Protein–RNA interactions for Protein: Q8BMC3

Shc2, SHC-transforming protein 2, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc2Q8BMC3 Gm25239-201ENSMUST00000174915 86 ntBASIC40.37■■■■■ 4.05
Shc2Q8BMC3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.64■■■■□ 3.62
Shc2Q8BMC3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC36.99■■■■□ 3.51
Shc2Q8BMC3 Gm24109-201ENSMUST00000175489 103 ntBASIC35.33■■■■□ 3.25
Shc2Q8BMC3 Gm15042-201ENSMUST00000120212 883 ntBASIC35.1■■■■□ 3.21
Shc2Q8BMC3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Shc2Q8BMC3 Gm15045-201ENSMUST00000117359 883 ntBASIC34.33■■■■□ 3.09
Shc2Q8BMC3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.11■■■■□ 3.05
Shc2Q8BMC3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.07■■■■□ 3.04
Shc2Q8BMC3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Shc2Q8BMC3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Shc2Q8BMC3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Shc2Q8BMC3 Gm23366-201ENSMUST00000175022 89 ntBASIC33.6■■■□□ 2.97
Shc2Q8BMC3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
Shc2Q8BMC3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.17■■■□□ 2.9
Shc2Q8BMC3 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.87■■■□□ 2.85
Shc2Q8BMC3 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.83■■■□□ 2.85
Shc2Q8BMC3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC32.8■■■□□ 2.84
Shc2Q8BMC3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Shc2Q8BMC3 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
Shc2Q8BMC3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Shc2Q8BMC3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.45■■■□□ 2.78
Shc2Q8BMC3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC32.4■■■□□ 2.78
Shc2Q8BMC3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.39■■■□□ 2.78
Shc2Q8BMC3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Shc2Q8BMC3 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Shc2Q8BMC3 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.09■■■□□ 2.73
Shc2Q8BMC3 Gm25238-201ENSMUST00000174914 89 ntBASIC32.08■■■□□ 2.73
Shc2Q8BMC3 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Shc2Q8BMC3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Shc2Q8BMC3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.96■■■□□ 2.71
Shc2Q8BMC3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.95■■■□□ 2.71
Shc2Q8BMC3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Shc2Q8BMC3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.8■■■□□ 2.68
Shc2Q8BMC3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
Shc2Q8BMC3 Psd-208ENSMUST00000224556 2034 ntBASIC31.63■■■□□ 2.65
Shc2Q8BMC3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
Shc2Q8BMC3 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.36■■■□□ 2.61
Shc2Q8BMC3 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Shc2Q8BMC3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.21■■■□□ 2.59
Shc2Q8BMC3 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.17■■■□□ 2.58
Shc2Q8BMC3 Gm25262-201ENSMUST00000174934 133 ntBASIC31.01■■■□□ 2.55
Shc2Q8BMC3 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Shc2Q8BMC3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC30.92■■■□□ 2.54
Shc2Q8BMC3 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC30.9■■■□□ 2.54
Shc2Q8BMC3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Shc2Q8BMC3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Shc2Q8BMC3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Shc2Q8BMC3 Gm27325-201ENSMUST00000175467 74 ntBASIC30.76■■■□□ 2.51
Shc2Q8BMC3 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Shc2Q8BMC3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.66■■■□□ 2.5
Shc2Q8BMC3 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC30.59■■■□□ 2.49
Shc2Q8BMC3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.57■■■□□ 2.48
Shc2Q8BMC3 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.54■■■□□ 2.48
Shc2Q8BMC3 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC30.53■■■□□ 2.48
Shc2Q8BMC3 Gm26115-201ENSMUST00000175605 87 ntBASIC30.51■■■□□ 2.47
Shc2Q8BMC3 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Shc2Q8BMC3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Shc2Q8BMC3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Shc2Q8BMC3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.37■■■□□ 2.45
Shc2Q8BMC3 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Shc2Q8BMC3 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.31■■■□□ 2.44
Shc2Q8BMC3 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Shc2Q8BMC3 Gm8109-201ENSMUST00000194076 746 ntBASIC30.28■■■□□ 2.44
Shc2Q8BMC3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Shc2Q8BMC3 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Shc2Q8BMC3 Rab21-202ENSMUST00000218831 843 ntBASIC30.2■■■□□ 2.43
Shc2Q8BMC3 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Shc2Q8BMC3 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.1■■■□□ 2.41
Shc2Q8BMC3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
Shc2Q8BMC3 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Shc2Q8BMC3 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.05■■■□□ 2.4
Shc2Q8BMC3 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
Shc2Q8BMC3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Shc2Q8BMC3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Shc2Q8BMC3 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Shc2Q8BMC3 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.87■■■□□ 2.37
Shc2Q8BMC3 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.86■■■□□ 2.37
Shc2Q8BMC3 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.84■■■□□ 2.37
Shc2Q8BMC3 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.82■■■□□ 2.36
Shc2Q8BMC3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shc2Q8BMC3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shc2Q8BMC3 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Shc2Q8BMC3 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.77■■■□□ 2.36
Shc2Q8BMC3 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.74■■■□□ 2.35
Shc2Q8BMC3 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.69■■■□□ 2.34
Shc2Q8BMC3 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shc2Q8BMC3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Shc2Q8BMC3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC29.61■■■□□ 2.33
Shc2Q8BMC3 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.61■■■□□ 2.33
Shc2Q8BMC3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Shc2Q8BMC3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Shc2Q8BMC3 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Shc2Q8BMC3 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.52■■■□□ 2.32
Shc2Q8BMC3 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
Shc2Q8BMC3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.46■■■□□ 2.31
Shc2Q8BMC3 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Shc2Q8BMC3 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.41■■■□□ 2.3
Shc2Q8BMC3 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Shc2Q8BMC3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms