RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 CCDC130P13994 396 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CYP11B1P15538 503 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
VPS13B-210ENST00000521932 SOX5P35711 763 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ZNF75DP51815 510 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ITIH3Q06033 890 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CCDC85BQ15834 202 aaPredicted RBP8.83□□□□□ -1
VPS13B-210ENST00000521932 MEA1Q16626 185 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 MGAT5BQ3V5L5 792 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 LIN9Q5TKA1 542 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 SYCE2Q6PIF2 218 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 LCLAT1Q6UWP7 414 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CACNA2D4Q7Z3S7 1137 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 IRF2BP2Q7Z5L9 587 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 FAM35AQ86V20 835 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 FMNL3Q8IVF7 1028 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 MICALL1Q8N3F8 863 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 TTC9BQ8N6N2 239 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ANKRD52Q8NB46 1076 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 MAFAQ8NHW3 353 aaPredicted RBP8.83□□□□□ -1
VPS13B-210ENST00000521932 SLC7A14Q8TBB6 771 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 SLC2A14Q8TDB8 520 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 DDX1Q92499 740 aaKnown RBP8.83□□□□□ -1
VPS13B-210ENST00000521932 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
VPS13B-210ENST00000521932 SPATA17Q96L03 361 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 C8orf48Q96LL4 319 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 SPAG5Q96R06 1193 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 UBXN6Q9BZV1 441 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ZNF518BQ9C0D4 1074 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ADAM7Q9H2U9 754 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 SFXN1Q9H9B4 322 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 PNPLA8Q9NP80 782 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 FAM49BQ9NUQ9 324 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 TMEM30AQ9NV96 361 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 CLDND1Q9NY35 253 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 COG5Q9UP83 839 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 ASB3Q9Y575 518 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 INSL5Q9Y5Q6 135 aa8.83□□□□□ -1
VPS13B-210ENST00000521932 MTCL1Q9Y4B5 1905 aaKnown RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ELOA3CA0A087WX78 387 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ELOA3DA6NLF2 546 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 CLDN5O00501 218 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 GNB5O14775 395 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 MED7O43513 233 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SIN3BO75182 1162 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 TBX10O75333 385 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 BEST1O76090 585 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 LRG1P02750 347 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 GYPCP04921 128 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 CCDC172P0C7W6 258 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 FAM200BP0CF97 657 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 PNMA6AP0CW24 399 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ATF6P18850 670 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 GNA15P30679 374 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 GRIK1P39086 918 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 USP8P40818 1118 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ALDH1A3P47895 512 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 CDR1P51861 262 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 CACNA2D1P54289 1103 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 EPHB3P54753 998 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 RPL10AP62906 217 aaKnown RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ZBED6P86452 979 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 TWF1Q12792 350 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 TBX2Q13207 712 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 PLD1Q13393 1074 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 TRIM14Q14142 442 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ELOA3BQ3SY89 546 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 PPM1LQ5SGD2 360 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 CLEC20AQ6ZU45 233 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 GPR149Q86SP6 731 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SLC47A2Q86VL8 602 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ZNF677Q86XU0 584 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SMRP1Q8NCR6 262 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ZMIZ2Q8NF64 920 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ZNF397Q8NF99 534 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ELOA3Q8NG57 546 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SLC35F5Q8WV83 523 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 PSMG2Q969U7 264 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ZNF707Q96C28 371 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 TRIM11Q96F44 468 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SMARCD1Q96GM5 515 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 MYRFLQ96LU7 910 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 KCNK16Q96T55 309 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SEPT5Q99719 369 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 SMOQ99835 787 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 SPOCK3Q9BQ16 436 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 DUSP16Q9BY84 665 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 LHX5Q9H2C1 402 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 DMAP1Q9NPF5 467 aaPredicted RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 ACP6Q9NPH0 428 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 IL37Q9NZH6 218 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 TSPAN16Q9UKR8 245 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.82□□□□□ -1
VPS13B-210ENST00000521932 LUC7L2Q9Y383 392 aaKnown RBP8.82□□□□□ -1
VPS13B-210ENST00000521932 STARD13Q9Y3M8 1113 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 YIPF1Q9Y548 306 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 PLXNA3P51805 1871 aa8.82□□□□□ -1
VPS13B-210ENST00000521932 ATP8B3O60423 1300 aa8.81□□□□□ -1
VPS13B-210ENST00000521932 GOLGA6L3A6NEY3 463 aa8.81□□□□□ -1
VPS13B-210ENST00000521932 LRRC53A6NM62 1247 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 110.9 ms