P29558 406 aaKnown RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 MAGEA11P43364 429 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 ARRB1P49407 418 aaPredicted RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 COPAP53621 1224 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 BCAT1P54687 386 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 GRIN1Q05586 938 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 LRP8Q14114 963 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 IGFBP7Q16270 282 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 SV2CQ496J9 727 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 CPLX2Q6PUV4 134 aaKnown RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 BLOC1S2Q6QNY1 142 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 USP53Q70EK8 1073 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 DAW1Q8N136 415 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 FBXL16Q8N461 479 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 PDCL2Q8N4E4 241 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 NSUN7Q8NE18 718 aaKnown RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 BICD1Q96G01 975 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 CEP295NLQ96MC4 621 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 DEPDC7Q96QD5 511 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 CCNL2Q96S94 520 aaPredicted RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 BBS2Q9BXC9 721 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 AGXT2Q9BYV1 514 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 C17orf75Q9HAS0 396 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 DPP3Q9NY33 737 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 MAGEC2Q9UBF1 373 aaPredicted RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 PLEKHB1Q9UF11 243 aaPredicted RBP6.73□□□□□ -1.33
LINC00396-201ENST00000411690 LRWD1Q9UFC0 647 aa6.73□□□□□ -1.33
LINC00396-201ENST00000411690 DOPEY1Q5JWR5 2465 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 OGTO15294 1046 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 HUS1O60921 280 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 SEMA4FO95754 770 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 EPHA8P29322 1005 aaPredicted RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 SMTNP53814 917 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 CDH8P55286 799 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 ASIC1P78348 528 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TAF10Q12962 218 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 BNIP3Q12983 259 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TLR1Q15399 786 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 ECM1Q16610 540 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 CCDC142Q17RM4 750 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 ZNF468Q5VIY5 522 aaPredicted RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TDRD10Q5VZ19 366 aaKnown RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 IGF2-ASQ6U949 168 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 VSTM1Q6UX27 236 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 C4orf50Q6ZRC1 276 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TPGS1Q6ZTW0 290 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 NLRP8Q86W28 1048 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 UCMAQ8WVF2 138 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 JAKMIP1Q96N16 626 aaKnown RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 SLC46A1Q96NT5 459 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 SLITRK1Q96PX8 696 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 PKMYT1Q99640 499 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 DUSP9Q99956 384 aaKnown RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TTLL2Q9BWV7 592 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 TRIM9Q9C026 710 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 BTBD1Q9H0C5 482 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 SLC25A18Q9H1K4 315 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 GDF3Q9NR23 364 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 GJB4Q9NTQ9 266 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 WDR35Q9P2L0 1181 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 THAP10Q9P2Z0 257 aaPredicted RBP6.72□□□□□ -1.33
LINC00396-201ENST00000411690 KCNG1Q9UIX4 513 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 DERAQ9Y315 318 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 NOTCH2Q04721 2471 aa6.72□□□□□ -1.33
LINC00396-201ENST00000411690 EFSO43281 561 aa6.71□□□□□ -1.34
LINC00396-201ENST00000411690 COCHO43405 550 aa6.71□□□□□ -1.34
LINC00396-201ENST00000411690 FAM189A1O60320 539 aa6.71□□□□□ -1.34
LINC00396-201ENST00000411690 CSO75390 466 aaKnown RBP6.71□□□□□ -1.34
LINC00396-201ENST00000411690 GJB6O95452 261 aa6.71□□□□□ -1.34
LINC00396-201ENST00000411690 CISD3P0C7P0 127 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms