Protein–RNA interactions for Protein: Q8R278

Vmn1r213, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r213Q8R278 Gm25239-201ENSMUST00000174915 86 ntBASIC40.86■■■■■ 4.13
Vmn1r213Q8R278 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.86■■■■□ 3.65
Vmn1r213Q8R278 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
Vmn1r213Q8R278 Gm15042-201ENSMUST00000120212 883 ntBASIC35.57■■■■□ 3.28
Vmn1r213Q8R278 Gm24109-201ENSMUST00000175489 103 ntBASIC35.49■■■■□ 3.27
Vmn1r213Q8R278 Gm15045-201ENSMUST00000117359 883 ntBASIC34.69■■■■□ 3.14
Vmn1r213Q8R278 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Vmn1r213Q8R278 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.48■■■■□ 3.11
Vmn1r213Q8R278 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.46■■■■□ 3.11
Vmn1r213Q8R278 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Vmn1r213Q8R278 Gm23366-201ENSMUST00000175022 89 ntBASIC34.13■■■■□ 3.05
Vmn1r213Q8R278 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Vmn1r213Q8R278 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Vmn1r213Q8R278 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Vmn1r213Q8R278 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.16■■■□□ 2.9
Vmn1r213Q8R278 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
Vmn1r213Q8R278 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.89■■■□□ 2.86
Vmn1r213Q8R278 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.87■■■□□ 2.85
Vmn1r213Q8R278 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.84■■■□□ 2.85
Vmn1r213Q8R278 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
Vmn1r213Q8R278 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.65■■■□□ 2.82
Vmn1r213Q8R278 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Vmn1r213Q8R278 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.53■■■□□ 2.8
Vmn1r213Q8R278 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
Vmn1r213Q8R278 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Vmn1r213Q8R278 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Vmn1r213Q8R278 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Vmn1r213Q8R278 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.33■■■□□ 2.77
Vmn1r213Q8R278 Gm25238-201ENSMUST00000174914 89 ntBASIC32.27■■■□□ 2.76
Vmn1r213Q8R278 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Vmn1r213Q8R278 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
Vmn1r213Q8R278 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Vmn1r213Q8R278 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.84■■■□□ 2.69
Vmn1r213Q8R278 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Vmn1r213Q8R278 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
Vmn1r213Q8R278 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.63■■■□□ 2.65
Vmn1r213Q8R278 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Vmn1r213Q8R278 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Vmn1r213Q8R278 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Vmn1r213Q8R278 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.41■■■□□ 2.62
Vmn1r213Q8R278 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Vmn1r213Q8R278 Psd-208ENSMUST00000224556 2034 ntBASIC31.35■■■□□ 2.61
Vmn1r213Q8R278 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.24■■■□□ 2.59
Vmn1r213Q8R278 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
Vmn1r213Q8R278 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.23■■■□□ 2.59
Vmn1r213Q8R278 Gm27325-201ENSMUST00000175467 74 ntBASIC31.11■■■□□ 2.57
Vmn1r213Q8R278 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.09■■■□□ 2.57
Vmn1r213Q8R278 Gm25262-201ENSMUST00000174934 133 ntBASIC31.05■■■□□ 2.56
Vmn1r213Q8R278 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Vmn1r213Q8R278 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
Vmn1r213Q8R278 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Vmn1r213Q8R278 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Vmn1r213Q8R278 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Vmn1r213Q8R278 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Vmn1r213Q8R278 Rab21-202ENSMUST00000218831 843 ntBASIC30.67■■■□□ 2.5
Vmn1r213Q8R278 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.66■■■□□ 2.5
Vmn1r213Q8R278 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Vmn1r213Q8R278 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.62■■■□□ 2.49
Vmn1r213Q8R278 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.62■■■□□ 2.49
Vmn1r213Q8R278 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.5■■■□□ 2.47
Vmn1r213Q8R278 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.5■■■□□ 2.47
Vmn1r213Q8R278 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Vmn1r213Q8R278 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.46■■■□□ 2.47
Vmn1r213Q8R278 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
Vmn1r213Q8R278 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
Vmn1r213Q8R278 Gm26115-201ENSMUST00000175605 87 ntBASIC30.34■■■□□ 2.45
Vmn1r213Q8R278 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Vmn1r213Q8R278 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Vmn1r213Q8R278 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
Vmn1r213Q8R278 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Vmn1r213Q8R278 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.21■■■□□ 2.43
Vmn1r213Q8R278 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Vmn1r213Q8R278 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Vmn1r213Q8R278 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.18■■■□□ 2.42
Vmn1r213Q8R278 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.15■■■□□ 2.42
Vmn1r213Q8R278 Gm8109-201ENSMUST00000194076 746 ntBASIC30.14■■■□□ 2.42
Vmn1r213Q8R278 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
Vmn1r213Q8R278 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.12■■■□□ 2.41
Vmn1r213Q8R278 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Vmn1r213Q8R278 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
Vmn1r213Q8R278 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Vmn1r213Q8R278 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Vmn1r213Q8R278 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Vmn1r213Q8R278 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.95■■■□□ 2.39
Vmn1r213Q8R278 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.38
Vmn1r213Q8R278 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.91■■■□□ 2.38
Vmn1r213Q8R278 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Vmn1r213Q8R278 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Vmn1r213Q8R278 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Vmn1r213Q8R278 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Vmn1r213Q8R278 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.75■■■□□ 2.35
Vmn1r213Q8R278 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.73■■■□□ 2.35
Vmn1r213Q8R278 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.7■■■□□ 2.35
Vmn1r213Q8R278 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Vmn1r213Q8R278 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
Vmn1r213Q8R278 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Vmn1r213Q8R278 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.65■■■□□ 2.34
Vmn1r213Q8R278 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.61■■■□□ 2.33
Vmn1r213Q8R278 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.6■■■□□ 2.33
Vmn1r213Q8R278 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms