Protein–RNA interactions for Protein: Q5YD48

A1cf, APOBEC1 complementation factor, mousemouse

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1cfQ5YD48 Gm25239-201ENSMUST00000174915 86 ntBASIC43.49■■■■■ 4.55
A1cfQ5YD48 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.24■■■■■ 4.03
A1cfQ5YD48 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC39.64■■■■□ 3.94
A1cfQ5YD48 Gm15042-201ENSMUST00000120212 883 ntBASIC37.95■■■■□ 3.67
A1cfQ5YD48 Gm24109-201ENSMUST00000175489 103 ntBASIC37.73■■■■□ 3.63
A1cfQ5YD48 Gm15045-201ENSMUST00000117359 883 ntBASIC37.12■■■■□ 3.53
A1cfQ5YD48 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
A1cfQ5YD48 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
A1cfQ5YD48 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.72■■■■□ 3.47
A1cfQ5YD48 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.46■■■■□ 3.43
A1cfQ5YD48 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
A1cfQ5YD48 Gm23366-201ENSMUST00000175022 89 ntBASIC36.29■■■■□ 3.4
A1cfQ5YD48 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.12■■■■□ 3.37
A1cfQ5YD48 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.81■■■■□ 3.32
A1cfQ5YD48 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
A1cfQ5YD48 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.18■■■■□ 3.22
A1cfQ5YD48 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.1■■■■□ 3.21
A1cfQ5YD48 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
A1cfQ5YD48 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC34.96■■■■□ 3.19
A1cfQ5YD48 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC34.96■■■■□ 3.19
A1cfQ5YD48 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC34.96■■■■□ 3.19
A1cfQ5YD48 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC34.79■■■■□ 3.16
A1cfQ5YD48 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
A1cfQ5YD48 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
A1cfQ5YD48 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
A1cfQ5YD48 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
A1cfQ5YD48 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
A1cfQ5YD48 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
A1cfQ5YD48 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
A1cfQ5YD48 Gm25238-201ENSMUST00000174914 89 ntBASIC34.35■■■■□ 3.09
A1cfQ5YD48 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
A1cfQ5YD48 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.3■■■■□ 3.08
A1cfQ5YD48 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
A1cfQ5YD48 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.27■■■■□ 3.08
A1cfQ5YD48 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.19■■■■□ 3.06
A1cfQ5YD48 Psd-208ENSMUST00000224556 2034 ntBASIC33.99■■■■□ 3.03
A1cfQ5YD48 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC33.93■■■■□ 3.02
A1cfQ5YD48 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC33.66■■■□□ 2.98
A1cfQ5YD48 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.59■■■□□ 2.97
A1cfQ5YD48 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
A1cfQ5YD48 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.47■■■□□ 2.95
A1cfQ5YD48 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
A1cfQ5YD48 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
A1cfQ5YD48 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.26■■■□□ 2.92
A1cfQ5YD48 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.25■■■□□ 2.91
A1cfQ5YD48 Gm27325-201ENSMUST00000175467 74 ntBASIC33.25■■■□□ 2.91
A1cfQ5YD48 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.24■■■□□ 2.91
A1cfQ5YD48 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
A1cfQ5YD48 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
A1cfQ5YD48 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
A1cfQ5YD48 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.05■■■□□ 2.88
A1cfQ5YD48 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC32.96■■■□□ 2.87
A1cfQ5YD48 Gm25262-201ENSMUST00000174934 133 ntBASIC32.89■■■□□ 2.86
A1cfQ5YD48 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.78■■■□□ 2.84
A1cfQ5YD48 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.76■■■□□ 2.83
A1cfQ5YD48 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
A1cfQ5YD48 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
A1cfQ5YD48 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.72■■■□□ 2.83
A1cfQ5YD48 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
A1cfQ5YD48 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
A1cfQ5YD48 Rab21-202ENSMUST00000218831 843 ntBASIC32.68■■■□□ 2.82
A1cfQ5YD48 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.58■■■□□ 2.81
A1cfQ5YD48 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
A1cfQ5YD48 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
A1cfQ5YD48 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
A1cfQ5YD48 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.4■■■□□ 2.78
A1cfQ5YD48 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.38■■■□□ 2.77
A1cfQ5YD48 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.37■■■□□ 2.77
A1cfQ5YD48 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
A1cfQ5YD48 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.3■■■□□ 2.76
A1cfQ5YD48 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.27■■■□□ 2.76
A1cfQ5YD48 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.27■■■□□ 2.76
A1cfQ5YD48 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.26■■■□□ 2.76
A1cfQ5YD48 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
A1cfQ5YD48 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
A1cfQ5YD48 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
A1cfQ5YD48 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
A1cfQ5YD48 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
A1cfQ5YD48 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.14■■■□□ 2.74
A1cfQ5YD48 Gm26115-201ENSMUST00000175605 87 ntBASIC32.09■■■□□ 2.73
A1cfQ5YD48 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
A1cfQ5YD48 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
A1cfQ5YD48 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
A1cfQ5YD48 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
A1cfQ5YD48 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
A1cfQ5YD48 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC31.98■■■□□ 2.71
A1cfQ5YD48 Gm8109-201ENSMUST00000194076 746 ntBASIC31.94■■■□□ 2.7
A1cfQ5YD48 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
A1cfQ5YD48 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.93■■■□□ 2.7
A1cfQ5YD48 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
A1cfQ5YD48 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
A1cfQ5YD48 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31.88■■■□□ 2.69
A1cfQ5YD48 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.84■■■□□ 2.69
A1cfQ5YD48 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
A1cfQ5YD48 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
A1cfQ5YD48 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
A1cfQ5YD48 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
A1cfQ5YD48 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.7■■■□□ 2.67
A1cfQ5YD48 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.69■■■□□ 2.66
A1cfQ5YD48 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.66■■■□□ 2.66
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms