RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Timm44O35857 452 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 GnazO70443 355 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Prl3b1P09586 222 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rhox5P52651 210 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 PolgP54099 1218 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ext2P70428 718 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Krt26Q3TRJ4 462 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmcc1Q69ZZ6 649 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Slc17a6Q8BLE7 582 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gtpbp10Q8K013 366 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 HnmtQ91VF2 295 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mtif2Q91YJ5 727 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Vta1Q9CR26 309 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ndufaf1Q9CWX2 328 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Actrt1Q9D9J3 376 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Atp13a1Q9EPE9 1200 aaKnown RBP10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 DpysQ9EQF5 519 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Vmn2r25W4VSP2 855 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 CitP49025 2055 aa10.07□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ccdc8D3YZV8 685 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fbxl18E9PYR1 771 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rad51ap2G3UW63 976 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dpysl4O35098 572 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 LeprP48356 1162 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Adamts10P58459 1104 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sash1P59808 1230 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Serpina1eQ00898 413 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cog7Q3UM29 770 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 A1cfQ5YD48 595 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Grid1Q61627 1009 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fbxo38Q8BMI0 1194 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Wdr60Q8C761 999 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pcdhb7Q8CDY9 829 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Haus3Q8QZX2 570 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Snrnp25Q8VIK1 123 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dnajc9Q91WN1 259 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Twf1Q91YR1 350 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Frmd4bQ920B0 1035 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rtfdc1Q99K95 307 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp64Q99KE8 643 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Lima1Q9ERG0 753 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Btaf1E9QAE3 1848 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Itga9B8JK39 1036 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Fam167bP17257 162 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Nr2c2P49117 596 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ccr1P51675 355 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Soat1Q61263 540 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Atg9bQ6EBV9 922 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp943Q6NZP4 507 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Plppr4Q7TME0 766 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cwf19l2Q8BG79 887 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tyw3Q8BSA9 257 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Nipal4Q8BZF2 406 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Syne4Q8CII8 388 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kctd15Q8K0E1 283 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Vmn1r213Q8R278 384 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Olfr784Q8VFZ9 319 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Dpp3Q99KK7 738 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Pcyox1Q9CQF9 505 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tomm20lQ9D4V6 152 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Sun1Q9D666 913 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Chit1Q9D7Q1 464 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 TfgQ9Z1A1 397 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Scn9aQ62205 1984 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Arhgef37A1IGU4 676 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 1700064H15RikD3Z4D4 81 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kifc5bE9PUA5 672 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 2010300C02RikE9Q3M9 1175 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm43302L7N1X8 611 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Itgb3O54890 787 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Il3P01586 166 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 EpoP07321 192 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 TxnP10639 105 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Rfx2P48379 717 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Frg1P97376 258 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Casp7P97864 303 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gbp10Q000W5 611 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Mrgprx2Q3UG50 352 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Als2clQ60I26 952 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 FcgrtQ61559 365 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Cyp2c29Q64458 490 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Catsper3Q80W99 395 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Tmem260Q8BMD6 703 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Map1sQ8C052 973 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Trub1Q8C0D0 338 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Zfp263Q8CF60 680 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Snrnp27Q8K194 155 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Kct2Q8K201 259 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 AenQ9CZI9 336 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Prss23Q9D6X6 382 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ube4bQ9ES00 1173 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Shcbp1Q9Z179 668 aa10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Ddx39bQ9Z1N5 428 aaKnown RBP10.06□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Plekhg4A0A1L1SU27 1217 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 D830030K20RikE9PYQ5 218 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Morc3F7BJB9 942 aaKnown RBP10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm3043K7N693 218 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm16440K7N6G6 218 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm2244L7N2A3 218 aa10.05□□□□□ -0.8
Pcdh1-201ENSMUST00000057185 Gm3278L7N2D2 218 aa10.05□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms