RNA–Protein interactions for RNA: YPR019W

MCM4, Transcript of Essential helicase component of heterohexameric MCM2-7 complexes, yeast

Gene MCM4, Length 2,802 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MCM4	YPR019W	RSC30	P38781	883 aa		5.76	□□□□□ -1.49
MCM4	YPR019W	UBX4	P54730	416 aa		5.76	□□□□□ -1.49
MCM4	YPR019W	YDR341C	Q05506	607 aa	Known RBP	5.76	□□□□□ -1.49
MCM4	YPR019W	RPL8A	P17076	256 aa	Known RBP	5.75	□□□□□ -1.49
MCM4	YPR019W	YHR020W	P38708	688 aa	Known RBP	5.75	□□□□□ -1.49
MCM4	YPR019W	SRB7	P47822	140 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	PRP43	P53131	767 aa	Known RBP	5.75	□□□□□ -1.49
MCM4	YPR019W	NAN1	Q02931	896 aa	Known RBP	5.75	□□□□□ -1.49
MCM4	YPR019W	PUN1	Q06991	263 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	GPI13	Q07830	1017 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	MCM16	Q12262	181 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	SSH4	P32343	579 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	PEX6	P33760	1030 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	GPP1	P41277	250 aa	Known RBP	5.75	□□□□□ -1.49
MCM4	YPR019W	REC8	Q12188	680 aa		5.75	□□□□□ -1.49
MCM4	YPR019W	SPS1	P08458	490 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	PHO87	P25360	923 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	APE4	P38821	490 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	NDE1	P40215	560 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	ERR1	P0CX10	437 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	ERR2	P0CX11	437 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	SAS3	P34218	831 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	DOT6	P40059	670 aa	Known RBP	5.74	□□□□□ -1.49
MCM4	YPR019W	ROM1	P53046	1155 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	ENV9	Q08651	330 aa		5.74	□□□□□ -1.49
MCM4	YPR019W	HOM3	P10869	527 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	SIT4	P20604	311 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	GFD2	P25370	566 aa	Known RBP	5.73	□□□□□ -1.49
MCM4	YPR019W	ANP1	P32629	500 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	BFA1	P47113	574 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	YGR237C	P50089	785 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	RSC1	P53236	928 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	NAF1	P53919	492 aa	Known RBP	5.73	□□□□□ -1.49
MCM4	YPR019W	TDA5	Q06417	326 aa	Known RBP	5.73	□□□□□ -1.49
MCM4	YPR019W	PSR1	Q07800	427 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	MRS6	P32864	603 aa	Known RBP	5.73	□□□□□ -1.49
MCM4	YPR019W	ABZ1	P37254	787 aa	Predicted RBP	5.73	□□□□□ -1.49
MCM4	YPR019W	SPC105	P53148	917 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	TGL2	P54857	326 aa		5.73	□□□□□ -1.49
MCM4	YPR019W	CDC31	P06704	161 aa	Known RBP	5.72	□□□□□ -1.49
MCM4	YPR019W	YFR006W	P43590	535 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	TRS120	Q04183	1289 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	YLR257W	Q06146	321 aa	Known RBP	5.72	□□□□□ -1.49
MCM4	YPR019W	YLR352W	Q06479	807 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	NTG2	Q08214	380 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	FLC1	Q08967	793 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	PRI2	P20457	528 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	5.72	□□□□□ -1.49	not detected
MCM4	YPR019W	SFP1	P32432	683 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	RRN3	P36070	627 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	TYW3	P53177	273 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	ATG13	Q06628	738 aa		5.72	□□□□□ -1.49
MCM4	YPR019W	CYC8	P14922	966 aa		5.71	□□□□□ -1.49
MCM4	YPR019W	URA1	P28272	314 aa	Predicted RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	RSP5	P39940	809 aa	Known RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	SPF1	P39986	1215 aa	Known RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	PEA2	P40091	420 aa		5.71	□□□□□ -1.49
MCM4	YPR019W	MVP1	P40959	511 aa	Known RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	SEC27	P41811	889 aa	Known RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	ACS2	P52910	683 aa	Known RBP	5.71	□□□□□ -1.49
MCM4	YPR019W	TCB1	Q12466	1186 aa		5.71	□□□□□ -1.49
MCM4	YPR019W	SST2	P11972	698 aa	Known RBP	5.71	□□□□□ -1.5
MCM4	YPR019W	EXO84	P38261	753 aa		5.71	□□□□□ -1.5
MCM4	YPR019W	YNL058C	P53947	316 aa		5.71	□□□□□ -1.5
MCM4	YPR019W	PLP2	Q12017	286 aa		5.71	□□□□□ -1.5
MCM4	YPR019W	SRF1	Q12516	437 aa		5.71	□□□□□ -1.5
MCM4	YPR019W	DBP1	P24784	617 aa	Known RBP	5.7	□□□□□ -1.5
MCM4	YPR019W	ISF1	P32488	338 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	CDC27	P38042	758 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	YGR122W	P53272	402 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	HOL1	P53389	586 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	TSR2	Q06672	205 aa	Known RBP	5.7	□□□□□ -1.5
MCM4	YPR019W	YOL087C	Q99247	1116 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	MPD2	Q99316	277 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	MSM1	P22438	575 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	DJP1	P40564	432 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	FAA4	P47912	694 aa	Known RBP	5.7	□□□□□ -1.5
MCM4	YPR019W	SAM37	P50110	327 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	VTI1	Q04338	217 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	HEL2	Q05580	639 aa	Known RBP	5.7	□□□□□ -1.5
MCM4	YPR019W	MSB4	Q12317	492 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	LSO1	Q3E827	93 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	CYT1	P07143	309 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	YGR016W	P53209	190 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	SPC19	Q03954	165 aa		5.7	□□□□□ -1.5
MCM4	YPR019W	RRP9	Q06506	573 aa	Known RBP	5.7	□□□□□ -1.5
MCM4	YPR019W	GCD6	P32501	712 aa	Known RBP	5.69	□□□□□ -1.5
MCM4	YPR019W	VPH1	P32563	840 aa	Known RBP	5.69	□□□□□ -1.5
MCM4	YPR019W	HLJ1	P48353	224 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	ALO1	P54783	526 aa	Known RBP	5.69	□□□□□ -1.5
MCM4	YPR019W	HAA1	Q12753	694 aa	Known RBP	5.69	□□□□□ -1.5
MCM4	YPR019W	TRZ1	P36159	838 aa	Predicted RBP	5.69	□□□□□ -1.5
MCM4	YPR019W	RXT2	P38255	430 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	SPR3	P41901	512 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	PIP2	P52960	996 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	YGR273C	P53329	174 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	COG6	P53959	839 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	YNL034W	P53963	612 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	YNL018C	P53976	612 aa		5.69	□□□□□ -1.5
MCM4	YPR019W	RKM3	P38222	552 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms