RNA–Protein interactions for RNA: YPR016C

TIF6, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene TIF6, Length 738 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF6	YPR016C	BRN1	P38170	754 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	PBY1	P38254	753 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	EPS1	P40557	701 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	YIR042C	P40586	236 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	GSM1	P42950	618 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	INM2	Q05533	292 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	TOS4	Q06266	489 aa		11.65	□□□□□ -0.54
TIF6	YPR016C	RPT3	P33298	428 aa	Known RBP	11.64	□□□□□ -0.55
TIF6	YPR016C	SQS1	P53866	767 aa	Known RBP	11.64	□□□□□ -0.55
TIF6	YPR016C	GAS5	Q08193	484 aa		11.64	□□□□□ -0.55
TIF6	YPR016C	TIF4632	P39936	914 aa	Known RBP	11.63	□□□□□ -0.55
TIF6	YPR016C	DPL1	Q05567	589 aa		11.63	□□□□□ -0.55
TIF6	YPR016C	FIG2	P25653	1609 aa		11.63	□□□□□ -0.55
TIF6	YPR016C	SSA1	P10591	642 aa	Known RBP	11.62	□□□□□ -0.55
TIF6	YPR016C	KTR1	P27810	393 aa	Known RBP	11.62	□□□□□ -0.55
TIF6	YPR016C	SHC1	P39000	512 aa		11.62	□□□□□ -0.55
TIF6	YPR016C	JJJ2	P46997	583 aa		11.62	□□□□□ -0.55
TIF6	YPR016C	GCR2	Q01722	534 aa		11.62	□□□□□ -0.55
TIF6	YPR016C	RIM20	Q12033	661 aa		11.62	□□□□□ -0.55
TIF6	YPR016C	DIP2	Q12220	943 aa	Predicted RBP	11.62	□□□□□ -0.55
TIF6	YPR016C	YMR147W	P40218	223 aa	Known RBP	11.61	□□□□□ -0.55
TIF6	YPR016C	YFH7	P43591	353 aa		11.61	□□□□□ -0.55
TIF6	YPR016C	DLD1	P32891	587 aa		11.6	□□□□□ -0.55
TIF6	YPR016C	STM1	P39015	273 aa	Known RBP	11.6	□□□□□ -0.55
TIF6	YPR016C	FPR4	Q06205	392 aa	Predicted RBP	11.6	□□□□□ -0.55
TIF6	YPR016C	PTK1	P36002	662 aa	Predicted RBP	11.59	□□□□□ -0.55
TIF6	YPR016C	HXT17	P53631	564 aa		11.59	□□□□□ -0.55
TIF6	YPR016C	PRP42	Q03776	544 aa	Known RBP	11.59	□□□□□ -0.55
TIF6	YPR016C	ATG20	Q07528	640 aa		11.59	□□□□□ -0.55
TIF6	YPR016C	RRG1	Q12167	365 aa	Predicted RBP	11.59	□□□□□ -0.55
TIF6	YPR016C	AAP1	P37898	856 aa	Known RBP	11.58	□□□□□ -0.56
TIF6	YPR016C	GRX7	P38068	203 aa		11.58	□□□□□ -0.56
TIF6	YPR016C	HXT13	P39924	564 aa		11.58	□□□□□ -0.56
TIF6	YPR016C	WRS1	Q12109	432 aa	Known RBP	11.58	□□□□□ -0.56
TIF6	YPR016C	PSF3	Q12146	194 aa		11.58	□□□□□ -0.56
TIF6	YPR016C	AFG2	P32794	780 aa		11.57	□□□□□ -0.56
TIF6	YPR016C	OSH3	P38713	996 aa	Known RBP	11.57	□□□□□ -0.56
TIF6	YPR016C	RPS9B	P05755	195 aa	Known RBP	11.56	□□□□□ -0.56
TIF6	YPR016C	ARG82	P07250	355 aa		11.56	□□□□□ -0.56
TIF6	YPR016C	MDL2	P33311	773 aa		11.56	□□□□□ -0.56
TIF6	YPR016C	SLI15	P38283	698 aa		11.56	□□□□□ -0.56
TIF6	YPR016C	MSM1	P22438	575 aa		11.55	□□□□□ -0.56
TIF6	YPR016C	FPK1	P53739	893 aa		11.55	□□□□□ -0.56
TIF6	YPR016C	CYB2	P00175	591 aa		11.54	□□□□□ -0.56
TIF6	YPR016C	RPS7A	P26786	190 aa	Known RBP	11.54	□□□□□ -0.56
TIF6	YPR016C	BOI1	P38041	980 aa	Known RBP	11.54	□□□□□ -0.56
TIF6	YPR016C	BBC1	P47068	1157 aa		11.54	□□□□□ -0.56
TIF6	YPR016C	ENP2	P48234	707 aa	Known RBP	11.54	□□□□□ -0.56
TIF6	YPR016C	FLO11	P08640	1367 aa		11.54	□□□□□ -0.56
TIF6	YPR016C	GAP1	P19145	602 aa	Predicted RBP	11.53	□□□□□ -0.56
TIF6	YPR016C	OPI1	P21957	404 aa		11.53	□□□□□ -0.56
TIF6	YPR016C	IRC8	P47046	822 aa		11.53	□□□□□ -0.56
TIF6	YPR016C	TRM44	Q02648	567 aa	Known RBP	11.53	□□□□□ -0.56
TIF6	YPR016C	KAR5	Q04746	504 aa		11.53	□□□□□ -0.56
TIF6	YPR016C	LAM4	P38800	1345 aa		11.53	□□□□□ -0.56
TIF6	YPR016C	SNF3	P10870	884 aa		11.52	□□□□□ -0.57
TIF6	YPR016C	PKH3	Q03306	898 aa	Predicted RBP	11.52	□□□□□ -0.57
TIF6	YPR016C	TAH18	Q12181	623 aa		11.52	□□□□□ -0.57
TIF6	YPR016C	PUS6	P53294	404 aa		11.51	□□□□□ -0.57
TIF6	YPR016C	SEN54	Q02825	467 aa	Predicted RBP	11.51	□□□□□ -0.57
TIF6	YPR016C	STV1	P37296	890 aa		11.5	□□□□□ -0.57
TIF6	YPR016C	APL6	P46682	809 aa		11.5	□□□□□ -0.57
TIF6	YPR016C	VPS4	P52917	437 aa		11.5	□□□□□ -0.57
TIF6	YPR016C	PIP2	P52960	996 aa		11.5	□□□□□ -0.57
TIF6	YPR016C	CRF1	Q04930	467 aa		11.5	□□□□□ -0.57
TIF6	YPR016C	ACK1	Q07622	623 aa	Predicted RBP	11.5	□□□□□ -0.57
TIF6	YPR016C	NPL4	P33755	580 aa		11.49	□□□□□ -0.57
TIF6	YPR016C	GEF1	P37020	779 aa		11.49	□□□□□ -0.57
TIF6	YPR016C	IOC3	P43596	787 aa		11.49	□□□□□ -0.57
TIF6	YPR016C	NSG2	P53898	299 aa		11.49	□□□□□ -0.57
TIF6	YPR016C	COQ1	P18900	473 aa		11.48	□□□□□ -0.57
TIF6	YPR016C	MET1	P36150	593 aa		11.48	□□□□□ -0.57
TIF6	YPR016C	YIR014W	P40570	242 aa		11.48	□□□□□ -0.57
TIF6	YPR016C	FET4	P40988	552 aa		11.48	□□□□□ -0.57
TIF6	YPR016C	KRI1	P42846	591 aa	Known RBP	11.48	□□□□□ -0.57
TIF6	YPR016C	PPM2	Q08282	695 aa		11.48	□□□□□ -0.57
TIF6	YPR016C	PGA3	Q12746	312 aa	Known RBP	11.48	□□□□□ -0.57
TIF6	YPR016C	THS1	P04801	734 aa	Known RBP	11.47	□□□□□ -0.57
TIF6	YPR016C	GLC3	P32775	704 aa		11.47	□□□□□ -0.57
TIF6	YPR016C	CIC1	P38779	376 aa	Known RBP	11.47	□□□□□ -0.57
TIF6	YPR016C	RRP8	P38961	392 aa	Known RBP	11.47	□□□□□ -0.57
TIF6	YPR016C	AIM7	Q12156	149 aa		11.47	□□□□□ -0.57
TIF6	YPR016C	RLF2	Q12495	606 aa		11.47	□□□□□ -0.57
TIF6	YPR016C	FLO1	P32768	1537 aa		11.46	□□□□□ -0.57
TIF6	YPR016C	TPM1	P17536	199 aa	Known RBP	11.46	□□□□□ -0.57
TIF6	YPR016C	TIM50	Q02776	476 aa		11.46	□□□□□ -0.57
TIF6	YPR016C	TRL1	P09880	827 aa	Known RBP	11.45	□□□□□ -0.58
TIF6	YPR016C	SLN1	P39928	1220 aa	Predicted RBP	11.45	□□□□□ -0.58
TIF6	YPR016C	CHO2	P05374	869 aa	Known RBP	11.44	□□□□□ -0.58
TIF6	YPR016C	HPR1	P17629	752 aa	Known RBP	11.44	□□□□□ -0.58
TIF6	YPR016C	IMP2'	P32351	346 aa		11.44	□□□□□ -0.58
TIF6	YPR016C	MTC3	P53077	123 aa		11.44	□□□□□ -0.58
TIF6	YPR016C	SSF2	Q12153	453 aa	Predicted RBP	11.44	□□□□□ -0.58
TIF6	YPR016C	YLR278C	Q05854	1341 aa		11.43	□□□□□ -0.58
TIF6	YPR016C	RTG2	P32608	588 aa	Known RBP	11.43	□□□□□ -0.58
TIF6	YPR016C	AIM9	P40053	627 aa	Known RBP	11.43	□□□□□ -0.58
TIF6	YPR016C	UTP7	P40055	554 aa	Known RBP	11.43	□□□□□ -0.58
TIF6	YPR016C	YJL171C	P46992	396 aa		11.43	□□□□□ -0.58
TIF6	YPR016C	YGR117C	P53270	476 aa		11.43	□□□□□ -0.58
TIF6	YPR016C	RNR2	P09938	399 aa	Known RBP	11.42	□□□□□ -0.58

Retrieved 100 of 5,963 RNA–protein pairs in 29.8 ms