Protein–RNA interactions for Protein: Q8R278

Vmn1r213, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r213Q8R278 Gm25239-201ENSMUST00000174915 86 ntBASIC40,86■■■■■ 4,13
Vmn1r213Q8R278 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37,86■■■■□ 3,65
Vmn1r213Q8R278 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37,35■■■■□ 3,57
Vmn1r213Q8R278 Gm15042-201ENSMUST00000120212 883 ntBASIC35,57■■■■□ 3,28
Vmn1r213Q8R278 Gm24109-201ENSMUST00000175489 103 ntBASIC35,49■■■■□ 3,27
Vmn1r213Q8R278 Gm15045-201ENSMUST00000117359 883 ntBASIC34,69■■■■□ 3,14
Vmn1r213Q8R278 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34,63■■■■□ 3,13
Vmn1r213Q8R278 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34,48■■■■□ 3,11
Vmn1r213Q8R278 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34,46■■■■□ 3,11
Vmn1r213Q8R278 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,25■■■■□ 3,07
Vmn1r213Q8R278 Gm23366-201ENSMUST00000175022 89 ntBASIC34,13■■■■□ 3,05
Vmn1r213Q8R278 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33,94■■■■□ 3,02
Vmn1r213Q8R278 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,76■■■□□ 2,99
Vmn1r213Q8R278 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Vmn1r213Q8R278 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33,16■■■□□ 2,9
Vmn1r213Q8R278 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,15■■■□□ 2,9
Vmn1r213Q8R278 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32,89■■■□□ 2,86
Vmn1r213Q8R278 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32,87■■■□□ 2,85
Vmn1r213Q8R278 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32,84■■■□□ 2,85
Vmn1r213Q8R278 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32,66■■■□□ 2,82
Vmn1r213Q8R278 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32,65■■■□□ 2,82
Vmn1r213Q8R278 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32,61■■■□□ 2,81
Vmn1r213Q8R278 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32,53■■■□□ 2,8
Vmn1r213Q8R278 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32,45■■■□□ 2,78
Vmn1r213Q8R278 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32,43■■■□□ 2,78
Vmn1r213Q8R278 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32,41■■■□□ 2,78
Vmn1r213Q8R278 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32,36■■■□□ 2,77
Vmn1r213Q8R278 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32,33■■■□□ 2,77
Vmn1r213Q8R278 Gm25238-201ENSMUST00000174914 89 ntBASIC32,27■■■□□ 2,76
Vmn1r213Q8R278 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32,22■■■□□ 2,75
Vmn1r213Q8R278 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32,18■■■□□ 2,74
Vmn1r213Q8R278 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32,1■■■□□ 2,73
Vmn1r213Q8R278 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31,84■■■□□ 2,69
Vmn1r213Q8R278 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,83■■■□□ 2,69
Vmn1r213Q8R278 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,71■■■□□ 2,67
Vmn1r213Q8R278 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31,63■■■□□ 2,65
Vmn1r213Q8R278 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31,53■■■□□ 2,64
Vmn1r213Q8R278 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31,51■■■□□ 2,63
Vmn1r213Q8R278 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31,43■■■□□ 2,62
Vmn1r213Q8R278 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31,41■■■□□ 2,62
Vmn1r213Q8R278 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,37■■■□□ 2,61
Vmn1r213Q8R278 Psd-208ENSMUST00000224556 2034 ntBASIC31,35■■■□□ 2,61
Vmn1r213Q8R278 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31,24■■■□□ 2,59
Vmn1r213Q8R278 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31,24■■■□□ 2,59
Vmn1r213Q8R278 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31,23■■■□□ 2,59
Vmn1r213Q8R278 Gm27325-201ENSMUST00000175467 74 ntBASIC31,11■■■□□ 2,57
Vmn1r213Q8R278 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31,09■■■□□ 2,57
Vmn1r213Q8R278 Gm25262-201ENSMUST00000174934 133 ntBASIC31,05■■■□□ 2,56
Vmn1r213Q8R278 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Vmn1r213Q8R278 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,94■■■□□ 2,54
Vmn1r213Q8R278 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Vmn1r213Q8R278 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Vmn1r213Q8R278 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30,74■■■□□ 2,51
Vmn1r213Q8R278 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Vmn1r213Q8R278 Rab21-202ENSMUST00000218831 843 ntBASIC30,67■■■□□ 2,5
Vmn1r213Q8R278 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30,66■■■□□ 2,5
Vmn1r213Q8R278 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,64■■■□□ 2,5
Vmn1r213Q8R278 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30,62■■■□□ 2,49
Vmn1r213Q8R278 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30,62■■■□□ 2,49
Vmn1r213Q8R278 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30,5■■■□□ 2,47
Vmn1r213Q8R278 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30,5■■■□□ 2,47
Vmn1r213Q8R278 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30,48■■■□□ 2,47
Vmn1r213Q8R278 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30,46■■■□□ 2,47
Vmn1r213Q8R278 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30,38■■■□□ 2,45
Vmn1r213Q8R278 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30,37■■■□□ 2,45
Vmn1r213Q8R278 Gm26115-201ENSMUST00000175605 87 ntBASIC30,34■■■□□ 2,45
Vmn1r213Q8R278 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Vmn1r213Q8R278 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30,28■■■□□ 2,44
Vmn1r213Q8R278 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,24■■■□□ 2,43
Vmn1r213Q8R278 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Vmn1r213Q8R278 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30,21■■■□□ 2,43
Vmn1r213Q8R278 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Vmn1r213Q8R278 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Vmn1r213Q8R278 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30,18■■■□□ 2,42
Vmn1r213Q8R278 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,15■■■□□ 2,42
Vmn1r213Q8R278 Gm8109-201ENSMUST00000194076 746 ntBASIC30,14■■■□□ 2,42
Vmn1r213Q8R278 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Vmn1r213Q8R278 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30,12■■■□□ 2,41
Vmn1r213Q8R278 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Vmn1r213Q8R278 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,1■■■□□ 2,41
Vmn1r213Q8R278 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30,04■■■□□ 2,4
Vmn1r213Q8R278 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,04■■■□□ 2,4
Vmn1r213Q8R278 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29,97■■■□□ 2,39
Vmn1r213Q8R278 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29,95■■■□□ 2,39
Vmn1r213Q8R278 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29,95■■■□□ 2,38
Vmn1r213Q8R278 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29,91■■■□□ 2,38
Vmn1r213Q8R278 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29,87■■■□□ 2,37
Vmn1r213Q8R278 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,81■■■□□ 2,36
Vmn1r213Q8R278 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29,78■■■□□ 2,36
Vmn1r213Q8R278 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29,77■■■□□ 2,36
Vmn1r213Q8R278 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29,75■■■□□ 2,35
Vmn1r213Q8R278 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29,73■■■□□ 2,35
Vmn1r213Q8R278 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29,7■■■□□ 2,35
Vmn1r213Q8R278 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,69■■■□□ 2,34
Vmn1r213Q8R278 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,68■■■□□ 2,34
Vmn1r213Q8R278 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Vmn1r213Q8R278 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,65■■■□□ 2,34
Vmn1r213Q8R278 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29,61■■■□□ 2,33
Vmn1r213Q8R278 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29,6■■■□□ 2,33
Vmn1r213Q8R278 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29,58■■■□□ 2,33
Retrieved 100 of 76,532 protein–RNA pairs in 12,5 ms