RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PCDHGA9Q9Y5G4 932 aaKnown RBP8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA8Q9Y5G5 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA7Q9Y5G6 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA6Q9Y5G7 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA3Q9Y5H0 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 PCDHGA2Q9Y5H1 932 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 TRPV2Q9Y5S1 764 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 ARID2Q68CP9 1835 aa8.82□□□□□ -1
ECHDC1-212ENST00000461239 A0A087WZ62 844 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 GRXCR1A8MXD5 290 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 MGEA5O60502 916 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 USO1O60763 962 aaKnown RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 RNASE1P07998 156 aaKnown RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 PFKMP08237 780 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 TMEM253P0C7T8 217 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CYP11B2P19099 503 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 FGFR4P22455 802 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 GLRA2P23416 452 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CD52P31358 61 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CRYBB1P53674 252 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 POLGP54098 1239 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 SLC12A3P55017 1021 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 MAPK7Q13164 816 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 PLCL1Q15111 1095 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 STK38Q15208 465 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 ZRSR1Q15695 479 aaKnown RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 RINT1Q6NUQ1 792 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CNKSR3Q6P9H4 555 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 PGM2L1Q6PCE3 622 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 PSRC1Q6PGN9 363 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 SHC4Q6S5L8 630 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.81□□□□□ -1
ECHDC1-212ENST00000461239 C1orf186Q6ZWK4 172 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 TMCO2Q7Z6W1 182 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 RSPH3Q86UC2 560 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 FAM228AQ86W67 206 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 TRIM48Q8IWZ4 208 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 DAW1Q8N136 415 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CPA6Q8N4T0 437 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 TTC8Q8TAM2 541 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 ZNF396Q96N95 335 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 FDXACB1Q9BRP7 624 aaPredicted RBP8.81□□□□□ -1
ECHDC1-212ENST00000461239 MINDY3Q9H8M7 445 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 IFT122Q9HBG6 1241 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 ERVK-5Q9HDB9 667 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 PCDHA7Q9UN72 937 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 CTNND2Q9UQB3 1225 aa8.81□□□□□ -1
ECHDC1-212ENST00000461239 A0A1W2PPC1 479 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 PRAMEF25A6NGN4 478 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 SNUPNO95149 360 aaKnown RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 CYBBP04839 570 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 PLA2G4BP0C869 781 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 DARSP14868 501 aaKnown RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 TMOD1P28289 359 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 GNALP38405 381 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 ARL4AP40617 200 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 UBA7P41226 1012 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 RECQLP46063 649 aaPredicted RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 WDR5P61964 334 aaKnown RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 DEFB103AP81534 67 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 LAMTOR4Q0VGL1 99 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 CAPSQ13938 189 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 ODF1Q14990 250 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 LRIT3Q3SXY7 679 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 ATL3Q6DD88 541 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 TSHZ1Q6ZSZ6 1077 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 MAEAQ7L5Y9 396 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 MILR1Q7Z6M3 343 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 RHPN2Q8IUC4 686 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 SYT2Q8N9I0 419 aaPredicted RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 MYLIPQ8WY64 445 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 KRTAP4-12Q9BQ66 201 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 KRTAP9-9Q9BYP9 154 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 KRTAP9-4Q9BYQ2 154 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 IFIH1Q9BYX4 1025 aaKnown RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 ATP6V0A4Q9HBG4 840 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 CCM2LQ9NUG4 571 aaPredicted RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 MKS1Q9NXB0 559 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 USP36Q9P275 1121 aaKnown RBP8.8□□□□□ -1
ECHDC1-212ENST00000461239 MSRAQ9UJ68 235 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 PADI3Q9ULW8 664 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 ST3GAL5Q9UNP4 418 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 DNM3Q9UQ16 869 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 GINS2Q9Y248 185 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 SQORQ9Y6N5 450 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 PTPRSQ13332 1948 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 LOXHD1Q8IVV2 1947 aa8.8□□□□□ -1
ECHDC1-212ENST00000461239 EYSQ5T1H1 3165 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 ZC3H12DA2A288 527 aaKnown RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 ARHGEF35A5YM69 484 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 SLC26A4O43511 780 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 CUTAO60888 179 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 EDN1P05305 212 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 RPLP2P05387 115 aaKnown RBP8.79□□□□□ -1
ECHDC1-212ENST00000461239 CCND1P24385 295 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 FXR1P51114 621 aaKnown RBP eCLIP8.79□□□□□ -1
ECHDC1-212ENST00000461239 ERVFRD-1P60508 538 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 NUCB2P80303 420 aa8.79□□□□□ -1
ECHDC1-212ENST00000461239 MLC1Q15049 377 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms