RNA–Protein interactions for RNA: ENST00000557355.1

LINC01146-208, Transcript of long intergenic non-protein coding RNA 1146, human

TSL 4 BASIC

Gene LINC01146, Length 548 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01146-208	ENST00000557355	NDRG4	Q9ULP0	352 aa	Known RBP	4.7	□□□□□ -1.66
LINC01146-208	ENST00000557355	AKAP12	Q02952	1782 aa		4.7	□□□□□ -1.66
LINC01146-208	ENST00000557355	YTHDC2	Q9H6S0	1430 aa	Known RBP	4.7	□□□□□ -1.66
LINC01146-208	ENST00000557355	SHPRH	Q149N8	1683 aa		4.7	□□□□□ -1.66
LINC01146-208	ENST00000557355	NWD1	Q149M9	1564 aa		4.7	□□□□□ -1.66
LINC01146-208	ENST00000557355	PARD3	Q8TEW0	1356 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	C4orf47	A7E2U8	309 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	CNOT3	O75175	753 aa	Known RBP	4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	UAP1L1	Q3KQV9	507 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	ANKRD13B	Q86YJ7	626 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.69	□□□□□ -1.66	4e-9	■■■□□ 16.6
LINC01146-208	ENST00000557355	CAMK1G	Q96NX5	476 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	MMS19	Q96T76	1030 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	SLC52A1	Q9NWF4	448 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	ASIC5	Q9NY37	505 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	PTCH1	Q13635	1447 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	ADAMTS13	Q76LX8	1427 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	CDC42BPG	Q6DT37	1551 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	MED14	O60244	1454 aa		4.69	□□□□□ -1.66
LINC01146-208	ENST00000557355	TMEM2	Q9UHN6	1383 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	CCER2	I3L3R5	266 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	XPOT	O43592	962 aa	Known RBP	4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	IGSF3	O75054	1194 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	IARS	P41252	1262 aa	Known RBP	4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	E2F1	Q01094	437 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	AMOT	Q4VCS5	1084 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	C4orf46	Q504U0	113 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	ZNF585B	Q52M93	769 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	ANO7	Q6IWH7	933 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	PELI3	Q8N2H9	469 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	CNTD1	Q8N815	330 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	ATL2	Q8NHH9	583 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	PNISR	Q8TF01	805 aa	Known RBP	4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	FAXDC2	Q96IV6	333 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	ZFYVE19	Q96K21	471 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	MOGAT1	Q96PD6	335 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	MLXIP	Q9HAP2	919 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	SERPINB13	Q9UIV8	391 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	ATP7B	P35670	1465 aa		4.68	□□□□□ -1.66
LINC01146-208	ENST00000557355	USP54	Q70EL1	1684 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	KTN1	Q86UP2	1357 aa	Known RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PLEKHG1	Q9ULL1	1385 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	FMN2	Q9NZ56	1722 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	AP4M1	O00189	453 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	ANP32C	O43423	234 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA12	O60330	932 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	CENPB	P07199	599 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PDE6C	P51160	858 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	FHL3	Q13643	280 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	IDI1	Q13907	227 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	CYP1B1	Q16678	543 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	DEPDC1	Q5TB30	811 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	CBARP	Q8N350	705 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	OSCP1	Q8WVF1	389 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	ZPBP	Q9BS86	351 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	ABCF2	Q9UG63	623 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	FEZ2	Q9UHY8	353 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA9	Q9Y5G4	932 aa	Known RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA8	Q9Y5G5	932 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA7	Q9Y5G6	932 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA6	Q9Y5G7	932 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	PCDHGA3	Q9Y5H0	932 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	CD163L1	Q9NR16	1453 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	CENPJ	Q9HC77	1338 aa	Predicted RBP	4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	TTC3	P53804	2025 aa		4.67	□□□□□ -1.66
LINC01146-208	ENST00000557355	LRPPRC	P42704	1394 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	NINL	Q9Y2I6	1382 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	BLM	P54132	1417 aa	Predicted RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	FAM135B	Q49AJ0	1406 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	NSD3	Q9BZ95	1437 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	LACTBL1	A8MY62	500 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	MT-CO1	P00395	513 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	HMGB1	P09429	215 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	CNGA1	P29973	690 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	THBS4	P35443	961 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	THEMIS2	Q5TEJ8	643 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	HEATR3	Q7Z4Q2	680 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	CAND1	Q86VP6	1230 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	LIX1L	Q8IVB5	337 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	SFTPA1	Q8IWL2	248 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	MPLKIP	Q8TAP9	179 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	TEKT5	Q96M29	485 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	PUS7L	Q9H0K6	701 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	PRKRIP1	Q9H875	184 aa	Predicted RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	TRMT13	Q9NUP7	481 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	AMFR	Q9UKV5	643 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	SHOC2	Q9UQ13	582 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	NKTR	P30414	1462 aa	Known RBP	4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	LRRC7	Q96NW7	1537 aa		4.66	□□□□□ -1.66
LINC01146-208	ENST00000557355	NPC1L1	Q9UHC9	1359 aa		4.65	□□□□□ -1.66
LINC01146-208	ENST00000557355	hCG_1984214	I3L0E3	225 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	MT-CO3	P00414	261 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	FGA	P02671	866 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	AHSG	P02765	367 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	CTSA	P10619	480 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	PHKG2	P15735	406 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	RPS13	P62277	151 aa	Known RBP	4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	TMF1	P82094	1093 aa		4.65	□□□□□ -1.67
LINC01146-208	ENST00000557355	SATB1	Q01826	763 aa		4.65	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms