RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR42, Length 351 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR42	snR42	GLC3	P32775	704 aa		4.7	□□□□□ -1.66
snR42	snR42	DLD3	P39976	496 aa	Known RBP	4.7	□□□□□ -1.66
snR42	snR42	UBP15	P50101	1230 aa		4.7	□□□□□ -1.66
snR42	snR42	MAK10	Q02197	733 aa		4.7	□□□□□ -1.66
snR42	snR42	YMR265C	Q03508	461 aa	Known RBP	4.7	□□□□□ -1.66
snR42	snR42	YMR187C	Q03236	431 aa		4.69	□□□□□ -1.66
snR42	snR42	TDA6	Q06466	467 aa		4.69	□□□□□ -1.66
snR42	snR42	ATG20	Q07528	640 aa		4.69	□□□□□ -1.66
snR42	snR42	YDR461C-A	Q2V2P7	80 aa		4.69	□□□□□ -1.66
snR42	snR42	GUT2	P32191	649 aa		4.68	□□□□□ -1.66
snR42	snR42	CSN12	P47130	423 aa		4.68	□□□□□ -1.66
snR42	snR42	RAD59	Q12223	238 aa		4.68	□□□□□ -1.66
snR42	snR42	SRB8	P25648	1427 aa		4.68	□□□□□ -1.66
snR42	snR42	SBE2	P42223	864 aa	Known RBP	4.67	□□□□□ -1.66
snR42	snR42	MSN5	P52918	1224 aa		4.67	□□□□□ -1.66
snR42	snR42	KRE33	P53914	1056 aa	Known RBP	4.67	□□□□□ -1.66
snR42	snR42	DMA1	P38823	416 aa		4.66	□□□□□ -1.66
snR42	snR42	AIM7	Q12156	149 aa		4.66	□□□□□ -1.66
snR42	snR42	SLA1	P32790	1244 aa		4.65	□□□□□ -1.67
snR42	snR42	MCX1	P38323	520 aa	Predicted RBP	4.65	□□□□□ -1.67
snR42	snR42	USO1	P25386	1790 aa		4.64	□□□□□ -1.67
snR42	snR42	IPL1	P38991	367 aa		4.64	□□□□□ -1.67
snR42	snR42	MAK16	P10962	306 aa	Predicted RBP	4.63	□□□□□ -1.67
snR42	snR42	SSN3	P39073	555 aa		4.63	□□□□□ -1.67
snR42	snR42	STE20	Q03497	939 aa	Known RBP	4.63	□□□□□ -1.67
snR42	snR42	FRA1	Q07825	749 aa		4.63	□□□□□ -1.67
snR42	snR42	TYS1	P36421	394 aa	Known RBP	4.62	□□□□□ -1.67
snR42	snR42	YNR014W	P53719	212 aa		4.62	□□□□□ -1.67
snR42	snR42	NAF1	P53919	492 aa	Known RBP	4.62	□□□□□ -1.67
snR42	snR42	TY1A-DR3	Q12441	440 aa		4.62	□□□□□ -1.67
snR42	snR42	AHP1	P38013	176 aa	Known RBP	4.61	□□□□□ -1.67
snR42	snR42	WTM2	Q12206	467 aa		4.61	□□□□□ -1.67
snR42	snR42	NUP188	P52593	1655 aa	Known RBP	4.61	□□□□□ -1.67
snR42	snR42	GPM1	P00950	247 aa	Known RBP	4.6	□□□□□ -1.67
snR42	snR42	SPT2	P06843	333 aa	Predicted RBP	4.59	□□□□□ -1.67
snR42	snR42	YCK2	P23292	546 aa	Known RBP	4.59	□□□□□ -1.67
snR42	snR42	THI12	P42883	340 aa		4.59	□□□□□ -1.67
snR42	snR42	THI5	P43534	340 aa		4.59	□□□□□ -1.67
snR42	snR42	IML1	P47170	1584 aa		4.59	□□□□□ -1.67
snR42	snR42	THI11	P47183	340 aa		4.59	□□□□□ -1.67
snR42	snR42	IKI3	Q06706	1349 aa	Known RBP	4.59	□□□□□ -1.67
snR42	snR42	THI13	Q07748	340 aa		4.59	□□□□□ -1.67
snR42	snR42	DAT1	P13483	248 aa	Known RBP	4.58	□□□□□ -1.68
snR42	snR42	BOI2	P39969	1040 aa		4.58	□□□□□ -1.68
snR42	snR42	MRX12	P47084	519 aa		4.58	□□□□□ -1.68
snR42	snR42	YDR215C	Q12240	137 aa		4.58	□□□□□ -1.68
snR42	snR42	FPS1	P23900	669 aa		4.57	□□□□□ -1.68
snR42	snR42	AMN1	P38285	549 aa	Predicted RBP	4.57	□□□□□ -1.68
snR42	snR42	VMR1	P38735	1592 aa		4.57	□□□□□ -1.68
snR42	snR42	PDR5	P33302	1511 aa	Known RBP	4.56	□□□□□ -1.68
snR42	snR42	TY1B-NL2	Q99337	1749 aa	Known RBP	4.56	□□□□□ -1.68
snR42	snR42	SSA2	P10592	639 aa	Known RBP	4.56	□□□□□ -1.68
snR42	snR42	UTR2	P32623	467 aa		4.56	□□□□□ -1.68
snR42	snR42	MET1	P36150	593 aa		4.56	□□□□□ -1.68
snR42	snR42	ISR1	Q06098	443 aa	Known RBP	4.56	□□□□□ -1.68
snR42	snR42	TBS1	P38114	1094 aa		4.55	□□□□□ -1.68
snR42	snR42	SSM4	P40318	1319 aa		4.54	□□□□□ -1.68
snR42	snR42	PAF1	P38351	445 aa		4.54	□□□□□ -1.68
snR42	snR42	SLN1	P39928	1220 aa	Predicted RBP	4.54	□□□□□ -1.68
snR42	snR42	LSB6	P42951	607 aa		4.54	□□□□□ -1.68
snR42	snR42	APL6	P46682	809 aa		4.54	□□□□□ -1.68
snR42	snR42	HAP1	P0CE41	1502 aa		4.53	□□□□□ -1.68
snR42	snR42	KNS1	P32350	737 aa	Predicted RBP	4.53	□□□□□ -1.68
snR42	snR42	ALA1	P40825	983 aa	Known RBP	4.53	□□□□□ -1.68
snR42	snR42	SUM1	P46676	1062 aa		4.53	□□□□□ -1.68
snR42	snR42	JJJ2	P46997	583 aa		4.53	□□□□□ -1.68
snR42	snR42	RIA1	P53893	1110 aa		4.53	□□□□□ -1.68
snR42	snR42	PDC5	P16467	563 aa	Known RBP	4.52	□□□□□ -1.69
snR42	snR42	IRE1	P32361	1115 aa		4.52	□□□□□ -1.69
snR42	snR42	TAT1	P38085	619 aa		4.52	□□□□□ -1.69
snR42	snR42	UTP7	P40055	554 aa	Known RBP	4.52	□□□□□ -1.69
snR42	snR42	MCA1	Q08601	432 aa		4.52	□□□□□ -1.69
snR42	snR42	KRE5	P22023	1365 aa		4.52	□□□□□ -1.69
snR42	snR42	CSE4	P36012	229 aa		4.51	□□□□□ -1.69
snR42	snR42	MRPL16	P38064	232 aa		4.51	□□□□□ -1.69
snR42	snR42	EMP47	P43555	445 aa		4.51	□□□□□ -1.69
snR42	snR42	GCN2	P15442	1659 aa		4.51	□□□□□ -1.69
snR42	snR42	MAC1	P35192	417 aa		4.5	□□□□□ -1.69
snR42	snR42	SHM1	P37292	490 aa	Predicted RBP	4.49	□□□□□ -1.69
snR42	snR42	MCM16	Q12262	181 aa		4.49	□□□□□ -1.69
snR42	snR42	SPT5	P27692	1063 aa	Known RBP	4.48	□□□□□ -1.69
snR42	snR42	HAL5	P38970	855 aa	Known RBP	4.48	□□□□□ -1.69
snR42	snR42	SLX8	P40072	274 aa		4.48	□□□□□ -1.69
snR42	snR42	NOP7	P53261	605 aa	Known RBP	4.48	□□□□□ -1.69
snR42	snR42	CAB1	Q04430	367 aa		4.48	□□□□□ -1.69
snR42	snR42	PSH1	Q12161	406 aa		4.48	□□□□□ -1.69
snR42	snR42	STB3	Q12427	513 aa		4.48	□□□□□ -1.69
snR42	snR42	PDR11	P40550	1411 aa		4.47	□□□□□ -1.69
snR42	snR42	PDC6	P26263	563 aa	Known RBP	4.47	□□□□□ -1.69
snR42	snR42	ISF1	P32488	338 aa		4.47	□□□□□ -1.69
snR42	snR42	YNR029C	P53729	429 aa	Known RBP	4.47	□□□□□ -1.69
snR42	snR42	TY1A-DR2	Q03964	440 aa	Known RBP	4.47	□□□□□ -1.69
snR42	snR42	ATG3	P40344	310 aa		4.46	□□□□□ -1.7
snR42	snR42	SPR3	P41901	512 aa		4.46	□□□□□ -1.7
snR42	snR42	PRY1	P47032	299 aa		4.46	□□□□□ -1.7
snR42	snR42	YPL034W	Q03083	165 aa		4.46	□□□□□ -1.7
snR42	snR42	UTP13	Q05946	817 aa	Known RBP	4.46	□□□□□ -1.7
snR42	snR42	RPP1A	P05318	106 aa	Predicted RBP	4.45	□□□□□ -1.7
snR42	snR42	NAP1	P25293	417 aa	Known RBP	4.45	□□□□□ -1.7
snR42	snR42	ALD4	P46367	519 aa	Known RBP	4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 105.5 ms