RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	RAD50	P12753	1312 aa		13.91	□□□□□ -0.18
DED1	YOR204W	GSM1	P42950	618 aa		13.9	□□□□□ -0.18
DED1	YOR204W	BRN1	P38170	754 aa		13.89	□□□□□ -0.19
DED1	YOR204W	SQS1	P53866	767 aa	Known RBP	13.88	□□□□□ -0.19
DED1	YOR204W	INM2	Q05533	292 aa		13.88	□□□□□ -0.19
DED1	YOR204W	NUG1	P40010	520 aa	Known RBP	13.87	□□□□□ -0.19
DED1	YOR204W	SSA1	P10591	642 aa	Known RBP	13.87	□□□□□ -0.19
DED1	YOR204W	DPL1	Q05567	589 aa		13.87	□□□□□ -0.19
DED1	YOR204W	DIP2	Q12220	943 aa	Predicted RBP	13.87	□□□□□ -0.19
DED1	YOR204W	VAS1	P07806	1104 aa	Known RBP	13.86	□□□□□ -0.19
DED1	YOR204W	YMR147W	P40218	223 aa	Known RBP	13.86	□□□□□ -0.19
DED1	YOR204W	BRE1	Q07457	700 aa	Known RBP	13.86	□□□□□ -0.19
DED1	YOR204W	RIM20	Q12033	661 aa		13.85	□□□□□ -0.19
DED1	YOR204W	PBY1	P38254	753 aa		13.84	□□□□□ -0.19
DED1	YOR204W	HXT17	P53631	564 aa		13.84	□□□□□ -0.19
DED1	YOR204W	KTR1	P27810	393 aa	Known RBP	13.83	□□□□□ -0.2
DED1	YOR204W	SHC1	P39000	512 aa		13.83	□□□□□ -0.2
DED1	YOR204W	UBX2	Q04228	584 aa		13.83	□□□□□ -0.2
DED1	YOR204W	FLO11	P08640	1367 aa		13.83	□□□□□ -0.2
DED1	YOR204W	PIF1	P07271	859 aa		13.83	□□□□□ -0.2
DED1	YOR204W	HXT13	P39924	564 aa		13.83	□□□□□ -0.2
DED1	YOR204W	GCR2	Q01722	534 aa		13.83	□□□□□ -0.2
DED1	YOR204W	GRX7	P38068	203 aa		13.82	□□□□□ -0.2
DED1	YOR204W	GAP1	P19145	602 aa	Predicted RBP	13.81	□□□□□ -0.2
DED1	YOR204W	DLD1	P32891	587 aa		13.81	□□□□□ -0.2
DED1	YOR204W	PTK1	P36002	662 aa	Predicted RBP	13.81	□□□□□ -0.2
DED1	YOR204W	AAP1	P37898	856 aa	Known RBP	13.8	□□□□□ -0.2
DED1	YOR204W	YFH7	P43591	353 aa		13.8	□□□□□ -0.2
DED1	YOR204W	JJJ2	P46997	583 aa		13.8	□□□□□ -0.2
DED1	YOR204W	PRP42	Q03776	544 aa	Known RBP	13.8	□□□□□ -0.2
DED1	YOR204W	ATG20	Q07528	640 aa		13.8	□□□□□ -0.2
DED1	YOR204W	WRS1	Q12109	432 aa	Known RBP	13.8	□□□□□ -0.2
DED1	YOR204W	AFG2	P32794	780 aa		13.8	□□□□□ -0.2
DED1	YOR204W	ARG82	P07250	355 aa		13.79	□□□□□ -0.2
DED1	YOR204W	RPS7A	P26786	190 aa	Known RBP	13.78	□□□□□ -0.2
DED1	YOR204W	STM1	P39015	273 aa	Known RBP	13.78	□□□□□ -0.2
DED1	YOR204W	TIF4632	P39936	914 aa	Known RBP	13.78	□□□□□ -0.2
DED1	YOR204W	RRG1	Q12167	365 aa	Predicted RBP	13.78	□□□□□ -0.2
DED1	YOR204W	LAM4	P38800	1345 aa		13.77	□□□□□ -0.2
DED1	YOR204W	FPR4	Q06205	392 aa	Predicted RBP	13.77	□□□□□ -0.21
DED1	YOR204W	STV1	P37296	890 aa		13.76	□□□□□ -0.21
DED1	YOR204W	BBC1	P47068	1157 aa		13.76	□□□□□ -0.21
DED1	YOR204W	PKH3	Q03306	898 aa	Predicted RBP	13.76	□□□□□ -0.21
DED1	YOR204W	SNF3	P10870	884 aa		13.76	□□□□□ -0.21
DED1	YOR204W	MDL2	P33311	773 aa		13.76	□□□□□ -0.21
DED1	YOR204W	SLI15	P38283	698 aa		13.76	□□□□□ -0.21
DED1	YOR204W	NSG2	P53898	299 aa		13.76	□□□□□ -0.21
DED1	YOR204W	KAR5	Q04746	504 aa		13.76	□□□□□ -0.21
DED1	YOR204W	VPS4	P52917	437 aa		13.75	□□□□□ -0.21
DED1	YOR204W	FPK1	P53739	893 aa		13.75	□□□□□ -0.21
DED1	YOR204W	MSM1	P22438	575 aa		13.73	□□□□□ -0.21
DED1	YOR204W	BOI1	P38041	980 aa	Known RBP	13.73	□□□□□ -0.21
DED1	YOR204W	TRM44	Q02648	567 aa	Known RBP	13.73	□□□□□ -0.21
DED1	YOR204W	PSF3	Q12146	194 aa		13.73	□□□□□ -0.21
DED1	YOR204W	FLO1	P32768	1537 aa		13.73	□□□□□ -0.21
DED1	YOR204W	OSH3	P38713	996 aa	Known RBP	13.72	□□□□□ -0.21
DED1	YOR204W	IRC8	P47046	822 aa		13.72	□□□□□ -0.21
DED1	YOR204W	CYB2	P00175	591 aa		13.71	□□□□□ -0.21
DED1	YOR204W	TOM1	Q03280	3268 aa		13.71	□□□□□ -0.22
DED1	YOR204W	PUS6	P53294	404 aa		13.71	□□□□□ -0.22
DED1	YOR204W	PPM2	Q08282	695 aa		13.71	□□□□□ -0.22
DED1	YOR204W	PGA3	Q12746	312 aa	Known RBP	13.7	□□□□□ -0.22
DED1	YOR204W	OPI1	P21957	404 aa		13.69	□□□□□ -0.22
DED1	YOR204W	TAH18	Q12181	623 aa		13.69	□□□□□ -0.22
DED1	YOR204W	GSC2	P40989	1895 aa		13.69	□□□□□ -0.22
DED1	YOR204W	THS1	P04801	734 aa	Known RBP	13.69	□□□□□ -0.22
DED1	YOR204W	RPS9B	P05755	195 aa	Known RBP	13.69	□□□□□ -0.22
DED1	YOR204W	FET4	P40988	552 aa		13.69	□□□□□ -0.22
DED1	YOR204W	CHO2	P05374	869 aa	Known RBP	13.68	□□□□□ -0.22
DED1	YOR204W	TRL1	P09880	827 aa	Known RBP	13.68	□□□□□ -0.22
DED1	YOR204W	COQ1	P18900	473 aa		13.68	□□□□□ -0.22
DED1	YOR204W	APL6	P46682	809 aa		13.67	□□□□□ -0.22
DED1	YOR204W	UTP7	P40055	554 aa	Known RBP	13.67	□□□□□ -0.22
DED1	YOR204W	MTC3	P53077	123 aa		13.67	□□□□□ -0.22
DED1	YOR204W	SEN54	Q02825	467 aa	Predicted RBP	13.67	□□□□□ -0.22
DED1	YOR204W	ACK1	Q07622	623 aa	Predicted RBP	13.67	□□□□□ -0.22
DED1	YOR204W	YLR278C	Q05854	1341 aa		13.66	□□□□□ -0.22
DED1	YOR204W	IOC3	P43596	787 aa		13.66	□□□□□ -0.22
DED1	YOR204W	RLF2	Q12495	606 aa		13.66	□□□□□ -0.22
DED1	YOR204W	HPR1	P17629	752 aa	Known RBP	13.65	□□□□□ -0.22
DED1	YOR204W	GLC3	P32775	704 aa		13.65	□□□□□ -0.22
DED1	YOR204W	CIC1	P38779	376 aa	Known RBP	13.65	□□□□□ -0.22
DED1	YOR204W	YIR014W	P40570	242 aa		13.65	□□□□□ -0.22
DED1	YOR204W	YJL171C	P46992	396 aa		13.65	□□□□□ -0.22
DED1	YOR204W	CRF1	Q04930	467 aa		13.65	□□□□□ -0.22
DED1	YOR204W	ENP2	P48234	707 aa	Known RBP	13.64	□□□□□ -0.23
DED1	YOR204W	PIP2	P52960	996 aa		13.64	□□□□□ -0.23
DED1	YOR204W	MET1	P36150	593 aa		13.64	□□□□□ -0.23
DED1	YOR204W	YGR117C	P53270	476 aa		13.64	□□□□□ -0.23
DED1	YOR204W	YHL050C	P38721	697 aa		13.63	□□□□□ -0.23
DED1	YOR204W	AIM9	P40053	627 aa	Known RBP	13.63	□□□□□ -0.23
DED1	YOR204W	PUS5	Q06244	254 aa		13.63	□□□□□ -0.23
DED1	YOR204W	NPL4	P33755	580 aa		13.62	□□□□□ -0.23
DED1	YOR204W	TIM50	Q02776	476 aa		13.62	□□□□□ -0.23
DED1	YOR204W	AIM7	Q12156	149 aa		13.62	□□□□□ -0.23
DED1	YOR204W	RTG2	P32608	588 aa	Known RBP	13.62	□□□□□ -0.23
DED1	YOR204W	GEF1	P37020	779 aa		13.62	□□□□□ -0.23
DED1	YOR204W	KRI1	P42846	591 aa	Known RBP	13.62	□□□□□ -0.23
DED1	YOR204W	IMP2'	P32351	346 aa		13.61	□□□□□ -0.23
DED1	YOR204W	HDA1	P53973	706 aa		13.6	□□□□□ -0.23

Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms