RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 RPLP0P6Q8NHW5 317 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 ACDQ96AP0 544 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 POLR3BQ9NW08 1133 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 CLIC5Q9NZA1 410 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 NCDNQ9UBB6 729 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 SH3BP1Q9Y3L3 701 aa9.56□□□□□ -0.88
PDLIM5-209ENST00000506632 SPAG17Q6Q759 2223 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 A0A1W2PQH9 124 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 BICDL2A1A5D9 508 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 BIN1O00499 593 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 RARGP13631 454 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 TBXAS1P24557 533 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 SLC6A11P48066 632 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 UBE2HP62256 183 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 YWHAEP62258 255 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PAK1Q13153 545 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 SIM2Q14190 667 aaPredicted RBP9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 DMC1Q14565 340 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 CCDC40Q4G0X9 1142 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PKDCCQ504Y2 493 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 Q6ZNB5 142 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 BHLHA9Q7RTU4 235 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PIGZQ86VD9 579 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 SFTPA1Q8IWL2 248 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 GPR161Q8N6U8 529 aaKnown RBP9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 CCDC26Q8TAB7 109 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 GAB3Q8WWW8 586 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PNKPQ96T60 521 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 HINFPQ9BQA5 517 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PARD6AQ9NPB6 346 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 SPHK2Q9NRA0 654 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 CHMP5Q9NZZ3 219 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 KIAA1468Q9P260 1216 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 EBF1Q9UH73 591 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 TSPAN16Q9UKR8 245 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 SLC8A2Q9UPR5 921 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 CTNND2Q9UQB3 1225 aa9.55□□□□□ -0.88
PDLIM5-209ENST00000506632 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 TULP2O00295 520 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 O00370 1275 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 XPO1O14980 1071 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MDM4O15151 490 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 LRP3O75074 770 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 KAT7O95251 611 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 GNA14O95837 355 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 RETP07949 1114 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 PAEPP09466 180 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 IRF1P10914 325 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 VDRP11473 427 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 GRIA2P42262 883 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 KIR2DL1P43626 348 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 PLA2G4AP47712 749 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 ID4P47928 161 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 PXNP49023 591 aaPredicted RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 BCAT1P54687 386 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 STX17P56962 302 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MRPS21P82921 87 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 GAD2Q05329 585 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 PDE4CQ08493 712 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 BST2Q10589 180 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 LRMPQ12912 555 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 LPAL2Q16609 132 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 SGO2Q562F6 1265 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 PM20D1Q6GTS8 502 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 TMEM25Q86YD3 366 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 KAT5Q92993 513 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 SECISBP2LQ93073 1101 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 RMDN1Q96DB5 314 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 NT5C1BQ96P26 610 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 HHIPQ96QV1 700 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MED15Q96RN5 788 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 CDK5RAP1Q96SZ6 601 aaKnown RBP9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 ZSWIM1Q9BR11 485 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 NACA2Q9H009 215 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MARK1Q9P0L2 795 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 DNMT3LQ9UJW3 386 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 NAGPAQ9UK23 515 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 GMEB2Q9UKD1 530 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 NUDT5Q9UKK9 219 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 RAB23Q9ULC3 237 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 KIAA1257Q9ULG3 409 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MMP17Q9ULZ9 603 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 SDK1Q7Z5N4 2213 aa9.54□□□□□ -0.88
PDLIM5-209ENST00000506632 MYO18AQ92614 2054 aaKnown RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 RNF225M0QZC1 329 aaPredicted RBP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 AXIN1O15169 862 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 CACNG3O60359 315 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 TULP3O75386 442 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 STC2O76061 302 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 APBB3O95704 486 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ZBED1O96006 694 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 APODP05090 189 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 RALAP11233 206 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 HNRNPLP14866 589 aaKnown RBP eCLIP9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 TNFRSF4P43489 277 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 TKTL1P51854 596 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 ZNF132P52740 706 aa9.53□□□□□ -0.88
PDLIM5-209ENST00000506632 GCNT1Q02742 428 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms