RNA–Protein interactions for RNA: YPR028W

YOP1, Transcript of Membrane protein that interacts with Yip1p to mediate membrane traffic, yeast

Gene YOP1, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YOP1	YPR028W	BRE4	Q07660	1125 aa		4.93	□□□□□ -1.62
YOP1	YPR028W	ENO2	P00925	437 aa	Known RBP	4.92	□□□□□ -1.62
YOP1	YPR028W	RSC6	P25632	483 aa		4.92	□□□□□ -1.62
YOP1	YPR028W	BRL1	P38770	471 aa		4.91	□□□□□ -1.62
YOP1	YPR028W	YGR130C	P53278	816 aa		4.91	□□□□□ -1.62
YOP1	YPR028W	CUS1	Q02554	436 aa	Predicted RBP	4.91	□□□□□ -1.62
YOP1	YPR028W	CHS2	P14180	963 aa		4.9	□□□□□ -1.63
YOP1	YPR028W	BIO2	P32451	375 aa		4.9	□□□□□ -1.63
YOP1	YPR028W	SAF1	P38352	637 aa		4.9	□□□□□ -1.63
YOP1	YPR028W	NGR1	P32831	672 aa	Known RBP	4.89	□□□□□ -1.63
YOP1	YPR028W	APM2	P38700	605 aa		4.89	□□□□□ -1.63
YOP1	YPR028W	UBP5	P39944	805 aa		4.89	□□□□□ -1.63
YOP1	YPR028W	YNR040W	P53736	256 aa		4.89	□□□□□ -1.63
YOP1	YPR028W	YNL108C	P53929	270 aa		4.89	□□□□□ -1.63
YOP1	YPR028W	SLP1	Q12232	587 aa		4.89	□□□□□ -1.63
YOP1	YPR028W	RDS2	P19541	446 aa	Known RBP	4.88	□□□□□ -1.63
YOP1	YPR028W	RIM21	P48565	533 aa		4.88	□□□□□ -1.63
YOP1	YPR028W	UTP4	Q06679	776 aa	Known RBP	4.88	□□□□□ -1.63
YOP1	YPR028W	PDI1	P17967	522 aa	Known RBP	4.87	□□□□□ -1.63
YOP1	YPR028W	KAP122	P32767	1081 aa		4.87	□□□□□ -1.63
YOP1	YPR028W	MAG2	Q06436	670 aa	Known RBP	4.87	□□□□□ -1.63
YOP1	YPR028W	MRP10	O75012	95 aa		4.86	□□□□□ -1.63
YOP1	YPR028W	CYT1	P07143	309 aa		4.86	□□□□□ -1.63
YOP1	YPR028W	TY4B-P	A0A0B7P3V8	1104 aa		4.85	□□□□□ -1.63
YOP1	YPR028W	PKC1	P24583	1151 aa		4.85	□□□□□ -1.63
YOP1	YPR028W	TY1A-NL1	Q12391	440 aa	Known RBP	4.85	□□□□□ -1.63
YOP1	YPR028W	TY4A-H	Q6Q5P6	413 aa		4.85	□□□□□ -1.63
YOP1	YPR028W	TSC13	Q99190	310 aa		4.85	□□□□□ -1.63
YOP1	YPR028W	CYC7	P00045	113 aa		4.84	□□□□□ -1.63
YOP1	YPR028W	RNQ1	P25367	405 aa		4.83	□□□□□ -1.64
YOP1	YPR028W	NAM7	P30771	971 aa	Known RBP	4.83	□□□□□ -1.64
YOP1	YPR028W	AKR1	P39010	764 aa		4.83	□□□□□ -1.64
YOP1	YPR028W	SPO74	P45819	413 aa		4.83	□□□□□ -1.64
YOP1	YPR028W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
YOP1	YPR028W	IDI1	P15496	288 aa		4.82	□□□□□ -1.64
YOP1	YPR028W	RPC31	P17890	251 aa		4.82	□□□□□ -1.64
YOP1	YPR028W	SCD5	P34758	872 aa		4.82	□□□□□ -1.64
YOP1	YPR028W	TED1	P40533	473 aa		4.82	□□□□□ -1.64
YOP1	YPR028W	GIP2	P40036	548 aa		4.81	□□□□□ -1.64
YOP1	YPR028W	DSE4	P53753	1117 aa		4.81	□□□□□ -1.64
YOP1	YPR028W	REC8	Q12188	680 aa		4.79	□□□□□ -1.64
YOP1	YPR028W	HXT5	P38695	592 aa		4.78	□□□□□ -1.64
YOP1	YPR028W	YER156C	P40093	338 aa	Known RBP	4.78	□□□□□ -1.64
YOP1	YPR028W	ITC1	P53125	1264 aa		4.77	□□□□□ -1.65
YOP1	YPR028W	SOK2	P53438	785 aa	Predicted RBP	4.77	□□□□□ -1.65
YOP1	YPR028W	YCR015C	P25616	317 aa		4.76	□□□□□ -1.65
YOP1	YPR028W	YKL222C	P35995	705 aa		4.76	□□□□□ -1.65
YOP1	YPR028W	QDR2	P40474	542 aa		4.76	□□□□□ -1.65
YOP1	YPR028W	MRX10	Q05648	414 aa		4.76	□□□□□ -1.65
YOP1	YPR028W	MSB1	P21339	1137 aa	Known RBP	4.75	□□□□□ -1.65
YOP1	YPR028W	UBP1	P25037	809 aa		4.75	□□□□□ -1.65
YOP1	YPR028W	SEG2	P34250	1132 aa		4.75	□□□□□ -1.65
YOP1	YPR028W	NIT1	P40447	199 aa		4.74	□□□□□ -1.65
YOP1	YPR028W	ENO1	P00924	437 aa	Known RBP	4.73	□□□□□ -1.65
YOP1	YPR028W	LRG1	P35688	1017 aa		4.73	□□□□□ -1.65
YOP1	YPR028W	SEA4	P38164	1038 aa		4.72	□□□□□ -1.65
YOP1	YPR028W	ACS2	P52910	683 aa	Known RBP	4.72	□□□□□ -1.65
YOP1	YPR028W	YJL007C	P47080	104 aa		4.71	□□□□□ -1.66
YOP1	YPR028W	ECL1	P48235	211 aa		4.71	□□□□□ -1.66
YOP1	YPR028W	SDH1	Q00711	640 aa		4.71	□□□□□ -1.66
YOP1	YPR028W	RSC2	Q06488	889 aa		4.71	□□□□□ -1.66
YOP1	YPR028W	RQC2	Q12532	1038 aa	Known RBP	4.71	□□□□□ -1.66
YOP1	YPR028W	PHO87	P25360	923 aa		4.7	□□□□□ -1.66
YOP1	YPR028W	PEP12	P32854	288 aa		4.7	□□□□□ -1.66
YOP1	YPR028W	POL12	P38121	705 aa	Predicted RBP	4.7	□□□□□ -1.66
YOP1	YPR028W	RPN1	P38764	993 aa	Known RBP	4.7	□□□□□ -1.66
YOP1	YPR028W	YOR296W	Q08748	1289 aa		4.7	□□□□□ -1.66
YOP1	YPR028W	HAP4	P14064	554 aa		4.69	□□□□□ -1.66
YOP1	YPR028W	GAS4	Q08271	471 aa		4.69	□□□□□ -1.66
YOP1	YPR028W	PAN5	P38787	379 aa		4.68	□□□□□ -1.66
YOP1	YPR028W	YJL181W	P46987	611 aa		4.68	□□□□□ -1.66
YOP1	YPR028W	GIS1	Q03833	894 aa		4.68	□□□□□ -1.66
YOP1	YPR028W	ESC8	Q08119	714 aa		4.68	□□□□□ -1.66
YOP1	YPR028W	PRP43	P53131	767 aa	Known RBP	4.67	□□□□□ -1.66
YOP1	YPR028W	DFG16	Q99234	619 aa		4.67	□□□□□ -1.66
YOP1	YPR028W	NCE103	P53615	221 aa		4.66	□□□□□ -1.66
YOP1	YPR028W	RTG2	P32608	588 aa	Known RBP	4.65	□□□□□ -1.67
YOP1	YPR028W	MAE1	P36013	669 aa	Known RBP	4.65	□□□□□ -1.67
YOP1	YPR028W	GIP1	P38229	639 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	BSD2	P38356	321 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	DYS1	P38791	387 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	KTR7	P40504	517 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	LEM3	P42838	414 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	PPT1	P53043	513 aa		4.65	□□□□□ -1.67
YOP1	YPR028W	LEU3	P08638	886 aa		4.64	□□□□□ -1.67
YOP1	YPR028W	GCD1	P09032	578 aa	Predicted RBP	4.64	□□□□□ -1.67
YOP1	YPR028W	GAS1	P22146	559 aa	Known RBP	4.64	□□□□□ -1.67
YOP1	YPR028W	VMA3	P25515	160 aa		4.64	□□□□□ -1.67
YOP1	YPR028W	GUP1	P53154	560 aa		4.64	□□□□□ -1.67
YOP1	YPR028W	INP51	P40559	946 aa	Known RBP	4.63	□□□□□ -1.67
YOP1	YPR028W	TAF1	P46677	1066 aa		4.63	□□□□□ -1.67
YOP1	YPR028W	TIF1	P10081	395 aa	Known RBP	4.62	□□□□□ -1.67
YOP1	YPR028W	GIP4	P39732	760 aa		4.62	□□□□□ -1.67
YOP1	YPR028W	POL5	P39985	1022 aa	Known RBP	4.62	□□□□□ -1.67
YOP1	YPR028W	YIL165C	P40446	119 aa		4.62	□□□□□ -1.67
YOP1	YPR028W	CWH41	P53008	833 aa		4.62	□□□□□ -1.67
YOP1	YPR028W	ROM1	P53046	1155 aa		4.62	□□□□□ -1.67
YOP1	YPR028W	GIC2	Q06648	383 aa		4.62	□□□□□ -1.67
YOP1	YPR028W	MRPL33	P20084	86 aa		4.61	□□□□□ -1.67
YOP1	YPR028W	VAN1	P23642	535 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 43 ms