RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 PRDM16Q9HAZ2 1276 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CYP4F12Q9HCS2 524 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KCNQ5Q9NR82 932 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 IL17RBQ9NRM6 502 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MAP10Q9P2G4 905 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 VTI1BQ9UEU0 232 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 TMCC3Q9ULS5 477 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 LACTBL1A8MY62 500 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CXCL11O14625 94 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 RIPK2O43353 540 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CAPN15O75808 1086 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 FCGR1AP12314 374 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PEX5P50542 639 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CHRNB3Q05901 458 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ADIGQ0VDE8 80 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KCNMA1Q12791 1236 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MPP3Q13368 585 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 RCN1Q15293 331 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KAT2BQ92831 832 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KLHL4Q9C0H6 718 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PALMDQ9NP74 551 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 EXOSC4Q9NPD3 245 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 IMPAD1Q9NX62 359 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 TRHDEQ9UKU6 1024 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PRR23AA6NEV1 266 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 VPS4BO75351 444 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MAP3K6O95382 1288 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CKMP06732 381 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 INSRRP14616 1297 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ZNF23P17027 643 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PMS1P54277 932 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 CDH17Q12864 832 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 NTRK3Q16288 839 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 OVOS1Q6IE37 1185 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 VCPIP1Q96JH7 1222 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SERAC1Q96JX3 654 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 UROC1Q96N76 676 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SERPINB11Q96P15 392 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 TBCBQ99426 244 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 MRPL9Q9BYD2 267 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 NLNQ9BYT8 704 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ZNF711Q9Y462 761 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 RASSF9O75901 435 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SLITRK3O94933 977 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 HNRNPCP07910 306 aaKnown RBP eCLIP8.7□□□□□ -1.029e-7■■■■□ 20.8
CTNND1-227ENST00000530748 DARSP14868 501 aaKnown RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 TAL1P17542 331 aaPredicted RBP8.7□□□□□ -1.02
CTNND1-227ENST00000530748 HALP42357 657 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PSEN2P49810 448 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SLC16A1P53985 500 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 PSMC6P62333 389 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 NT5DC1Q5TFE4 455 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 OTOP1Q7RTM1 612 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 KCNMB4Q86W47 210 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ZNF786Q8N393 782 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 INPP5DQ92835 1189 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 REPS1Q96D71 796 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 COMMD8Q9NX08 183 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 SYNPO2Q9UMS6 1093 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 ACOT9Q9Y305 439 aa8.7□□□□□ -1.02
CTNND1-227ENST00000530748 IFRD1O00458 451 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 POMCP01189 267 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 DDX39BQ13838 428 aaKnown RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 KPNB1Q14974 876 aaKnown RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 PLCL1Q15111 1095 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 NFE2Q16621 373 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 LUZP2Q86TE4 346 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 NT5DC3Q86UY8 548 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 PHACTR4Q8IZ21 702 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 KRT78Q8N1N4 520 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 MIER2Q8N344 545 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 EMC1Q8N766 993 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 RIN3Q8TB24 985 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 VPS33AQ96AX1 596 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 CAAP1Q9H8G2 361 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 L2HGDHQ9H9P8 463 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 PADI4Q9UM07 663 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 KLHL20Q9Y2M5 609 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 STARD13Q9Y3M8 1113 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 H3BRB1 525 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 DNALI1O14645 258 aaPredicted RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 CCNT2O60583 730 aaKnown RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 JCHAINP01591 159 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 CYP3A4P08684 503 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 AKAP5P24588 427 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 RXRGP48443 463 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 CD151P48509 253 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 CORO7P57737 925 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 TLK2Q86UE8 772 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 PRKD2Q9BZL6 878 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
CTNND1-227ENST00000530748 RRAGCQ9HB90 399 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 NMRAL1Q9HBL8 299 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 NCKIPSDQ9NZQ3 722 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 ARHGAP20Q9P2F6 1191 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 POLG2Q9UHN1 485 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 PCDHA3Q9Y5H8 950 aa8.69□□□□□ -1.02
CTNND1-227ENST00000530748 MROH7Q68CQ1 1323 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms