RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 HMGB3O15347 200 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 LEMD2Q8NC56 503 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 PRKAG3Q9UGI9 489 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 ZDHHC9Q9Y397 364 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 HDAC2Q92769 488 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 PBRM1Q86U86 1689 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 PRKCBP05771 671 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 PTDSS1P48651 473 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 NRG3P56975 720 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 TOR1AIP2Q8NFQ8 470 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SLC9A6Q92581 669 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CHRNGP07510 517 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SFNP31947 248 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 USP11P51784 963 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 WDR72Q3MJ13 1102 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 TIMM50Q3ZCQ8 353 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 BHLHB9Q6PI77 547 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 ZNF512Q96ME7 567 aaPredicted RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 INTS10Q9NVR2 710 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 OGDHLQ9ULD0 1010 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 KIF20BQ96Q89 1820 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 A0A0G2JPF8 293 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 HNRNPCL3B7ZW38 293 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 NOS1APO75052 506 aaPredicted RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 HNRNPCL4P0DMR1 293 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 MAGP20916 626 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 RAB2AP61019 212 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 TC2NQ8N9U0 490 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 MYDGFQ969H8 173 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CAB39LQ9H9S4 337 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 ZNF221Q9UK13 617 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 L1RE1Q9UN81 338 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SPTLC1O15269 473 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 NUMBP49757 651 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 HNRNPLLQ8WVV9 542 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 TBCDQ9BTW9 1192 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
CHFR-201ENST00000266880 GJB7Q6PEY0 223 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 SPIRE2Q8WWL2 714 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 MARK4Q96L34 752 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CLEC4AQ9UMR7 237 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 COG5Q9UP83 839 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CFAP74Q9C0B2 1584 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 FAM172BPA6NC97 362 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 FAM220AQ7Z4H9 259 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 ERO1BQ86YB8 467 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 CROTQ9UKG9 612 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 AGAP1Q9UPQ3 857 aa11.42□□□□□ -0.58
CHFR-201ENST00000266880 FSBPO95073 299 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 GHRP10912 638 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 FDFT1P37268 417 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 PREPLQ4J6C6 727 aaPredicted RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 C12orf50Q8NA57 414 aaPredicted RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 UBA3Q8TBC4 463 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 DNAAF2Q9NVR5 837 aaKnown RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 FEM1BQ9UK73 627 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 A0A0X1KG70 313 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 CPA3P15088 417 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ITGB6P18564 788 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 GTF2H1P32780 548 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ST8SIA6P61647 398 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 CSHL1Q14406 222 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ERFEQ4G0M1 354 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ENOPH1Q9UHY7 261 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 RP1L1Q8IWN7 2480 aaPredicted RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 PRKAR2AP13861 404 aaKnown RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 ALDH1A3P47895 512 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 GLRA4Q5JXX5 417 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 TMPRSS6Q8IU80 811 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 OTUD5Q96G74 571 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ZSWIM1Q9BR11 485 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ALG6Q9Y672 507 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ERVV-2B6SEH9 535 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ALDH1A1P00352 501 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 KCNJ6P48051 423 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 SMCO1Q147U7 214 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 SNX17Q15036 470 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 GPR107Q5VW38 600 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 MAP3K6O95382 1288 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ZBTB11O95625 1053 aaPredicted RBP11.41□□□□□ -0.58
CHFR-201ENST00000266880 HAUS6Q7Z4H7 955 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ZNF276Q8N554 614 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 FEZF2Q8TBJ5 459 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 EPB41L4BQ9H329 900 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 WDR35Q9P2L0 1181 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 SPACA6W5XKT8 324 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 IFI30P13284 250 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 MAGEA8P43361 318 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 CACNB3P54284 484 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 CDK20Q8IZL9 346 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 MYLPFQ96A32 169 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 COX4I2Q96KJ9 171 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 TRPV5Q9NQA5 729 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 HAT1O14929 419 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 ZSWIM2Q8NEG5 633 aa11.41□□□□□ -0.58
CHFR-201ENST00000266880 REEP1Q9H902 201 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms