RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C SEC2P17065 759 aa2.54□□□□□ -2
SFB2YNL049C NAP1P25293 417 aaKnown RBP2.54□□□□□ -2
SFB2YNL049C TYS1P36421 394 aaKnown RBP2.54□□□□□ -2
SFB2YNL049C KTR7P40504 517 aa2.54□□□□□ -2
SFB2YNL049C TUB4P53378 473 aa2.54□□□□□ -2
SFB2YNL049C TBF1Q02457 562 aa2.54□□□□□ -2
SFB2YNL049C YDL206WQ12424 762 aa2.54□□□□□ -2
SFB2YNL049C NPL4P33755 580 aa2.54□□□□□ -2
SFB2YNL049C YIL177CP40434 1758 aa2.53□□□□□ -2
SFB2YNL049C YJL225CP40889 1758 aa2.53□□□□□ -2
SFB2YNL049C SSF1P38789 453 aaPredicted RBP2.53□□□□□ -2
SFB2YNL049C EMP47P43555 445 aa2.53□□□□□ -2
SFB2YNL049C YPP1P46951 817 aa2.53□□□□□ -2
SFB2YNL049C PRP43P53131 767 aaKnown RBP2.53□□□□□ -2
SFB2YNL049C ECM23Q02710 187 aa2.53□□□□□ -2
SFB2YNL049C UTP10P42945 1769 aaKnown RBP2.53□□□□□ -2.01
SFB2YNL049C GCD11P32481 527 aaKnown RBP2.53□□□□□ -2.01
SFB2YNL049C AIR1P40507 360 aaKnown RBP2.53□□□□□ -2.01
SFB2YNL049C APP1P53933 587 aa2.53□□□□□ -2.01
SFB2YNL049C BUD20Q08004 166 aaPredicted RBP2.53□□□□□ -2.01
SFB2YNL049C HAT1Q12341 374 aa2.53□□□□□ -2.01
SFB2YNL049C RPA14P50106 137 aa2.52□□□□□ -2.01
SFB2YNL049C SIR4P11978 1358 aa2.52□□□□□ -2.01
SFB2YNL049C PAC1P39946 494 aaKnown RBP2.52□□□□□ -2.01
SFB2YNL049C RRD1P40454 393 aaKnown RBP2.52□□□□□ -2.01
SFB2YNL049C FIG4P42837 879 aa2.52□□□□□ -2.01
SFB2YNL049C SEN54Q02825 467 aaPredicted RBP2.52□□□□□ -2.01
SFB2YNL049C SAS4Q04003 481 aa2.52□□□□□ -2.01
SFB2YNL049C PUS5Q06244 254 aa2.52□□□□□ -2.01
SFB2YNL049C YPR084WQ06821 456 aa2.52□□□□□ -2.01
SFB2YNL049C TEC1P18412 486 aa2.51□□□□□ -2.01
SFB2YNL049C PRP40P33203 583 aaKnown RBP2.51□□□□□ -2.01
SFB2YNL049C YPR097WQ06839 1073 aa2.51□□□□□ -2.01
SFB2YNL049C KRE5P22023 1365 aa2.51□□□□□ -2.01
SFB2YNL049C FIG2P25653 1609 aa2.51□□□□□ -2.01
SFB2YNL049C PDC1P06169 563 aaKnown RBP2.51□□□□□ -2.01
SFB2YNL049C GAL2P13181 574 aa2.51□□□□□ -2.01
SFB2YNL049C MET22P32179 357 aa2.51□□□□□ -2.01
SFB2YNL049C SLD2P34252 453 aa2.51□□□□□ -2.01
SFB2YNL049C UBX7P38349 436 aa2.51□□□□□ -2.01
SFB2YNL049C ALD3P54114 506 aa2.51□□□□□ -2.01
SFB2YNL049C MHP1P43638 1398 aa2.5□□□□□ -2.01
SFB2YNL049C TPS3P38426 1054 aaKnown RBP2.5□□□□□ -2.01
SFB2YNL049C ALD4P46367 519 aaKnown RBP2.5□□□□□ -2.01
SFB2YNL049C UTP22P53254 1237 aaPredicted RBP2.5□□□□□ -2.01
SFB2YNL049C MTC5Q03897 1148 aa2.5□□□□□ -2.01
SFB2YNL049C FRA1Q07825 749 aa2.5□□□□□ -2.01
SFB2YNL049C GUT2P32191 649 aa2.5□□□□□ -2.01
SFB2YNL049C APL6P46682 809 aa2.5□□□□□ -2.01
SFB2YNL049C RIA1P53893 1110 aa2.5□□□□□ -2.01
SFB2YNL049C STE20Q03497 939 aaKnown RBP2.5□□□□□ -2.01
SFB2YNL049C ALR1Q08269 859 aa2.5□□□□□ -2.01
SFB2YNL049C IKI3Q06706 1349 aaKnown RBP2.5□□□□□ -2.01
SFB2YNL049C SOH1P38633 127 aa2.49□□□□□ -2.01
SFB2YNL049C RRN7P40992 514 aa2.49□□□□□ -2.01
SFB2YNL049C CLA4P48562 842 aa2.49□□□□□ -2.01
SFB2YNL049C PRT1P06103 763 aaKnown RBP2.49□□□□□ -2.01
SFB2YNL049C ACS2P52910 683 aaKnown RBP2.49□□□□□ -2.01
SFB2YNL049C YBL113CQ7M4S9 792 aa2.49□□□□□ -2.01
SFB2YNL049C PHO87P25360 923 aa2.48□□□□□ -2.01
SFB2YNL049C MRF1P30775 413 aaPredicted RBP2.48□□□□□ -2.01
SFB2YNL049C ERP5P38819 212 aa2.48□□□□□ -2.01
SFB2YNL049C HXT10P43581 546 aa2.48□□□□□ -2.01
SFB2YNL049C CTH1P47976 325 aa2.48□□□□□ -2.01
SFB2YNL049C CWC15Q03772 175 aaKnown RBP2.48□□□□□ -2.01
SFB2YNL049C SRF1Q12516 437 aa2.48□□□□□ -2.01
SFB2YNL049C NPR2P39923 615 aa2.48□□□□□ -2.01
SFB2YNL049C ROM1P53046 1155 aa2.48□□□□□ -2.01
SFB2YNL049C KXD1P53158 218 aa2.48□□□□□ -2.01
SFB2YNL049C CTT1P06115 562 aa2.47□□□□□ -2.01
SFB2YNL049C VAC17P25591 423 aa2.47□□□□□ -2.01
SFB2YNL049C HEM3P28789 327 aa2.47□□□□□ -2.01
SFB2YNL049C HAL5P38970 855 aaKnown RBP2.47□□□□□ -2.01
SFB2YNL049C RAD4P14736 754 aa2.47□□□□□ -2.01
SFB2YNL049C RRN6P32786 894 aa2.47□□□□□ -2.01
SFB2YNL049C IXR1P33417 597 aa2.47□□□□□ -2.01
SFB2YNL049C ATG3P40344 310 aa2.47□□□□□ -2.01
SFB2YNL049C KAR5Q04746 504 aa2.47□□□□□ -2.01
SFB2YNL049C UTP13Q05946 817 aaKnown RBP2.47□□□□□ -2.01
SFB2YNL049C MOD5P07884 428 aa2.46□□□□□ -2.02
SFB2YNL049C TRL1P09880 827 aaKnown RBP2.46□□□□□ -2.02
SFB2YNL049C HAP4P14064 554 aa2.46□□□□□ -2.02
SFB2YNL049C PDI1P17967 522 aaKnown RBP2.46□□□□□ -2.02
SFB2YNL049C BOL3P39724 118 aa2.46□□□□□ -2.02
SFB2YNL049C YJL181WP46987 611 aa2.46□□□□□ -2.02
SFB2YNL049C FOX2Q02207 900 aaKnown RBP2.46□□□□□ -2.02
SFB2YNL049C PRP5P21372 849 aaPredicted RBP2.46□□□□□ -2.02
SFB2YNL049C TPD3P31383 635 aa2.46□□□□□ -2.02
SFB2YNL049C DOT5P40553 215 aa2.46□□□□□ -2.02
SFB2YNL049C MDJ2P42834 146 aa2.46□□□□□ -2.02
SFB2YNL049C MEC3Q02574 474 aa2.46□□□□□ -2.02
SFB2YNL049C YDR444WQ04093 687 aa2.46□□□□□ -2.02
SFB2YNL049C PUF6Q04373 656 aaKnown RBP2.46□□□□□ -2.02
SFB2YNL049C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
SFB2YNL049C TSC13Q99190 310 aa2.46□□□□□ -2.02
SFB2YNL049C PAT1P25644 796 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C SPT16P32558 1035 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C GRS1P38088 690 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C STM1P39015 273 aaKnown RBP2.45□□□□□ -2.02
SFB2YNL049C PNP1Q05788 311 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms