Protein–RNA interactions for Protein: Q99K95

Rtfdc1, Protein RTF2 homolog, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtfdc1Q99K95 Gm25239-201ENSMUST00000174915 86 ntBASIC42.34■■■■■ 4.37
Rtfdc1Q99K95 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC39.15■■■■□ 3.86
Rtfdc1Q99K95 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
Rtfdc1Q99K95 Gm15042-201ENSMUST00000120212 883 ntBASIC37.02■■■■□ 3.52
Rtfdc1Q99K95 Gm24109-201ENSMUST00000175489 103 ntBASIC36.68■■■■□ 3.46
Rtfdc1Q99K95 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.43
Rtfdc1Q99K95 Gm15045-201ENSMUST00000117359 883 ntBASIC36.22■■■■□ 3.39
Rtfdc1Q99K95 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC35.89■■■■□ 3.34
Rtfdc1Q99K95 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.84■■■■□ 3.33
Rtfdc1Q99K95 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC35.72■■■■□ 3.31
Rtfdc1Q99K95 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
Rtfdc1Q99K95 Gm23366-201ENSMUST00000175022 89 ntBASIC35.35■■■■□ 3.25
Rtfdc1Q99K95 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.31■■■■□ 3.24
Rtfdc1Q99K95 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
Rtfdc1Q99K95 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
Rtfdc1Q99K95 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Rtfdc1Q99K95 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.31■■■■□ 3.08
Rtfdc1Q99K95 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.22■■■■□ 3.07
Rtfdc1Q99K95 AC153911.1-202ENSMUST00000218534 1034 ntBASIC34.2■■■■□ 3.07
Rtfdc1Q99K95 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC34.15■■■■□ 3.06
Rtfdc1Q99K95 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.05
Rtfdc1Q99K95 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.99■■■■□ 3.03
Rtfdc1Q99K95 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.83■■■■□ 3.01
Rtfdc1Q99K95 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC33.8■■■■□ 3
Rtfdc1Q99K95 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.8■■■■□ 3
Rtfdc1Q99K95 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC33.78■■■■□ 3
Rtfdc1Q99K95 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Rtfdc1Q99K95 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.66■■■□□ 2.98
Rtfdc1Q99K95 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC33.65■■■□□ 2.98
Rtfdc1Q99K95 Psd-208ENSMUST00000224556 2034 ntBASIC33.58■■■□□ 2.97
Rtfdc1Q99K95 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC33.57■■■□□ 2.96
Rtfdc1Q99K95 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC33.54■■■□□ 2.96
Rtfdc1Q99K95 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC33.5■■■□□ 2.95
Rtfdc1Q99K95 Gm25238-201ENSMUST00000174914 89 ntBASIC33.42■■■□□ 2.94
Rtfdc1Q99K95 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC33.35■■■□□ 2.93
Rtfdc1Q99K95 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.34■■■□□ 2.93
Rtfdc1Q99K95 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.26■■■□□ 2.91
Rtfdc1Q99K95 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC32.96■■■□□ 2.87
Rtfdc1Q99K95 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
Rtfdc1Q99K95 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Rtfdc1Q99K95 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Rtfdc1Q99K95 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Rtfdc1Q99K95 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Rtfdc1Q99K95 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC32.61■■■□□ 2.81
Rtfdc1Q99K95 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Rtfdc1Q99K95 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Rtfdc1Q99K95 Gm27325-201ENSMUST00000175467 74 ntBASIC32.45■■■□□ 2.79
Rtfdc1Q99K95 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.33■■■□□ 2.77
Rtfdc1Q99K95 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC32.33■■■□□ 2.77
Rtfdc1Q99K95 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Rtfdc1Q99K95 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
Rtfdc1Q99K95 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rtfdc1Q99K95 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC32.19■■■□□ 2.74
Rtfdc1Q99K95 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.15■■■□□ 2.74
Rtfdc1Q99K95 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
Rtfdc1Q99K95 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32■■■□□ 2.71
Rtfdc1Q99K95 Gm25262-201ENSMUST00000174934 133 ntBASIC31.96■■■□□ 2.71
Rtfdc1Q99K95 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rtfdc1Q99K95 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rtfdc1Q99K95 Rab21-202ENSMUST00000218831 843 ntBASIC31.83■■■□□ 2.69
Rtfdc1Q99K95 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Rtfdc1Q99K95 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Rtfdc1Q99K95 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Rtfdc1Q99K95 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC31.74■■■□□ 2.67
Rtfdc1Q99K95 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC31.73■■■□□ 2.67
Rtfdc1Q99K95 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
Rtfdc1Q99K95 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Rtfdc1Q99K95 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Rtfdc1Q99K95 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC31.52■■■□□ 2.64
Rtfdc1Q99K95 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC31.51■■■□□ 2.64
Rtfdc1Q99K95 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rtfdc1Q99K95 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
Rtfdc1Q99K95 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rtfdc1Q99K95 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rtfdc1Q99K95 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.45■■■□□ 2.63
Rtfdc1Q99K95 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31.44■■■□□ 2.62
Rtfdc1Q99K95 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC31.42■■■□□ 2.62
Rtfdc1Q99K95 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rtfdc1Q99K95 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
Rtfdc1Q99K95 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rtfdc1Q99K95 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.38■■■□□ 2.61
Rtfdc1Q99K95 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
Rtfdc1Q99K95 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.35■■■□□ 2.61
Rtfdc1Q99K95 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.61
Rtfdc1Q99K95 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rtfdc1Q99K95 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rtfdc1Q99K95 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.17■■■□□ 2.58
Rtfdc1Q99K95 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.15■■■□□ 2.58
Rtfdc1Q99K95 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.14■■■□□ 2.58
Rtfdc1Q99K95 Gm26115-201ENSMUST00000175605 87 ntBASIC31.14■■■□□ 2.58
Rtfdc1Q99K95 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.57
Rtfdc1Q99K95 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtfdc1Q99K95 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtfdc1Q99K95 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rtfdc1Q99K95 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rtfdc1Q99K95 Gm8109-201ENSMUST00000194076 746 ntBASIC31.02■■■□□ 2.56
Rtfdc1Q99K95 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Rtfdc1Q99K95 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Rtfdc1Q99K95 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.97■■■□□ 2.55
Rtfdc1Q99K95 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms