RNA–Protein interactions for RNA: ENST00000557355.1

LINC01146-208, Transcript of long intergenic non-protein coding RNA 1146, humanhuman

TSL 4 BASIC

Gene LINC01146, Length 548 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01146-208ENST00000557355 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
LINC01146-208ENST00000557355 CHIC1Q5VXU3 224 aa29.61■■■□□ 2.33
LINC01146-208ENST00000557355 SENP3Q9H4L4 574 aaPredicted RBP26.78■■□□□ 1.88
LINC01146-208ENST00000557355 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
LINC01146-208ENST00000557355 FOXD1Q16676 465 aa24.95■■□□□ 1.58
LINC01146-208ENST00000557355 PLPPR3Q6T4P5 718 aa23.61■■□□□ 1.37
LINC01146-208ENST00000557355 MSH5O43196 834 aa23.45■■□□□ 1.34
LINC01146-208ENST00000557355 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
LINC01146-208ENST00000557355 PPP6R1Q9UPN7 881 aa23.2■■□□□ 1.3
LINC01146-208ENST00000557355 ADRA2BP18089 450 aa23.13■■□□□ 1.29
LINC01146-208ENST00000557355 POTEDQ86YR6 584 aa23.12■■□□□ 1.29
LINC01146-208ENST00000557355 MAPK8IP2Q13387 824 aaPredicted RBP21.28■■□□□ 1
LINC01146-208ENST00000557355 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
LINC01146-208ENST00000557355 DMRT2Q9Y5R5 561 aa21.21■□□□□ 0.99
LINC01146-208ENST00000557355 PPP4R3CPQ6ZMV5 832 aa20.66■□□□□ 0.9
LINC01146-208ENST00000557355 DCAF8L1A6NGE4 600 aa20.36■□□□□ 0.85
LINC01146-208ENST00000557355 HOXD11P31277 338 aaPredicted RBP20.36■□□□□ 0.85
LINC01146-208ENST00000557355 CNKSR2Q8WXI2 1034 aa20.32■□□□□ 0.84
LINC01146-208ENST00000557355 CACNB1Q02641 598 aaPredicted RBP20.22■□□□□ 0.83
LINC01146-208ENST00000557355 RNF216Q9NWF9 866 aaPredicted RBP20.18■□□□□ 0.82
LINC01146-208ENST00000557355 RNF39Q9H2S5 420 aa19.97■□□□□ 0.79
LINC01146-208ENST00000557355 NCBP3Q53F19 620 aaKnown RBP19.86■□□□□ 0.77
LINC01146-208ENST00000557355 DNAJC5BQ9UF47 199 aa19.71■□□□□ 0.75
LINC01146-208ENST00000557355 C1QBPQ07021 282 aaKnown RBP19.7■□□□□ 0.74
LINC01146-208ENST00000557355 NPM3O75607 178 aaKnown RBP19.52■□□□□ 0.72
LINC01146-208ENST00000557355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.42■□□□□ 0.7
LINC01146-208ENST00000557355 KCNA4P22459 653 aa19■□□□□ 0.63
LINC01146-208ENST00000557355 U3KPZ7 1027 aaPredicted RBP18.97■□□□□ 0.63
LINC01146-208ENST00000557355 CAPN15O75808 1086 aa18.74■□□□□ 0.59
LINC01146-208ENST00000557355 SPINK5Q9NQ38 1064 aaPredicted RBP18.73■□□□□ 0.59
LINC01146-208ENST00000557355 SLC4A2P04920 1241 aa18.68■□□□□ 0.58
LINC01146-208ENST00000557355 DSG3P32926 999 aa18.65■□□□□ 0.58
LINC01146-208ENST00000557355 APLP2Q06481 763 aa18.48■□□□□ 0.55
LINC01146-208ENST00000557355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
LINC01146-208ENST00000557355 HNRNPUL2Q1KMD3 747 aaKnown RBP18.43■□□□□ 0.54
LINC01146-208ENST00000557355 TRHP20396 242 aaPredicted RBP18.4■□□□□ 0.54
LINC01146-208ENST00000557355 ZNF219Q9P2Y4 722 aaPredicted RBP18.37■□□□□ 0.53
LINC01146-208ENST00000557355 SAMD1Q6SPF0 538 aaPredicted RBP18.3■□□□□ 0.52
LINC01146-208ENST00000557355 ABCB7O75027 752 aa18.27■□□□□ 0.52
LINC01146-208ENST00000557355 POTEHQ6S545 545 aa18.1■□□□□ 0.49
LINC01146-208ENST00000557355 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
LINC01146-208ENST00000557355 SLC4A1APQ9BWU0 796 aaKnown RBP17.93■□□□□ 0.46
LINC01146-208ENST00000557355 POLA2Q14181 598 aa17.87■□□□□ 0.45
LINC01146-208ENST00000557355 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.44
LINC01146-208ENST00000557355 FOXD4L1Q9NU39 408 aa17.8■□□□□ 0.44
LINC01146-208ENST00000557355 ATF5Q9Y2D1 282 aaPredicted RBP17.64■□□□□ 0.41
LINC01146-208ENST00000557355 ZBTB12Q9Y330 459 aaPredicted RBP17.52■□□□□ 0.4
LINC01146-208ENST00000557355 CHRDL2Q6WN34 429 aa17.48■□□□□ 0.39
LINC01146-208ENST00000557355 ZBTB22O15209 634 aa17.44■□□□□ 0.38
LINC01146-208ENST00000557355 AKT1S1Q96B36 256 aa17.38■□□□□ 0.37
LINC01146-208ENST00000557355 OSCARQ8IYS5 282 aa17.29■□□□□ 0.36
LINC01146-208ENST00000557355 ATXN8OSP0DMR3 200 aa17.28■□□□□ 0.36
LINC01146-208ENST00000557355 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
LINC01146-208ENST00000557355 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
LINC01146-208ENST00000557355 FBLN2P98095 1184 aa17.02■□□□□ 0.32
LINC01146-208ENST00000557355 PITPNM1O00562 1244 aa17.01■□□□□ 0.31
LINC01146-208ENST00000557355 SPDYE2BA6NHP3 402 aa16.95■□□□□ 0.3
LINC01146-208ENST00000557355 SPDYE6P0CI01 402 aa16.95■□□□□ 0.3
LINC01146-208ENST00000557355 SPDYE2Q495Y8 402 aa16.95■□□□□ 0.3
LINC01146-208ENST00000557355 FXR2P51116 673 aaKnown RBP eCLIP16.9■□□□□ 0.3
LINC01146-208ENST00000557355 SP7Q8TDD2 431 aaPredicted RBP16.9■□□□□ 0.3
LINC01146-208ENST00000557355 MKRN4PQ13434 485 aaPredicted RBP16.82■□□□□ 0.28
LINC01146-208ENST00000557355 HAX1O00165 279 aa16.79■□□□□ 0.28
LINC01146-208ENST00000557355 ZNF692Q9BU19 519 aaPredicted RBP16.73■□□□□ 0.27
LINC01146-208ENST00000557355 SPDYE1Q8NFV5 336 aaPredicted RBP16.7■□□□□ 0.26
LINC01146-208ENST00000557355 SSUH2Q9Y2M2 353 aa16.69■□□□□ 0.26
LINC01146-208ENST00000557355 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
LINC01146-208ENST00000557355 PRKAR2AP13861 404 aaKnown RBP16.58■□□□□ 0.24
LINC01146-208ENST00000557355 EVX2Q03828 476 aa16.52■□□□□ 0.24
LINC01146-208ENST00000557355 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
LINC01146-208ENST00000557355 PABPN1Q86U42 306 aaKnown RBP eCLIP16.46■□□□□ 0.23
LINC01146-208ENST00000557355 PRR29P0C7W0 189 aa16.39■□□□□ 0.21
LINC01146-208ENST00000557355 C19orf67A6NJJ6 358 aa16.37■□□□□ 0.21
LINC01146-208ENST00000557355 CHADLQ6NUI6 762 aa16.34■□□□□ 0.21
LINC01146-208ENST00000557355 EHMT2Q96KQ7 1210 aa16.22■□□□□ 0.19
LINC01146-208ENST00000557355 GABBR2O75899 941 aa16.17■□□□□ 0.18
LINC01146-208ENST00000557355 FARP1Q9Y4F1 1045 aaPredicted RBP16.11■□□□□ 0.17
LINC01146-208ENST00000557355 CD44P16070 742 aaKnown RBP16.05■□□□□ 0.16
LINC01146-208ENST00000557355 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
LINC01146-208ENST00000557355 SPDYE4A6NLX3 237 aa15.99■□□□□ 0.15
LINC01146-208ENST00000557355 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
LINC01146-208ENST00000557355 CLCN6P51797 869 aa15.9■□□□□ 0.14
LINC01146-208ENST00000557355 LHX8Q68G74 356 aa15.86■□□□□ 0.13
LINC01146-208ENST00000557355 ZRANB1Q9UGI0 708 aa15.81■□□□□ 0.12
LINC01146-208ENST00000557355 POTEIP0CG38 1075 aa15.8■□□□□ 0.12
LINC01146-208ENST00000557355 ZNF579Q8NAF0 562 aaKnown RBP15.79■□□□□ 0.12
LINC01146-208ENST00000557355 DCBLD2Q96PD2 775 aa15.73■□□□□ 0.11
LINC01146-208ENST00000557355 PAK3O75914 559 aaPredicted RBP15.67■□□□□ 0.1
LINC01146-208ENST00000557355 NPM1P06748 294 aaKnown RBP eCLIP15.65■□□□□ 0.1
LINC01146-208ENST00000557355 GALR2O43603 387 aaPredicted RBP15.6■□□□□ 0.09
LINC01146-208ENST00000557355 MNX1P50219 401 aaPredicted RBP15.6■□□□□ 0.09
LINC01146-208ENST00000557355 PHF12Q96QT6 1004 aa15.56■□□□□ 0.08
LINC01146-208ENST00000557355 PROM2Q8N271 834 aa15.54■□□□□ 0.08
LINC01146-208ENST00000557355 TSPYL2Q9H2G4 693 aaPredicted RBP15.35■□□□□ 0.05
LINC01146-208ENST00000557355 MS4A3Q96HJ5 214 aa15.34■□□□□ 0.05
LINC01146-208ENST00000557355 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
LINC01146-208ENST00000557355 PELP1Q8IZL8 1130 aaKnown RBP15.3■□□□□ 0.04
LINC01146-208ENST00000557355 POTEB2H3BUK9 544 aa15.28■□□□□ 0.04
LINC01146-208ENST00000557355 MIER1Q8N108 512 aa15.28■□□□□ 0.04
LINC01146-208ENST00000557355 ASTLQ6HA08 431 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms