RNA–Protein interactions for RNA: ENST00000577578.5

CSNK1D-206, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 928 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-206ENST00000577578 ACDQ96AP0 544 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 NCDNQ9UBB6 729 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 SLC8A2Q9UPR5 921 aa13.1□□□□□ -0.31
CSNK1D-206ENST00000577578 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 O00370 1275 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 XPO1O14980 1071 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 PAEPP09466 180 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 PLA2G4AP47712 749 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 BCAT1P54687 386 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 SLC8A3P57103 927 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 GCNT1Q02742 428 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 GAD2Q05329 585 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 CETN1Q12798 172 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 KCNH2Q12809 1159 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 LRMPQ12912 555 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 SIM2Q14190 667 aaPredicted RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 SGO2Q562F6 1265 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 HEATR6Q6AI08 1181 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 Q6ZNB5 142 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 BHLHA9Q7RTU4 235 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 TADA2BQ86TJ2 420 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 SECISBP2LQ93073 1101 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 NT5C1BQ96P26 610 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 MED15Q96RN5 788 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 CDK5RAP1Q96SZ6 601 aaKnown RBP13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 PNKPQ96T60 521 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 SPHK2Q9NRA0 654 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 MARK1Q9P0L2 795 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 EBF1Q9UH73 591 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 RWDD2AQ9UIY3 292 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 DNMT3LQ9UJW3 386 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 NAGPAQ9UK23 515 aa13.09□□□□□ -0.31
CSNK1D-206ENST00000577578 TULP2O00295 520 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 KAT7O95251 611 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 RETP07949 1114 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 SETSIPP0DME0 302 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 RALAP11233 206 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 VDRP11473 427 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 GRIA2P42262 883 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 KIR2DL1P43626 348 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 SLC6A11P48066 632 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 ZNF132P52740 706 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 STX17P56962 302 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 MRPS21P82921 87 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 PDE4CQ08493 712 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 GOLGA8FQ08AF8 430 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 GOLGA8DPQ0D2H9 430 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 BST2Q10589 180 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 SRSF5Q13243 272 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 DMC1Q14565 340 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 CAMK4Q16566 473 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 GOLGA7BQ2TAP0 167 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 C10orf120Q5SQS8 335 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 LCLAT1Q6UWP7 414 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 CLEC17AQ6ZS10 378 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 TMEM25Q86YD3 366 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 KIAA2013Q8IYS2 634 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 SCML4Q8N228 414 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 ARHGAP18Q8N392 663 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 EHBP1Q8NDI1 1231 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 GAB3Q8WWW8 586 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 KCTD13Q8WZ19 329 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 KAT5Q92993 513 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 IPO9Q96P70 1041 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 HINFPQ9BQA5 517 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 POLR3BQ9NW08 1133 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 RAB23Q9ULC3 237 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 CNTN6Q9UQ52 1028 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 LAMA1P25391 3075 aa13.08□□□□□ -0.32
CSNK1D-206ENST00000577578 PLXND1Q9Y4D7 1925 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 ANTXRLA6NF34 631 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 RNF225M0QZC1 329 aaPredicted RBP13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 MDM4O15151 490 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 CACNG3O60359 315 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 LRP3O75074 770 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 TULP3O75386 442 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 STC2O76061 302 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 APBB3O95704 486 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 ZBED1O96006 694 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 APODP05090 189 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 CCDC192P0DO97 292 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 IRF1P10914 325 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 TNFRSF4P43489 277 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 TKTL1P51854 596 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 TMEM270Q6UE05 265 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 RASSF3Q86WH2 238 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 SFTPA1Q8IWL2 248 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 PPM1KQ8N3J5 372 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 KCNV2Q8TDN2 545 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 SLC35F5Q8WV83 523 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 TFAP2BQ92481 460 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 HHIPQ96QV1 700 aa13.07□□□□□ -0.32
CSNK1D-206ENST00000577578 ZSWIM1Q9BR11 485 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms