RNA–Protein interactions for RNA: ENSMUST00000052648.8

Ccdc28a-201, Transcript of Coiled-coil domain-containing 28A, mousemouse

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Gene Ccdc28a, Length 2,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-201ENSMUST00000052648 Vmn2r72D3Z4N8 856 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gm8113E0CXS8 587 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PtproE9Q612 1226 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gm10722F6VLK5 217 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ptpn9O35239 593 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Lrrc4bP0C192 709 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc1a2P43006 572 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc1a1P51906 523 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 YwhagP61982 247 aaKnown RBP9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Hdgfl1Q2VPR5 283 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 EsrrbQ61539 433 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ssxb10Q6XAR7 170 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slitrk1Q810C1 696 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tmx4Q8C0L0 335 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Taf12Q8VE65 161 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pcdhb1Q91Y08 818 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Dph5Q9CWQ0 281 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Rin2Q9D684 903 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ttc33Q9D6K7 262 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 LactbQ9EP89 551 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Trp53inp1Q9QXE4 239 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 C87414E9PWI7 475 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Prdm15E9Q8T2 1174 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gfra2O08842 464 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Hoxb8P09632 243 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gnat1P20612 350 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Klra1P20937 262 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ca8P28651 291 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Nap1l1P28656 391 aaKnown RBP9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Upp1P52624 311 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 AdkP55264 361 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Dpf3P58269 378 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ap5z1Q3U829 807 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc5a10Q5SWY8 596 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cct6bQ61390 531 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sema3cQ62181 751 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Mef2dQ63943 514 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Vtcn1Q7TSP5 283 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Fnbp1Q80TY0 616 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Shc2Q8BMC3 573 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Prl7b1Q8CGZ9 251 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Phc3Q8CHP6 981 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Kat14Q8CID0 779 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Kdm1bQ8CIG3 826 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Prpf39Q8K2Z2 665 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Wdr98Q8VC42 657 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PawrQ925B0 333 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sntg2Q925E0 539 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ephx1Q9D379 455 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ttyh1Q9D3A9 450 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Sgf29Q9DA08 293 aaKnown RBP9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Stau1Q9Z108 487 aaKnown RBP9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Col4a4Q9QZR9 1682 aa9.26□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PtprdQ64487 1912 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Bdp1Q571C7 2467 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Znf804aA2AKY4 1200 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tcp10bE9PYJ0 438 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gm3336J3QMQ6 198 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Olfr1022L7MTT3 315 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Fam172aQ3TNH5 417 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Wdr41Q3UDP0 460 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Afg1lQ3V384 480 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gzf1Q4VBD9 706 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PkdccQ5RJI4 492 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Myo6Q64331 1265 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pwwp2aQ69Z61 730 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Zfp512bQ6PHP4 879 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 SugctQ7TNE1 436 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ddrgk1Q80WW9 315 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Znf598Q80YR4 908 aaKnown RBP9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ces2aQ8QZR3 558 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Pcdhb17Q91VD8 799 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Unc45aQ99KD5 944 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PigxQ99LV7 254 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Elf2Q9JHC9 593 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Ppp2r3cQ9JK24 453 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 ThegQ9JMB1 375 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 PignQ9R1S3 931 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 TfebQ9R210 475 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Bmp15Q9Z0L4 392 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Rasgrp1Q9Z1S3 795 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Kat6aQ8BZ21 2003 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tmem215A7E1Z1 235 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tcp10cE9Q046 482 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Snx12O70493 165 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Atxn1lP0C7T6 687 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Rps6ka1P18653 724 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tcp11Q01755 566 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Cntn3Q07409 1028 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Nr2c1Q505F1 590 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Tcf4Q60722 670 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Impg2Q80XH2 1243 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Q80Y73 168 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Gpt2Q8BGT5 522 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 DcakdQ8BHC4 231 aaKnown RBP9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 DrgxQ8BYH0 263 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Il36gQ8R460 164 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Caskin2Q8VHK1 1201 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Lysmd3Q99LE3 305 aa9.25□□□□□ -0.93
Ccdc28a-201ENSMUST00000052648 Slc39a5Q9D856 535 aa9.25□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms