RNA–Protein interactions for RNA: YOL139C

CDC33, Transcript of mRNA cap binding protein and translation initiation factor eIF4E, yeast

Gene CDC33, Length 642 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC33	YOL139C	MAC1	P35192	417 aa		4.84	□□□□□ -1.63
CDC33	YOL139C	TAT1	P38085	619 aa		4.84	□□□□□ -1.63
CDC33	YOL139C	MSC7	P38694	644 aa		4.84	□□□□□ -1.63
CDC33	YOL139C	KTR7	P40504	517 aa		4.84	□□□□□ -1.63
CDC33	YOL139C	PUF6	Q04373	656 aa	Known RBP	4.84	□□□□□ -1.63
CDC33	YOL139C	RPC31	P17890	251 aa		4.83	□□□□□ -1.64
CDC33	YOL139C	MCA1	Q08601	432 aa		4.83	□□□□□ -1.64
CDC33	YOL139C	SSA4	P22202	642 aa	Known RBP	4.82	□□□□□ -1.64
CDC33	YOL139C	KAP122	P32767	1081 aa		4.82	□□□□□ -1.64
CDC33	YOL139C	NCL1	P38205	684 aa	Known RBP	4.82	□□□□□ -1.64
CDC33	YOL139C	GLT1	Q12680	2145 aa	Known RBP	4.81	□□□□□ -1.64
CDC33	YOL139C	MTO1	P53070	669 aa		4.81	□□□□□ -1.64
CDC33	YOL139C	PUP1	P25043	261 aa		4.8	□□□□□ -1.64
CDC33	YOL139C	IRC24	P40580	263 aa		4.8	□□□□□ -1.64
CDC33	YOL139C	ECM23	Q02710	187 aa		4.8	□□□□□ -1.64
CDC33	YOL139C	CAB1	Q04430	367 aa		4.8	□□□□□ -1.64
CDC33	YOL139C	UBX7	P38349	436 aa		4.79	□□□□□ -1.64
CDC33	YOL139C	APM2	P38700	605 aa		4.79	□□□□□ -1.64
CDC33	YOL139C	CUS1	Q02554	436 aa	Predicted RBP	4.79	□□□□□ -1.64
CDC33	YOL139C	YPL034W	Q03083	165 aa		4.79	□□□□□ -1.64
CDC33	YOL139C	MRPL33	P20084	86 aa		4.78	□□□□□ -1.64
CDC33	YOL139C	CPS1	P27614	576 aa		4.78	□□□□□ -1.64
CDC33	YOL139C	SUV3	P32580	737 aa		4.78	□□□□□ -1.64
CDC33	YOL139C	DYS1	P38791	387 aa		4.78	□□□□□ -1.64
CDC33	YOL139C	YER156C	P40093	338 aa	Known RBP	4.78	□□□□□ -1.64
CDC33	YOL139C	YOR296W	Q08748	1289 aa		4.78	□□□□□ -1.64
CDC33	YOL139C	SRS2	P12954	1174 aa		4.77	□□□□□ -1.65
CDC33	YOL139C	QDR2	P40474	542 aa		4.77	□□□□□ -1.65
CDC33	YOL139C	PRK1	P40494	810 aa		4.76	□□□□□ -1.65
CDC33	YOL139C	ALD4	P46367	519 aa	Known RBP	4.76	□□□□□ -1.65
CDC33	YOL139C	SLP1	Q12232	587 aa		4.76	□□□□□ -1.65
CDC33	YOL139C	NHA1	Q99271	985 aa		4.76	□□□□□ -1.65
CDC33	YOL139C	VMA3	P25515	160 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	LDH1	P38139	375 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	YBR197C	P38306	217 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	YBR287W	P38355	427 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	TPS3	P38426	1054 aa	Known RBP	4.75	□□□□□ -1.65
CDC33	YOL139C	PRY1	P47032	299 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	CWC15	Q03772	175 aa	Known RBP	4.75	□□□□□ -1.65
CDC33	YOL139C	RLF2	Q12495	606 aa		4.75	□□□□□ -1.65
CDC33	YOL139C	GIP1	P38229	639 aa		4.74	□□□□□ -1.65
CDC33	YOL139C	INP52	P50942	1183 aa		4.74	□□□□□ -1.65
CDC33	YOL139C	ALO1	P54783	526 aa	Known RBP	4.74	□□□□□ -1.65
CDC33	YOL139C	GIS4	Q04233	774 aa		4.74	□□□□□ -1.65
CDC33	YOL139C	RSC2	Q06488	889 aa		4.74	□□□□□ -1.65
CDC33	YOL139C	IDI1	P15496	288 aa		4.73	□□□□□ -1.65
CDC33	YOL139C	OMA1	P36163	345 aa		4.73	□□□□□ -1.65
CDC33	YOL139C	ISW1	P38144	1129 aa		4.73	□□□□□ -1.65
CDC33	YOL139C	ALG14	P38242	237 aa		4.72	□□□□□ -1.65
CDC33	YOL139C	ITC1	P53125	1264 aa		4.72	□□□□□ -1.65
CDC33	YOL139C	YNR040W	P53736	256 aa		4.72	□□□□□ -1.65
CDC33	YOL139C	FOX2	Q02207	900 aa	Known RBP	4.72	□□□□□ -1.65
CDC33	YOL139C	PUN1	Q06991	263 aa		4.72	□□□□□ -1.65
CDC33	YOL139C	NAR1	P23503	491 aa	Known RBP	4.71	□□□□□ -1.66
CDC33	YOL139C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
CDC33	YOL139C	ISC10	P32645	267 aa		4.71	□□□□□ -1.66
CDC33	YOL139C	PGM2	P37012	569 aa	Known RBP	4.71	□□□□□ -1.66
CDC33	YOL139C	NOB1	Q08444	459 aa	Known RBP	4.71	□□□□□ -1.66
CDC33	YOL139C	SFA1	P32771	386 aa		4.7	□□□□□ -1.66
CDC33	YOL139C	RRN6	P32786	894 aa		4.7	□□□□□ -1.66
CDC33	YOL139C	APC11	Q12157	165 aa		4.7	□□□□□ -1.66
CDC33	YOL139C	AI3	P03877	415 aa		4.69	□□□□□ -1.66
CDC33	YOL139C	BSD2	P38356	321 aa		4.68	□□□□□ -1.66
CDC33	YOL139C	YIL165C	P40446	119 aa		4.68	□□□□□ -1.66
CDC33	YOL139C	BUD9	P53226	547 aa		4.68	□□□□□ -1.66
CDC33	YOL139C	PNP1	Q05788	311 aa		4.68	□□□□□ -1.66
CDC33	YOL139C	LSO1	Q3E827	93 aa		4.68	□□□□□ -1.66
CDC33	YOL139C	MSN1	P22148	382 aa		4.67	□□□□□ -1.66
CDC33	YOL139C	FIR1	P40020	876 aa		4.67	□□□□□ -1.66
CDC33	YOL139C	HXT8	P40886	569 aa		4.67	□□□□□ -1.66
CDC33	YOL139C	LEM3	P42838	414 aa		4.67	□□□□□ -1.66
CDC33	YOL139C	YML083C	Q04526	418 aa		4.67	□□□□□ -1.66
CDC33	YOL139C	SUB2	Q07478	446 aa	Known RBP	4.67	□□□□□ -1.66
CDC33	YOL139C	NTA1	P40354	457 aa		4.66	□□□□□ -1.66
CDC33	YOL139C	SMC1	P32908	1225 aa		4.65	□□□□□ -1.67
CDC33	YOL139C	PGM1	P33401	570 aa	Known RBP	4.65	□□□□□ -1.67
CDC33	YOL139C	ARI1	P53111	347 aa	Known RBP	4.65	□□□□□ -1.67
CDC33	YOL139C	GUP1	P53154	560 aa		4.65	□□□□□ -1.67
CDC33	YOL139C	SAC7	P17121	654 aa		4.64	□□□□□ -1.67
CDC33	YOL139C	KTR2	P33550	425 aa		4.64	□□□□□ -1.67
CDC33	YOL139C	RRM3	P38766	723 aa		4.64	□□□□□ -1.67
CDC33	YOL139C	PPT1	P53043	513 aa		4.64	□□□□□ -1.67
CDC33	YOL139C	SOG2	Q08817	791 aa		4.64	□□□□□ -1.67
CDC33	YOL139C	TY4B-P	A0A0B7P3V8	1104 aa		4.63	□□□□□ -1.67
CDC33	YOL139C	FUR4	P05316	633 aa	Known RBP	4.63	□□□□□ -1.67
CDC33	YOL139C	AIM46	P38885	310 aa		4.63	□□□□□ -1.67
CDC33	YOL139C	AVT1	P47082	602 aa		4.63	□□□□□ -1.67
CDC33	YOL139C	DSE4	P53753	1117 aa		4.63	□□□□□ -1.67
CDC33	YOL139C	EMG1	Q06287	252 aa	Known RBP	4.63	□□□□□ -1.67
CDC33	YOL139C	TY4A-H	Q6Q5P6	413 aa		4.63	□□□□□ -1.67
CDC33	YOL139C	MRP10	O75012	95 aa		4.62	□□□□□ -1.67
CDC33	YOL139C	FUS1	P11710	512 aa		4.62	□□□□□ -1.67
CDC33	YOL139C	GIP2	P40036	548 aa		4.62	□□□□□ -1.67
CDC33	YOL139C	INP51	P40559	946 aa	Known RBP	4.62	□□□□□ -1.67
CDC33	YOL139C	RGD2	P43556	714 aa		4.62	□□□□□ -1.67
CDC33	YOL139C	BIO5	P53744	561 aa	Known RBP	4.62	□□□□□ -1.67
CDC33	YOL139C	RSC6	P25632	483 aa		4.61	□□□□□ -1.67
CDC33	YOL139C	IRS4	P36115	615 aa	Known RBP	4.61	□□□□□ -1.67
CDC33	YOL139C	BOI1	P38041	980 aa	Known RBP	4.6	□□□□□ -1.67
CDC33	YOL139C	RAD55	P38953	406 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms