RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W IRC4Q03036 179 aa8.18□□□□□ -1.1
LSC1YOR142W UBX2Q04228 584 aa8.18□□□□□ -1.1
LSC1YOR142W SNU66Q12420 587 aaPredicted RBP8.18□□□□□ -1.1
LSC1YOR142W RAD2P07276 1031 aa8.17□□□□□ -1.1
LSC1YOR142W GLC3P32775 704 aa8.17□□□□□ -1.1
LSC1YOR142W YNG2P38806 282 aaKnown RBP8.17□□□□□ -1.1
LSC1YOR142W TIF4632P39936 914 aaKnown RBP8.17□□□□□ -1.1
LSC1YOR142W TRM44Q02648 567 aaKnown RBP8.17□□□□□ -1.1
LSC1YOR142W SRC1Q03707 834 aa8.17□□□□□ -1.1
LSC1YOR142W SUP35P05453 685 aaKnown RBP8.16□□□□□ -1.1
LSC1YOR142W POM152P39685 1337 aa8.16□□□□□ -1.1
LSC1YOR142W TIM50Q02776 476 aa8.16□□□□□ -1.1
LSC1YOR142W RRG1Q12167 365 aaPredicted RBP8.16□□□□□ -1.1
LSC1YOR142W AI2P03876 854 aa8.15□□□□□ -1.1
LSC1YOR142W OXP1P28273 1286 aa8.15□□□□□ -1.1
LSC1YOR142W GCD7P32502 381 aaPredicted RBP8.15□□□□□ -1.1
LSC1YOR142W SEC18P18759 758 aaKnown RBP8.14□□□□□ -1.11
LSC1YOR142W VHR2P40041 505 aa8.14□□□□□ -1.11
LSC1YOR142W RRD1P40454 393 aaKnown RBP8.14□□□□□ -1.11
LSC1YOR142W YGR117CP53270 476 aa8.14□□□□□ -1.11
LSC1YOR142W PRP42Q03776 544 aaKnown RBP8.14□□□□□ -1.11
LSC1YOR142W AIM7Q12156 149 aa8.14□□□□□ -1.11
LSC1YOR142W GYP5Q12344 894 aa8.14□□□□□ -1.11
LSC1YOR142W ARG82P07250 355 aa8.13□□□□□ -1.11
LSC1YOR142W HPR1P17629 752 aaKnown RBP8.13□□□□□ -1.11
LSC1YOR142W RPS7AP26786 190 aaKnown RBP8.13□□□□□ -1.11
LSC1YOR142W EMP47P43555 445 aa8.13□□□□□ -1.11
LSC1YOR142W POL32P47110 350 aa8.13□□□□□ -1.11
LSC1YOR142W RPT3P33298 428 aaKnown RBP8.12□□□□□ -1.11
LSC1YOR142W GLO3P38682 493 aaKnown RBP8.12□□□□□ -1.11
LSC1YOR142W PUF6Q04373 656 aaKnown RBP8.12□□□□□ -1.11
LSC1YOR142W RPN7Q06103 429 aaKnown RBP8.12□□□□□ -1.11
LSC1YOR142W WRS1Q12109 432 aaKnown RBP8.12□□□□□ -1.11
LSC1YOR142W NUG1P40010 520 aaKnown RBP8.11□□□□□ -1.11
LSC1YOR142W UTP7P40055 554 aaKnown RBP8.11□□□□□ -1.11
LSC1YOR142W YNL193WP53870 558 aa8.11□□□□□ -1.11
LSC1YOR142W CRF1Q04930 467 aa8.11□□□□□ -1.11
LSC1YOR142W FLO1P32768 1537 aa8.1□□□□□ -1.11
LSC1YOR142W KTR3P38130 404 aaPredicted RBP8.1□□□□□ -1.11
LSC1YOR142W SSF1P38789 453 aaPredicted RBP8.1□□□□□ -1.11
LSC1YOR142W HAL5P38970 855 aaKnown RBP8.1□□□□□ -1.11
LSC1YOR142W YIL089WP40500 205 aa8.1□□□□□ -1.11
LSC1YOR142W YIR042CP40586 236 aa8.1□□□□□ -1.11
LSC1YOR142W JJJ2P46997 583 aa8.1□□□□□ -1.11
LSC1YOR142W HGH1P48362 394 aaKnown RBP8.1□□□□□ -1.11
LSC1YOR142W MAP2P38174 421 aaKnown RBP8.09□□□□□ -1.11
LSC1YOR142W PEA2P40091 420 aa8.09□□□□□ -1.11
LSC1YOR142W YFH7P43591 353 aa8.09□□□□□ -1.11
LSC1YOR142W MTC3P53077 123 aa8.09□□□□□ -1.11
LSC1YOR142W INM2Q05533 292 aa8.09□□□□□ -1.11
LSC1YOR142W YJL171CP46992 396 aa8.08□□□□□ -1.12
LSC1YOR142W SEN54Q02825 467 aaPredicted RBP8.08□□□□□ -1.12
LSC1YOR142W RRI2Q12348 645 aa8.08□□□□□ -1.12
LSC1YOR142W CBP1P07252 654 aa8.07□□□□□ -1.12
LSC1YOR142W SNF3P10870 884 aa8.07□□□□□ -1.12
LSC1YOR142W ETP1P38748 585 aaKnown RBP8.07□□□□□ -1.12
LSC1YOR142W ACK1Q07622 623 aaPredicted RBP8.07□□□□□ -1.12
LSC1YOR142W PSF3Q12146 194 aa8.07□□□□□ -1.12
LSC1YOR142W PTK1P36002 662 aaPredicted RBP8.06□□□□□ -1.12
LSC1YOR142W NMD2P38798 1089 aaKnown RBP8.06□□□□□ -1.12
LSC1YOR142W PNT1P38969 423 aa8.05□□□□□ -1.12
LSC1YOR142W YGL242CP53066 181 aa8.05□□□□□ -1.12
LSC1YOR142W PUS6P53294 404 aa8.05□□□□□ -1.12
LSC1YOR142W NSG2P53898 299 aa8.05□□□□□ -1.12
LSC1YOR142W NCB2Q92317 146 aa8.05□□□□□ -1.12
LSC1YOR142W ALO1P54783 526 aaKnown RBP8.04□□□□□ -1.12
LSC1YOR142W CWC15Q03772 175 aaKnown RBP8.04□□□□□ -1.12
LSC1YOR142W NOT3P06102 836 aaKnown RBP8.03□□□□□ -1.12
LSC1YOR142W PIF1P07271 859 aa8.03□□□□□ -1.12
LSC1YOR142W EPS1P40557 701 aa8.03□□□□□ -1.12
LSC1YOR142W BDP1P46678 594 aa8.03□□□□□ -1.12
LSC1YOR142W MDL2P33311 773 aa8.02□□□□□ -1.13
LSC1YOR142W GRX7P38068 203 aa8.02□□□□□ -1.13
LSC1YOR142W APL6P46682 809 aa8.02□□□□□ -1.13
LSC1YOR142W TYW1Q08960 810 aaKnown RBP8.02□□□□□ -1.13
LSC1YOR142W PDR18P53756 1333 aa8.02□□□□□ -1.13
LSC1YOR142W BCH2P36122 765 aa8.01□□□□□ -1.13
LSC1YOR142W ECM21P38167 1117 aaKnown RBP8.01□□□□□ -1.13
LSC1YOR142W NIT1P40447 199 aa8.01□□□□□ -1.13
LSC1YOR142W MLC1P53141 149 aa8.01□□□□□ -1.13
LSC1YOR142W PIB2P53191 635 aa8.01□□□□□ -1.13
LSC1YOR142W CSR2Q12734 1121 aa8.01□□□□□ -1.13
LSC1YOR142W KEL1P38853 1164 aaKnown RBP8□□□□□ -1.13
LSC1YOR142W DUS1P53759 423 aaKnown RBP8□□□□□ -1.13
LSC1YOR142W BOI1P38041 980 aaKnown RBP7.99□□□□□ -1.13
LSC1YOR142W YMR147WP40218 223 aaKnown RBP7.99□□□□□ -1.13
LSC1YOR142W UBP10P53874 792 aaPredicted RBP7.99□□□□□ -1.13
LSC1YOR142W RMD1Q03441 430 aa7.99□□□□□ -1.13
LSC1YOR142W CYB2P00175 591 aa7.98□□□□□ -1.13
LSC1YOR142W CDC16P09798 840 aa7.98□□□□□ -1.13
LSC1YOR142W HVG1P0CE11 249 aa7.98□□□□□ -1.13
LSC1YOR142W RFC1P38630 861 aaKnown RBP7.98□□□□□ -1.13
LSC1YOR142W SCY1P53009 804 aa7.98□□□□□ -1.13
LSC1YOR142W MRPS35P53292 345 aa7.98□□□□□ -1.13
LSC1YOR142W RAD53P22216 821 aa7.97□□□□□ -1.13
LSC1YOR142W ADP1P25371 1049 aa7.97□□□□□ -1.13
LSC1YOR142W PCS60P38137 543 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
LSC1YOR142W RRT6P53117 311 aaPredicted RBP7.97□□□□□ -1.13
LSC1YOR142W PFK2P16862 959 aaKnown RBP RIP-Chip data7.96□□□□□ -1.14not detected
LSC1YOR142W PIP2P52960 996 aa7.96□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 34.3 ms