RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W NSE3Q05541 303 aa5.11□□□□□ -1.59
VPS27YNR006W PIN2Q12057 282 aa5.11□□□□□ -1.59
VPS27YNR006W ISC10P32645 267 aa5.1□□□□□ -1.59
VPS27YNR006W HXT5P38695 592 aa5.1□□□□□ -1.59
VPS27YNR006W RTT106P40161 455 aa5.1□□□□□ -1.59
VPS27YNR006W SUM1P46676 1062 aa5.1□□□□□ -1.59
VPS27YNR006W RPN4Q03465 531 aa5.1□□□□□ -1.59
VPS27YNR006W CDC4P07834 779 aa5.09□□□□□ -1.59
VPS27YNR006W MCM1P11746 286 aa5.09□□□□□ -1.59
VPS27YNR006W YRB30P53107 440 aaPredicted RBP5.09□□□□□ -1.59
VPS27YNR006W SUB1P54000 292 aaKnown RBP5.09□□□□□ -1.59
VPS27YNR006W FOX2Q02207 900 aaKnown RBP5.09□□□□□ -1.59
VPS27YNR006W DLD3P39976 496 aaKnown RBP5.09□□□□□ -1.6
VPS27YNR006W APC11Q12157 165 aa5.09□□□□□ -1.6
VPS27YNR006W PHO4P07270 312 aaKnown RBP5.08□□□□□ -1.6
VPS27YNR006W OSW7P43611 510 aa5.08□□□□□ -1.6
VPS27YNR006W JSN1P47135 1091 aaKnown RBP RIP-Chip data5.08□□□□□ -1.6not detected
VPS27YNR006W MSB3P48566 633 aaPredicted RBP5.08□□□□□ -1.6
VPS27YNR006W TPO2P53283 614 aa5.08□□□□□ -1.6
VPS27YNR006W AFT1P22149 690 aa5.07□□□□□ -1.6
VPS27YNR006W PBP2P38151 413 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
VPS27YNR006W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.07□□□□□ -1.6not detected
VPS27YNR006W UGA3P26370 528 aa5.07□□□□□ -1.6
VPS27YNR006W KTR2P33550 425 aa5.07□□□□□ -1.6
VPS27YNR006W ASH1P34233 588 aa5.07□□□□□ -1.6
VPS27YNR006W MAD1P40957 749 aa5.07□□□□□ -1.6
VPS27YNR006W YJL049WP47048 450 aa5.07□□□□□ -1.6
VPS27YNR006W SRC1Q03707 834 aa5.07□□□□□ -1.6
VPS27YNR006W MRPL33P20084 86 aa5.06□□□□□ -1.6
VPS27YNR006W RPB10P22139 70 aa5.06□□□□□ -1.6
VPS27YNR006W GRX4P32642 244 aa5.06□□□□□ -1.6
VPS27YNR006W RPT1P33299 467 aaKnown RBP5.06□□□□□ -1.6
VPS27YNR006W SSN3P39073 555 aa5.06□□□□□ -1.6
VPS27YNR006W VPS72Q03388 795 aa5.06□□□□□ -1.6
VPS27YNR006W TRS120Q04183 1289 aa5.06□□□□□ -1.6
VPS27YNR006W BUD21Q08492 214 aaPredicted RBP5.06□□□□□ -1.6
VPS27YNR006W SSB1P11484 613 aaKnown RBP5.05□□□□□ -1.6
VPS27YNR006W STI1P15705 589 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
VPS27YNR006W SCD5P34758 872 aa5.05□□□□□ -1.6
VPS27YNR006W TAT2P38967 592 aa5.05□□□□□ -1.6
VPS27YNR006W SSB2P40150 613 aaKnown RBP5.05□□□□□ -1.6
VPS27YNR006W SPR3P41901 512 aa5.05□□□□□ -1.6
VPS27YNR006W AAD14P42884 376 aa5.05□□□□□ -1.6
VPS27YNR006W MTO1P53070 669 aa5.05□□□□□ -1.6
VPS27YNR006W YNL165WP53891 406 aa5.05□□□□□ -1.6
VPS27YNR006W RMD1Q03441 430 aa5.05□□□□□ -1.6
VPS27YNR006W BDF2Q07442 638 aa5.05□□□□□ -1.6
VPS27YNR006W DAK2P43550 591 aa5.05□□□□□ -1.6
VPS27YNR006W HST3P53687 447 aa5.05□□□□□ -1.6
VPS27YNR006W ARG82P07250 355 aa5.04□□□□□ -1.6
VPS27YNR006W POB3Q04636 552 aaKnown RBP5.04□□□□□ -1.6
VPS27YNR006W CDC53Q12018 815 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W WRS1Q12109 432 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W Q0182Q9ZZW1 134 aa5.03□□□□□ -1.6
VPS27YNR006W CLN2P20438 545 aa5.03□□□□□ -1.6
VPS27YNR006W VMA3P25515 160 aa5.03□□□□□ -1.6
VPS27YNR006W SHM1P37292 490 aaPredicted RBP5.03□□□□□ -1.6
VPS27YNR006W RPS26AP39938 119 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W RPS26BP39939 119 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W ALA1P40825 983 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W YJR142WP47173 342 aa5.03□□□□□ -1.6
VPS27YNR006W MSN5P52918 1224 aa5.03□□□□□ -1.6
VPS27YNR006W ESF1Q06344 628 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W UTP4Q06679 776 aaKnown RBP5.03□□□□□ -1.6
VPS27YNR006W RPS31P05759 152 aaKnown RBP5.02□□□□□ -1.61
VPS27YNR006W MLF3P32047 452 aa5.02□□□□□ -1.61
VPS27YNR006W PMC1P38929 1173 aaPredicted RBP5.02□□□□□ -1.61
VPS27YNR006W JJJ2P46997 583 aa5.02□□□□□ -1.61
VPS27YNR006W PTK2P47116 818 aaKnown RBP5.02□□□□□ -1.61
VPS27YNR006W SUT1P53032 299 aaKnown RBP5.02□□□□□ -1.61
VPS27YNR006W UFD2P54860 961 aa5.02□□□□□ -1.61
VPS27YNR006W PPM2Q08282 695 aa5.02□□□□□ -1.61
VPS27YNR006W MNN1P39106 762 aa5.01□□□□□ -1.61
VPS27YNR006W TPM2P40414 161 aa5.01□□□□□ -1.61
VPS27YNR006W YJR115WP47152 169 aa5.01□□□□□ -1.61
VPS27YNR006W TOS4Q06266 489 aa5.01□□□□□ -1.61
VPS27YNR006W DLD1P32891 587 aa5□□□□□ -1.61
VPS27YNR006W YOL057WQ08225 711 aa5□□□□□ -1.61
VPS27YNR006W TY1A-DR3Q12441 440 aa5□□□□□ -1.61
VPS27YNR006W CYC8P14922 966 aa5□□□□□ -1.61
VPS27YNR006W PEP7P32609 515 aa5□□□□□ -1.61
VPS27YNR006W SLA1P32790 1244 aa5□□□□□ -1.61
VPS27YNR006W DAL1P32375 460 aa4.99□□□□□ -1.61
VPS27YNR006W UBP12P39538 1254 aa4.99□□□□□ -1.61
VPS27YNR006W HXT8P40886 569 aa4.99□□□□□ -1.61
VPS27YNR006W HUL5P53119 910 aa4.99□□□□□ -1.61
VPS27YNR006W TRK1P12685 1235 aa4.98□□□□□ -1.61
VPS27YNR006W GRX1P25373 110 aaKnown RBP4.98□□□□□ -1.61
VPS27YNR006W IRE1P32361 1115 aa4.98□□□□□ -1.61
VPS27YNR006W MNR2P35724 969 aa4.98□□□□□ -1.61
VPS27YNR006W LDH1P38139 375 aa4.98□□□□□ -1.61
VPS27YNR006W QDR2P40474 542 aa4.98□□□□□ -1.61
VPS27YNR006W YGL081WP53156 320 aa4.98□□□□□ -1.61
VPS27YNR006W YGR122WP53272 402 aa4.98□□□□□ -1.61
VPS27YNR006W YOR131CQ12486 218 aa4.98□□□□□ -1.61
VPS27YNR006W SRF1Q12516 437 aa4.98□□□□□ -1.61
VPS27YNR006W YGR161W-CQ3E744 92 aa4.98□□□□□ -1.61
VPS27YNR006W NUP82P40368 713 aa4.98□□□□□ -1.61
VPS27YNR006W NUP85P46673 744 aa4.98□□□□□ -1.61
VPS27YNR006W VTC4P47075 721 aa4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 65.9 ms