RNA–Protein interactions for RNA: YPL112C

PEX25, Transcript of Peripheral peroxisomal membrane peroxin, yeast

Gene PEX25, Length 1,185 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX25	YPL112C	YGR117C	P53270	476 aa		13.01	□□□□□ -0.33
PEX25	YPL112C	PRP42	Q03776	544 aa	Known RBP	13.01	□□□□□ -0.33
PEX25	YPL112C	TOS4	Q06266	489 aa		13.01	□□□□□ -0.33
PEX25	YPL112C	ADR1	P07248	1323 aa		13.01	□□□□□ -0.33
PEX25	YPL112C	POM152	P39685	1337 aa		13	□□□□□ -0.33
PEX25	YPL112C	LCB1	P25045	558 aa	Known RBP	13	□□□□□ -0.33
PEX25	YPL112C	YNG2	P38806	282 aa	Known RBP	13	□□□□□ -0.33
PEX25	YPL112C	SPO1	P53541	631 aa		12.99	□□□□□ -0.33
PEX25	YPL112C	FUN12	P39730	1002 aa	Known RBP	12.98	□□□□□ -0.33
PEX25	YPL112C	NUG1	P40010	520 aa	Known RBP	12.98	□□□□□ -0.33
PEX25	YPL112C	ARG82	P07250	355 aa		12.97	□□□□□ -0.33
PEX25	YPL112C	RPS7A	P26786	190 aa	Known RBP	12.97	□□□□□ -0.33
PEX25	YPL112C	PEA2	P40091	420 aa		12.97	□□□□□ -0.33
PEX25	YPL112C	JJJ2	P46997	583 aa		12.97	□□□□□ -0.33
PEX25	YPL112C	YIL089W	P40500	205 aa		12.96	□□□□□ -0.33
PEX25	YPL112C	SSF1	P38789	453 aa	Predicted RBP	12.95	□□□□□ -0.34
PEX25	YPL112C	PSF3	Q12146	194 aa		12.95	□□□□□ -0.34
PEX25	YPL112C	GYP5	Q12344	894 aa		12.95	□□□□□ -0.34
PEX25	YPL112C	SEC18	P18759	758 aa	Known RBP	12.94	□□□□□ -0.34
PEX25	YPL112C	ILV3	P39522	585 aa	Known RBP	12.94	□□□□□ -0.34
PEX25	YPL112C	WRS1	Q12109	432 aa	Known RBP	12.94	□□□□□ -0.34
PEX25	YPL112C	GCD7	P32502	381 aa	Predicted RBP	12.93	□□□□□ -0.34
PEX25	YPL112C	RPT3	P33298	428 aa	Known RBP	12.93	□□□□□ -0.34
PEX25	YPL112C	CWC15	Q03772	175 aa	Known RBP	12.93	□□□□□ -0.34
PEX25	YPL112C	HGH1	P48362	394 aa	Known RBP	12.92	□□□□□ -0.34
PEX25	YPL112C	ACK1	Q07622	623 aa	Predicted RBP	12.92	□□□□□ -0.34
PEX25	YPL112C	RRI2	Q12348	645 aa		12.92	□□□□□ -0.34
PEX25	YPL112C	AI2	P03876	854 aa		12.91	□□□□□ -0.34
PEX25	YPL112C	CBP1	P07252	654 aa		12.91	□□□□□ -0.34
PEX25	YPL112C	ETP1	P38748	585 aa	Known RBP	12.91	□□□□□ -0.34
PEX25	YPL112C	PUF6	Q04373	656 aa	Known RBP	12.91	□□□□□ -0.34
PEX25	YPL112C	YFH7	P43591	353 aa		12.9	□□□□□ -0.34
PEX25	YPL112C	GLO3	P38682	493 aa	Known RBP	12.89	□□□□□ -0.35
PEX25	YPL112C	YIR042C	P40586	236 aa		12.89	□□□□□ -0.35
PEX25	YPL112C	YNL193W	P53870	558 aa		12.89	□□□□□ -0.35
PEX25	YPL112C	NCB2	Q92317	146 aa		12.89	□□□□□ -0.35
PEX25	YPL112C	UTP7	P40055	554 aa	Known RBP	12.88	□□□□□ -0.35
PEX25	YPL112C	POL32	P47110	350 aa		12.88	□□□□□ -0.35
PEX25	YPL112C	MTC3	P53077	123 aa		12.88	□□□□□ -0.35
PEX25	YPL112C	RPN7	Q06103	429 aa	Known RBP	12.88	□□□□□ -0.35
PEX25	YPL112C	INM2	Q05533	292 aa		12.87	□□□□□ -0.35
PEX25	YPL112C	GSC2	P40989	1895 aa		12.87	□□□□□ -0.35
PEX25	YPL112C	PUS6	P53294	404 aa		12.86	□□□□□ -0.35
PEX25	YPL112C	PIF1	P07271	859 aa		12.85	□□□□□ -0.35
PEX25	YPL112C	PTK1	P36002	662 aa	Predicted RBP	12.85	□□□□□ -0.35
PEX25	YPL112C	HAL5	P38970	855 aa	Known RBP	12.85	□□□□□ -0.35
PEX25	YPL112C	TYW1	Q08960	810 aa	Known RBP	12.85	□□□□□ -0.35
PEX25	YPL112C	SPT21	P35209	758 aa		12.84	□□□□□ -0.35
PEX25	YPL112C	NMD2	P38798	1089 aa	Known RBP	12.84	□□□□□ -0.35
PEX25	YPL112C	DUS1	P53759	423 aa	Known RBP	12.84	□□□□□ -0.35
PEX25	YPL112C	TOM1	Q03280	3268 aa		12.84	□□□□□ -0.35
PEX25	YPL112C	MDL2	P33311	773 aa		12.83	□□□□□ -0.36
PEX25	YPL112C	PNT1	P38969	423 aa		12.83	□□□□□ -0.36
PEX25	YPL112C	YJL171C	P46992	396 aa		12.83	□□□□□ -0.36
PEX25	YPL112C	FLO1	P32768	1537 aa		12.83	□□□□□ -0.36
PEX25	YPL112C	BDP1	P46678	594 aa		12.82	□□□□□ -0.36
PEX25	YPL112C	APL6	P46682	809 aa		12.82	□□□□□ -0.36
PEX25	YPL112C	SNF3	P10870	884 aa		12.81	□□□□□ -0.36
PEX25	YPL112C	NIT1	P40447	199 aa		12.81	□□□□□ -0.36
PEX25	YPL112C	CSR2	Q12734	1121 aa		12.81	□□□□□ -0.36
PEX25	YPL112C	KTR3	P38130	404 aa	Predicted RBP	12.8	□□□□□ -0.36
PEX25	YPL112C	RRT6	P53117	311 aa	Predicted RBP	12.8	□□□□□ -0.36
PEX25	YPL112C	YGL242C	P53066	181 aa		12.79	□□□□□ -0.36
PEX25	YPL112C	PDR18	P53756	1333 aa		12.79	□□□□□ -0.36
PEX25	YPL112C	GAL2	P13181	574 aa		12.78	□□□□□ -0.36
PEX25	YPL112C	BSD2	P38356	321 aa		12.78	□□□□□ -0.36
PEX25	YPL112C	NOT3	P06102	836 aa	Known RBP	12.77	□□□□□ -0.37
PEX25	YPL112C	HVG1	P0CE11	249 aa		12.77	□□□□□ -0.37
PEX25	YPL112C	PCS60	P38137	543 aa	Known RBP RIP-Chip data	12.77	□□□□□ -0.37	not detected
PEX25	YPL112C	MLC1	P53141	149 aa		12.77	□□□□□ -0.37
PEX25	YPL112C	BOI1	P38041	980 aa	Known RBP	12.76	□□□□□ -0.37
PEX25	YPL112C	TIF6	Q12522	245 aa	Known RBP	12.76	□□□□□ -0.37
PEX25	YPL112C	HAA1	Q12753	694 aa	Known RBP	12.76	□□□□□ -0.37
PEX25	YPL112C	CYB2	P00175	591 aa		12.75	□□□□□ -0.37
PEX25	YPL112C	MRPL32	P25348	183 aa		12.75	□□□□□ -0.37
PEX25	YPL112C	NSG2	P53898	299 aa		12.75	□□□□□ -0.37
PEX25	YPL112C	GRX7	P38068	203 aa		12.74	□□□□□ -0.37
PEX25	YPL112C	ECM21	P38167	1117 aa	Known RBP	12.74	□□□□□ -0.37
PEX25	YPL112C	KEL1	P38853	1164 aa	Known RBP	12.74	□□□□□ -0.37
PEX25	YPL112C	YCK3	P39962	524 aa		12.74	□□□□□ -0.37
PEX25	YPL112C	PIP2	P52960	996 aa		12.74	□□□□□ -0.37
PEX25	YPL112C	ALO1	P54783	526 aa	Known RBP	12.74	□□□□□ -0.37
PEX25	YPL112C	ADP1	P25371	1049 aa		12.73	□□□□□ -0.37
PEX25	YPL112C	EPS1	P40557	701 aa		12.73	□□□□□ -0.37
PEX25	YPL112C	PMA1	P05030	918 aa	Known RBP	12.72	□□□□□ -0.37
PEX25	YPL112C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	12.72	□□□□□ -0.37	not detected
PEX25	YPL112C	RAD53	P22216	821 aa		12.72	□□□□□ -0.37
PEX25	YPL112C	CST9	Q06032	482 aa		12.72	□□□□□ -0.37
PEX25	YPL112C	TPS3	P38426	1054 aa	Known RBP	12.71	□□□□□ -0.37
PEX25	YPL112C	YMR147W	P40218	223 aa	Known RBP	12.71	□□□□□ -0.37
PEX25	YPL112C	PEX29	Q03370	554 aa		12.71	□□□□□ -0.37
PEX25	YPL112C	GIN4	Q12263	1142 aa		12.71	□□□□□ -0.37
PEX25	YPL112C	SRF1	Q12516	437 aa		12.7	□□□□□ -0.38
PEX25	YPL112C	PBY1	P38254	753 aa		12.69	□□□□□ -0.38
PEX25	YPL112C	RMD1	Q03441	430 aa		12.69	□□□□□ -0.38
PEX25	YPL112C	GEF1	P37020	779 aa		12.68	□□□□□ -0.38
PEX25	YPL112C	APE3	P37302	537 aa	Known RBP	12.67	□□□□□ -0.38
PEX25	YPL112C	YBL028C	P38202	106 aa		12.67	□□□□□ -0.38
PEX25	YPL112C	RFC1	P38630	861 aa	Known RBP	12.67	□□□□□ -0.38
PEX25	YPL112C	RSC30	P38781	883 aa		12.67	□□□□□ -0.38

Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms