RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W CCT8P47079 568 aaKnown RBP8.51□□□□□ -1.05
VPS28YPL065W UBX7P38349 436 aa8.48□□□□□ -1.05
VPS28YPL065W CPS1P27614 576 aa8.47□□□□□ -1.05
VPS28YPL065W CUS1Q02554 436 aaPredicted RBP8.47□□□□□ -1.05
VPS28YPL065W APM2P38700 605 aa8.46□□□□□ -1.06
VPS28YPL065W RPC31P17890 251 aa8.44□□□□□ -1.06
VPS28YPL065W QDR2P40474 542 aa8.43□□□□□ -1.06
VPS28YPL065W PUF6Q04373 656 aaKnown RBP8.43□□□□□ -1.06
VPS28YPL065W CAB1Q04430 367 aa8.43□□□□□ -1.06
VPS28YPL065W SSA4P22202 642 aaKnown RBP8.42□□□□□ -1.06
VPS28YPL065W NHA1Q99271 985 aa8.42□□□□□ -1.06
VPS28YPL065W PUP1P25043 261 aa8.41□□□□□ -1.06
VPS28YPL065W PRK1P40494 810 aa8.41□□□□□ -1.06
VPS28YPL065W YDR215CQ12240 137 aa8.41□□□□□ -1.06
VPS28YPL065W MRPL33P20084 86 aa8.4□□□□□ -1.06
VPS28YPL065W SUV3P32580 737 aa8.4□□□□□ -1.06
VPS28YPL065W ALG14P38242 237 aa8.4□□□□□ -1.06
VPS28YPL065W DYS1P38791 387 aa8.4□□□□□ -1.06
VPS28YPL065W SBP1P10080 294 aaKnown RBP8.39□□□□□ -1.07
VPS28YPL065W YCK2P23292 546 aaKnown RBP8.39□□□□□ -1.07
VPS28YPL065W TAT1P38085 619 aa8.39□□□□□ -1.07
VPS28YPL065W FOX2Q02207 900 aaKnown RBP8.39□□□□□ -1.07
VPS28YPL065W PGM2P37012 569 aaKnown RBP8.38□□□□□ -1.07
VPS28YPL065W TPS3P38426 1054 aaKnown RBP8.38□□□□□ -1.07
VPS28YPL065W VMA3P25515 160 aa8.37□□□□□ -1.07
VPS28YPL065W NAB2P32505 525 aaKnown RBP RIP-Chip data8.36□□□□□ -1.07not detected
VPS28YPL065W LDH1P38139 375 aa8.36□□□□□ -1.07
VPS28YPL065W YBR197CP38306 217 aa8.36□□□□□ -1.07
VPS28YPL065W ALD4P46367 519 aaKnown RBP8.36□□□□□ -1.07
VPS28YPL065W YNR040WP53736 256 aa8.36□□□□□ -1.07
VPS28YPL065W PUN1Q06991 263 aa8.36□□□□□ -1.07
VPS28YPL065W YOR296WQ08748 1289 aa8.36□□□□□ -1.07
VPS28YPL065W SLN1P39928 1220 aaPredicted RBP8.35□□□□□ -1.07
VPS28YPL065W SRS2P12954 1174 aa8.34□□□□□ -1.07
VPS28YPL065W YER156CP40093 338 aaKnown RBP8.34□□□□□ -1.07
VPS28YPL065W GIS4Q04233 774 aa8.34□□□□□ -1.07
VPS28YPL065W GIP1P38229 639 aa8.33□□□□□ -1.08
VPS28YPL065W NAR1P23503 491 aaKnown RBP8.32□□□□□ -1.08
VPS28YPL065W YBR287WP38355 427 aa8.32□□□□□ -1.08
VPS28YPL065W ITC1P53125 1264 aa8.32□□□□□ -1.08
VPS28YPL065W IDI1P15496 288 aa8.31□□□□□ -1.08
VPS28YPL065W ISC10P32645 267 aa8.31□□□□□ -1.08
VPS28YPL065W ISW1P38144 1129 aa8.31□□□□□ -1.08
VPS28YPL065W PRY1P47032 299 aa8.31□□□□□ -1.08
VPS28YPL065W RSC2Q06488 889 aa8.31□□□□□ -1.08
VPS28YPL065W AMN1P38285 549 aaPredicted RBP8.3□□□□□ -1.08
VPS28YPL065W LSB6P42951 607 aa8.3□□□□□ -1.08
VPS28YPL065W SLP1Q12232 587 aa8.3□□□□□ -1.08
VPS28YPL065W BUD9P53226 547 aa8.28□□□□□ -1.08
VPS28YPL065W CWC15Q03772 175 aaKnown RBP8.28□□□□□ -1.08
VPS28YPL065W MCA1Q08601 432 aa8.28□□□□□ -1.08
VPS28YPL065W RRN6P32786 894 aa8.27□□□□□ -1.09
VPS28YPL065W BSD2P38356 321 aa8.27□□□□□ -1.09
VPS28YPL065W FIR1P40020 876 aa8.26□□□□□ -1.09
VPS28YPL065W YML083CQ04526 418 aa8.26□□□□□ -1.09
VPS28YPL065W NOB1Q08444 459 aaKnown RBP8.26□□□□□ -1.09
VPS28YPL065W NRD1P53617 575 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09 RIP-Chip
VPS28YPL065W YPL034WQ03083 165 aa8.25□□□□□ -1.09
VPS28YPL065W RRM3P38766 723 aa8.24□□□□□ -1.09
VPS28YPL065W AI3P03877 415 aa8.23□□□□□ -1.09
VPS28YPL065W MSN1P22148 382 aa8.23□□□□□ -1.09
VPS28YPL065W PNP1Q05788 311 aa8.23□□□□□ -1.09
VPS28YPL065W YIL165CP40446 119 aa8.22□□□□□ -1.09
VPS28YPL065W HXT8P40886 569 aa8.22□□□□□ -1.09
VPS28YPL065W MRP10O75012 95 aa8.21□□□□□ -1.1
VPS28YPL065W SAC7P17121 654 aa8.21□□□□□ -1.1
VPS28YPL065W SFA1P32771 386 aa8.21□□□□□ -1.1
VPS28YPL065W PPT1P53043 513 aa8.2□□□□□ -1.1
VPS28YPL065W ARI1P53111 347 aaKnown RBP8.18□□□□□ -1.1
VPS28YPL065W GIP2P40036 548 aa8.17□□□□□ -1.1
VPS28YPL065W YJL181WP46987 611 aa8.17□□□□□ -1.1
VPS28YPL065W SUB2Q07478 446 aaKnown RBP8.17□□□□□ -1.1
VPS28YPL065W TY4B-PA0A0B7P3V8 1104 aa8.16□□□□□ -1.1
VPS28YPL065W AIM46P38885 310 aa8.16□□□□□ -1.1
VPS28YPL065W SOK2P53438 785 aaPredicted RBP8.16□□□□□ -1.1
VPS28YPL065W EMG1Q06287 252 aaKnown RBP8.16□□□□□ -1.1
VPS28YPL065W TY4A-HQ6Q5P6 413 aa8.16□□□□□ -1.1
VPS28YPL065W FUR4P05316 633 aaKnown RBP8.15□□□□□ -1.1
VPS28YPL065W LEM3P42838 414 aa8.15□□□□□ -1.1
VPS28YPL065W DSE4P53753 1117 aa8.15□□□□□ -1.1
VPS28YPL065W GAS5Q08193 484 aa8.15□□□□□ -1.1
VPS28YPL065W APC11Q12157 165 aa8.15□□□□□ -1.1
VPS28YPL065W RSC6P25632 483 aa8.14□□□□□ -1.11
VPS28YPL065W TED1P40533 473 aa8.14□□□□□ -1.11
VPS28YPL065W INP51P40559 946 aaKnown RBP8.14□□□□□ -1.11
VPS28YPL065W SUT1P53032 299 aaKnown RBP8.14□□□□□ -1.11
VPS28YPL065W LSO1Q3E827 93 aa8.14□□□□□ -1.11
VPS28YPL065W SMC1P32908 1225 aa8.13□□□□□ -1.11
VPS28YPL065W NTA1P40354 457 aa8.13□□□□□ -1.11
VPS28YPL065W GUP1P53154 560 aa8.13□□□□□ -1.11
VPS28YPL065W COQ2P32378 372 aa8.12□□□□□ -1.11
VPS28YPL065W PGM1P33401 570 aaKnown RBP8.12□□□□□ -1.11
VPS28YPL065W MAC1P35192 417 aa8.12□□□□□ -1.11
VPS28YPL065W RGD2P43556 714 aa8.11□□□□□ -1.11
VPS28YPL065W RAD55P38953 406 aa8.1□□□□□ -1.11
VPS28YPL065W BIO5P53744 561 aaKnown RBP8.1□□□□□ -1.11
VPS28YPL065W FUS1P11710 512 aa8.09□□□□□ -1.11
VPS28YPL065W BOI1P38041 980 aaKnown RBP8.09□□□□□ -1.11
VPS28YPL065W SOG2Q08817 791 aa8.09□□□□□ -1.11
VPS28YPL065W GLT1Q12680 2145 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms