RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	THR4	P16120	514 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	PET123	P17558	318 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	CDC3	P32457	520 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	PIM1	P36775	1133 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	NPR3	P38742	1146 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	MVP1	P40959	511 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	POL32	P47110	350 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	INP52	P50942	1183 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	INP2	Q03824	705 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	GYL1	Q04322	720 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	VPS5	Q92331	675 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	YML133C	Q03099	1374 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	YLL067C	Q07888	1374 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	YLL066C	Q99208	1374 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	GAP1	P19145	602 aa	Predicted RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	GCD6	P32501	712 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	MFT1	P33441	392 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	MRPL10	P36520	322 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	ORC6	P38826	435 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	MTR4	P47047	1073 aa	Known RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	PRP31	P49704	494 aa	Predicted RBP	4.24	□□□□□ -1.73
ABP140	YOR239W	RCF1	Q03713	159 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	AOS1	Q06624	347 aa		4.24	□□□□□ -1.73
ABP140	YOR239W	SNF2	P22082	1703 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	HAP1	P0CE41	1502 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	HTA1	P04911	132 aa	Known RBP	4.23	□□□□□ -1.73
ABP140	YOR239W	HTA2	P04912	132 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	EFB1	P32471	206 aa	Known RBP	4.23	□□□□□ -1.73
ABP140	YOR239W	YME2	P32843	850 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	MNR2	P35724	969 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	PTC4	P38089	393 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	YEL023C	P39992	682 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	SEC26	P41810	973 aa	Known RBP	4.23	□□□□□ -1.73
ABP140	YOR239W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
ABP140	YOR239W	CCM1	P48237	864 aa	Predicted RBP	4.23	□□□□□ -1.73
ABP140	YOR239W	RRB1	Q04225	511 aa	Known RBP	4.23	□□□□□ -1.73
ABP140	YOR239W	NKP1	Q12493	238 aa		4.23	□□□□□ -1.73
ABP140	YOR239W	TAF13	P11747	167 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	RPL5	P26321	297 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	SLD2	P34252	453 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	BRN1	P38170	754 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	LAM1	P38851	1228 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	PET100	P38958	111 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	BEM4	P39011	633 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	HYR1	P40581	163 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	YRB1	P41920	201 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	SHE4	P51534	789 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	YGL082W	P53155	381 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	IST1	P53843	298 aa	Predicted RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	ADE12	P80210	433 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	PUF6	Q04373	656 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	LSO1	Q3E827	93 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	TIF3	P34167	436 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
ABP140	YOR239W	RFC5	P38251	354 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	SLI15	P38283	698 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	YIL092W	P40497	633 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	CTK3	P46963	296 aa	Predicted RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	NPA3	P47122	385 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	HUL5	P53119	910 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	HOT1	Q03213	719 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	VMS1	Q04311	632 aa	Known RBP	4.22	□□□□□ -1.73
ABP140	YOR239W	PSR1	Q07800	427 aa		4.22	□□□□□ -1.73
ABP140	YOR239W	CDC37	P06101	506 aa	Known RBP	4.21	□□□□□ -1.74
ABP140	YOR239W	RAD54	P32863	898 aa		4.21	□□□□□ -1.74
ABP140	YOR239W	CWH41	P53008	833 aa		4.21	□□□□□ -1.74
ABP140	YOR239W	HRQ1	Q05549	1077 aa		4.21	□□□□□ -1.74
ABP140	YOR239W	RTC1	Q08281	1341 aa		4.21	□□□□□ -1.74
ABP140	YOR239W	YBT1	P32386	1661 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	ELM1	P32801	640 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	RPC37	P36121	282 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	GUA1	P38625	525 aa	Known RBP	4.2	□□□□□ -1.74
ABP140	YOR239W	SPR3	P41901	512 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	SUM1	P46676	1062 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	ALD2	P47771	506 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	HST2	P53686	357 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	COG4	Q06096	861 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	CMS1	Q07897	291 aa	Known RBP	4.2	□□□□□ -1.74
ABP140	YOR239W	CIR2	Q08822	631 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	APC11	Q12157	165 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	TY1B-BR	Q12193	1756 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	TY1B-GR3	Q12316	1755 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	TY1B-OR	Q92393	1755 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	DAL5	P15365	543 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	HEL1	P36113	551 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	RGD1	P38339	666 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	ERC1	P38767	581 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
ABP140	YOR239W	YJR142W	P47173	342 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	LCB5	Q06147	687 aa	Known RBP	4.2	□□□□□ -1.74
ABP140	YOR239W	ATG26	Q06321	1198 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	ABP140	Q08641	628 aa	Known RBP	4.2	□□□□□ -1.74
ABP140	YOR239W	SLX4	Q12098	748 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	SMC6	Q12749	1114 aa		4.2	□□□□□ -1.74
ABP140	YOR239W	PSK1	P31374	1356 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	RGR1	P19263	1082 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	TPD3	P31383	635 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	KAR9	P32526	644 aa		4.19	□□□□□ -1.74
ABP140	YOR239W	RRP1	P35178	278 aa	Predicted RBP	4.19	□□□□□ -1.74
ABP140	YOR239W	TAF1	P46677	1066 aa		4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 122.1 ms