RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 BRPF3Q9ULD4 1205 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 UBQLN1Q9UMX0 589 aaKnown RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 CPQQ9Y646 472 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 STON1Q9Y6Q2 735 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 PLXNA2O75051 1894 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 COL27A1Q8IZC6 1860 aaPredicted RBP10.04□□□□□ -0.8
CLCN3-208ENST00000512813 CKAP5Q14008 2032 aa10.04□□□□□ -0.8
CLCN3-208ENST00000512813 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 HAX1O00165 279 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 CYP26A1O43174 497 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 PRPF3O43395 683 aaKnown RBP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 ACSL1P33121 698 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 RCAN1P53805 252 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 BCAT1P54687 386 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 NOLC1Q14978 699 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 NFE2Q16621 373 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 SKA1Q96BD8 255 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 GRAMD1AQ96CP6 724 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 TMLHEQ9NVH6 421 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 DNAJC17Q9NVM6 304 aaKnown RBP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 CUEDC1Q9NWM3 386 aaPredicted RBP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 SMPD4Q9NXE4 827 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 TUBD1Q9UJT1 453 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 PCDHGA4Q9Y5G9 962 aa10.03□□□□□ -0.8
CLCN3-208ENST00000512813 ZFC3H1O60293 1989 aaKnown RBP10.03□□□□□ -0.8
CLCN3-208ENST00000512813 CSMD2Q7Z408 3487 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 CACNG3O60359 315 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 FSBPO95073 299 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 SEMA4FO95754 770 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 WNT1P04628 370 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 XRCC6P12956 609 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLCN3-208ENST00000512813 RXRGP48443 463 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 COPAP53621 1224 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 NLRP5P59047 1200 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 KCNAB2Q13303 367 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 ENPP2Q13822 863 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 ISXQ2M1V0 245 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 ANO4Q32M45 955 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 MPZL3Q6UWV2 235 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 METTL23Q86XA0 190 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 CACUL1Q86Y37 369 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 ARL14Q8N4G2 192 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 DUSP9Q99956 384 aaKnown RBP10.02□□□□□ -0.81
CLCN3-208ENST00000512813 LNPKQ9C0E8 428 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 RNF38Q9H0F5 515 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 SPHK2Q9NRA0 654 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 VPS54Q9P1Q0 977 aa10.02□□□□□ -0.81
CLCN3-208ENST00000512813 RBM8AQ9Y5S9 174 aaKnown RBP10.02□□□□□ -0.81
CLCN3-208ENST00000512813 A0A087X0B3 334 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 K7ERI5 159 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 M0R2N6 131 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 NPC1O15118 1278 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 XPOTO43592 962 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 SIGLEC6O43699 453 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 NOBOXO60393 691 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 CXCL8P10145 99 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 GCFC2P16383 781 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 ADD1P35611 737 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 GUCY2FP51841 1108 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 SPAG1Q07617 926 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 BNIP3Q12983 259 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 SRSF6Q13247 344 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 ZNF211Q13398 564 aaPredicted RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 TMEM25Q86YD3 366 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 OXR1Q8N573 874 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 SLC6A18Q96N87 628 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 TCHPQ9BT92 498 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 TARS2Q9BW92 718 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 MRPL4Q9BYD3 311 aaKnown RBP10.01□□□□□ -0.81
CLCN3-208ENST00000512813 PLEKHA5Q9HAU0 1116 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 SH3GLB2Q9NR46 395 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 TRPM5Q9NZQ8 1165 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 PCDHA4Q9UN74 947 aa10.01□□□□□ -0.81
CLCN3-208ENST00000512813 A0A087WWV3 80 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 CCDC196A0A1B0GTZ2 297 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 A0A1B0GVM2 712 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 TTC26A0AVF1 554 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 PMS2P1A4D2B8 440 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 DDAH2O95865 285 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 OAS1P00973 400 aaKnown RBP10□□□□□ -0.81
CLCN3-208ENST00000512813 IGHV4-34P06331 123 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 GP1BAP07359 652 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 ITGA2BP08514 1039 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 C7P10643 843 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 HARSP12081 509 aaKnown RBP10□□□□□ -0.81
CLCN3-208ENST00000512813 CYP2F1P24903 491 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 UQCRFS1P47985 274 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 DAB2P98082 770 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 TSPY1Q01534 308 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 CAPRIN2Q6IMN6 1127 aaKnown RBP10□□□□□ -0.81
CLCN3-208ENST00000512813 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 HTR3CQ8WXA8 447 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 ATXN7L3BQ96GX2 97 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 IFT74Q96LB3 600 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 ERVMER34-1Q9H9K5 563 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 WDR70Q9NW82 654 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 SVILO95425 2214 aa10□□□□□ -0.81
CLCN3-208ENST00000512813 HIVEP3Q5T1R4 2406 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms