RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 PIWIL1Q96J94 861 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 NCAPGQ9BPX3 1015 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 TTPALQ9BTX7 342 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 CSNK1G1Q9HCP0 422 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 PNPLA8Q9NP80 782 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 SMARCAL1Q9NZC9 954 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 EHD2Q9NZN4 543 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 RWDD3Q9Y3V2 267 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 PCDHB12Q9Y5F1 795 aa14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 MRPL42Q9Y6G3 142 aaKnown RBP14.51□□□□□ -0.09
PDLIM5-203ENST00000359265 F8VP50 259 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 DYNC1I1O14576 645 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 HSF2BPO75031 334 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 DAB1O75553 588 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 GRAP2O75791 330 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 SDC4P31431 198 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 GJC1P36383 396 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 FLT3P36888 993 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 CETN2P41208 172 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 TKTL1P51854 596 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 C2orf54Q08AI8 447 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 SMARCB1Q12824 385 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 ZNF211Q13398 564 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 TMEM173Q86WV6 379 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 KATNAL2Q8IYT4 538 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 SPATA4Q8NEY3 305 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 CLEC4CQ8WTT0 213 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 BCL7CQ8WUZ0 217 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 RHOBTB2Q9BYZ6 727 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 ULBP1Q9BZM6 244 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 CNGB3Q9NQW8 809 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 DDX56Q9NY93 547 aaKnown RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 ABI2Q9NYB9 513 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 SPG21Q9NZD8 308 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 PCDHB5Q9Y5E4 795 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 V9GYY5 206 aaPredicted RBP14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 CFAP54Q96N23 3096 aa14.5□□□□□ -0.09
PDLIM5-203ENST00000359265 PLXNA4Q9HCM2 1894 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 GOLGA6L10A0A0M3HER8 536 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 HHLA1C9JL84 531 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 CCDC188H7C350 402 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 FGGP02679 453 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 GLI1P08151 1106 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 KRT7P08729 469 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 OR4Q2P0C623 313 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 CPB1P15086 417 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 POU3F3P20264 500 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 PTPN9P43378 593 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 CACNA2D1P54289 1103 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 ADCY1Q08828 1119 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 ELF2Q15723 593 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 LONRF2Q1L5Z9 754 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 ERCC6LQ2NKX8 1250 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 USP41Q3LFD5 358 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 ODF2Q5BJF6 829 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 RAB41Q5JT25 222 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 ZFYVE27Q5T4F4 411 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 DAB2IPQ5VWQ8 1189 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 VSTM1Q6UX27 236 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 POLNQ7Z5Q5 900 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 SLC39A11Q8N1S5 342 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 SCML4Q8N228 414 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 MMGT1Q8N4V1 131 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 EXD1Q8NHP7 514 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 CLP1Q92989 425 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 FAM149B1Q96BN6 582 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 RBM41Q96IZ5 413 aaKnown RBP14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 KCNK16Q96T55 309 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 HERC2P3Q9BVR0 1158 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 TMEM30AQ9NV96 361 aa14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 COL4A4P53420 1690 aaPredicted RBP14.49□□□□□ -0.09
PDLIM5-203ENST00000359265 TRANK1O15050 2925 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 EPOPA6NHQ4 379 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 TRIM66O15016 1216 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 LRCH4O75427 683 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 EFEMP2O95967 443 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 KRT1P04264 644 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 PYGMP11217 842 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 PCK1P35558 622 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 DAOAP59103 153 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 KRT17Q04695 432 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 SMC1AQ14683 1233 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 RTP2Q5QGT7 225 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 KIAA1841Q6NSI8 718 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 TRNP1Q6NT89 227 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 CCDC50Q8IVM0 306 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 NOA1Q8NC60 698 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 SPPL2BQ8TCT7 592 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 C2orf15Q8WU43 125 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 MAIP1Q8WWC4 291 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 PIK3R5Q8WYR1 880 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 IRGQQ8WZA9 623 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 B3GALT6Q96L58 329 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 NGRNQ9NPE2 291 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 RBM12Q9NTZ6 932 aaKnown RBP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 STAP1Q9ULZ2 295 aa14.48□□□□□ -0.09
PDLIM5-203ENST00000359265 ZNF318Q5VUA4 2279 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms