RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ARHGAP15Q53QZ3 475 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 TFAP2DQ7Z6R9 452 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 GLMPQ8WWB7 406 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 CUL5Q93034 780 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 TM2D2Q9BX73 214 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 MLXIPLQ9NP71 852 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 TM7SF3Q9NS93 570 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 TRNAU1APQ9NX07 287 aaKnown RBP5.71□□□□□ -1.5
CCDC66-219ENST00000484441 ELOVL5Q9NYP7 299 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 AFG3L2Q9Y4W6 797 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 ZNF521Q96K83 1311 aa5.71□□□□□ -1.5
CCDC66-219ENST00000484441 PRYO14603 147 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 ADAM10O14672 748 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
CCDC66-219ENST00000484441 CTIFO43310 598 aaKnown RBP5.7□□□□□ -1.5
CCDC66-219ENST00000484441 CTSAP10619 480 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 MMP8P22894 467 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 YY1P25490 414 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 NR4A2P43354 598 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 HSPA7P48741 367 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 RPS13P62277 151 aaKnown RBP5.7□□□□□ -1.5
CCDC66-219ENST00000484441 CCDC181Q5TID7 509 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 CCDC144NLQ6NUI1 221 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 ACSM6Q6P461 480 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 OR52L2PQ8NGH6 319 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 PARD3BQ8TEW8 1205 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 GRAMD1AQ96CP6 724 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 SGCZQ96LD1 299 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 FCRL5Q96RD9 977 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 PAAF1Q9BRP4 392 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.7□□□□□ -1.5
CCDC66-219ENST00000484441 KCNK9Q9NPC2 374 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 MTMR4Q9NYA4 1195 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 PI4KBQ9UBF8 816 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 PCDHB2Q9Y5E7 798 aa5.7□□□□□ -1.5
CCDC66-219ENST00000484441 ZMYM2Q9UBW7 1377 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 CCDC187A0A096LP49 1063 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 LY6G6EA0A0G2JKS1 128 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 INPPL1O15357 1258 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 GLP2RO95838 553 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 PLAUP00749 431 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 NBPF7P0C2Y1 421 aaPredicted RBP5.69□□□□□ -1.5
CCDC66-219ENST00000484441 NDUFS1P28331 727 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 HOXD12P35452 270 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 IDUAP35475 653 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 ID2Q02363 134 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 SEMA3BQ13214 749 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 GAB1Q13480 694 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 PICALMQ13492 652 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 TWIST1Q15672 202 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 CNGA3Q16281 694 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 FAM110CQ1W6H9 321 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 DGKKQ5KSL6 1271 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 PXDC1Q5TGL8 231 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 ARL6IP4Q66PJ3 421 aaKnown RBP5.69□□□□□ -1.5
CCDC66-219ENST00000484441 IL31Q6EBC2 164 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 MRPL10Q7Z7H8 261 aaKnown RBP5.69□□□□□ -1.5
CCDC66-219ENST00000484441 DEPTORQ8TB45 409 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 BCAS4Q8TDM0 211 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 AKAP1Q92667 903 aaKnown RBP eCLIP5.69□□□□□ -1.5
CCDC66-219ENST00000484441 ZNF566Q969W8 418 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 CCDC138Q96M89 665 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 STK33Q9BYT3 514 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 CDCP1Q9H5V8 836 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 FSCN3Q9NQT6 498 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 FNIP2Q9P278 1114 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 SPATA31A5Q5VU36 1347 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 SPATA31A7Q8IWB4 1347 aa5.69□□□□□ -1.5
CCDC66-219ENST00000484441 M0QZQ0 153 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 PODXLO00592 558 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 PCDH17O14917 1159 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 PLA2G6O60733 806 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 ZNF84P51523 738 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 NEK3P51956 506 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 BFSP2Q13515 415 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 RABEP1Q15276 862 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 RBMS2Q15434 407 aaKnown RBP5.68□□□□□ -1.5
CCDC66-219ENST00000484441 RAB30Q15771 203 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 MSANTD2Q6P1R3 559 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 SHC4Q6S5L8 630 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 KYAT3Q6YP21 454 aaKnown RBP5.68□□□□□ -1.5
CCDC66-219ENST00000484441 RFX6Q8HWS3 928 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 C16orf71Q8IYS4 520 aaPredicted RBP5.68□□□□□ -1.5
CCDC66-219ENST00000484441 ASB12Q8WXK4 309 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 GJA10Q969M2 543 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 KIAA1191Q96A73 305 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 ZNF845Q96IR2 970 aaPredicted RBP5.68□□□□□ -1.5
CCDC66-219ENST00000484441 CERS4Q9HA82 394 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 HELLSQ9NRZ9 838 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 ARL8BQ9NVJ2 186 aa5.68□□□□□ -1.5
CCDC66-219ENST00000484441 C2CD4BA6NLJ0 364 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 SOCS2O14508 198 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 NTSR2O95665 410 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 PRF1P14222 555 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 RPS6KB1P23443 525 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 HOXA7P31268 230 aaPredicted RBP5.67□□□□□ -1.5
CCDC66-219ENST00000484441 GSTM5P46439 218 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 ZNF91Q05481 1191 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 SLC9C1Q4G0N8 1177 aa5.67□□□□□ -1.5
CCDC66-219ENST00000484441 EARS2Q5JPH6 523 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms