RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W ATG32P40458 529 aa5.73□□□□□ -1.49
DDR48YMR173W GAS5Q08193 484 aa5.73□□□□□ -1.49
DDR48YMR173W TIF1P10081 395 aaKnown RBP5.72□□□□□ -1.49
DDR48YMR173W RTG2P32608 588 aaKnown RBP5.72□□□□□ -1.49
DDR48YMR173W KAP122P32767 1081 aa5.72□□□□□ -1.49
DDR48YMR173W YNR040WP53736 256 aa5.72□□□□□ -1.49
DDR48YMR173W SAC7P17121 654 aa5.71□□□□□ -1.5
DDR48YMR173W HXT5P38695 592 aa5.71□□□□□ -1.5
DDR48YMR173W APM2P38700 605 aa5.71□□□□□ -1.5
DDR48YMR173W RRM3P38766 723 aa5.71□□□□□ -1.5
DDR48YMR173W IRC24P40580 263 aa5.71□□□□□ -1.5
DDR48YMR173W ACS2P52910 683 aaKnown RBP5.71□□□□□ -1.5
DDR48YMR173W UBP1P25037 809 aa5.7□□□□□ -1.5
DDR48YMR173W SCD5P34758 872 aa5.7□□□□□ -1.5
DDR48YMR173W RPC31P17890 251 aa5.69□□□□□ -1.5
DDR48YMR173W LEO1P38439 464 aa5.69□□□□□ -1.5
DDR48YMR173W ARI1P53111 347 aaKnown RBP5.69□□□□□ -1.5
DDR48YMR173W MRP10O75012 95 aa5.68□□□□□ -1.5
DDR48YMR173W PHO87P25360 923 aa5.68□□□□□ -1.5
DDR48YMR173W SFA1P32771 386 aa5.68□□□□□ -1.5
DDR48YMR173W NGR1P32831 672 aaKnown RBP5.67□□□□□ -1.5
DDR48YMR173W KTR7P40504 517 aa5.67□□□□□ -1.5
DDR48YMR173W HGH1P48362 394 aaKnown RBP5.67□□□□□ -1.5
DDR48YMR173W NAB2P32505 525 aaKnown RBP RIP-Chip data5.66□□□□□ -1.5not detected
DDR48YMR173W RPL34BP40525 121 aaKnown RBP5.66□□□□□ -1.5
DDR48YMR173W GAS4Q08271 471 aa5.66□□□□□ -1.5
DDR48YMR173W HAP4P14064 554 aa5.65□□□□□ -1.5
DDR48YMR173W IDI1P15496 288 aa5.65□□□□□ -1.5
DDR48YMR173W TRP3P00937 484 aa5.64□□□□□ -1.51
DDR48YMR173W QDR2P40474 542 aa5.64□□□□□ -1.51
DDR48YMR173W COQ2P32378 372 aa5.63□□□□□ -1.51
DDR48YMR173W YKR073CP36153 106 aa5.63□□□□□ -1.51
DDR48YMR173W MED7Q08278 222 aa5.63□□□□□ -1.51
DDR48YMR173W SLP1Q12232 587 aa5.63□□□□□ -1.51
DDR48YMR173W KAE1P36132 386 aa5.62□□□□□ -1.51
DDR48YMR173W AVT1P47082 602 aa5.62□□□□□ -1.51
DDR48YMR173W ROM1P53046 1155 aa5.62□□□□□ -1.51
DDR48YMR173W ITC1P53125 1264 aa5.62□□□□□ -1.51
DDR48YMR173W YLR122CQ12312 125 aa5.62□□□□□ -1.51
DDR48YMR173W YER156CP40093 338 aaKnown RBP5.61□□□□□ -1.51
DDR48YMR173W TY4B-PA0A0B7P3V8 1104 aa5.59□□□□□ -1.51
DDR48YMR173W RSC6P25632 483 aa5.59□□□□□ -1.51
DDR48YMR173W TY4A-HQ6Q5P6 413 aa5.59□□□□□ -1.51
DDR48YMR173W GAL2P13181 574 aa5.58□□□□□ -1.52
DDR48YMR173W TED1P40533 473 aa5.58□□□□□ -1.52
DDR48YMR173W TY1A-NL1Q12391 440 aaKnown RBP5.58□□□□□ -1.52
DDR48YMR173W LIP5P32875 414 aa5.57□□□□□ -1.52
DDR48YMR173W TOS1P38288 455 aa5.57□□□□□ -1.52
DDR48YMR173W SAF1P38352 637 aa5.57□□□□□ -1.52
DDR48YMR173W GIP2P40036 548 aa5.57□□□□□ -1.52
DDR48YMR173W CTH1P47976 325 aa5.57□□□□□ -1.52
DDR48YMR173W CAB1Q04430 367 aa5.57□□□□□ -1.52
DDR48YMR173W YOR296WQ08748 1289 aa5.57□□□□□ -1.52
DDR48YMR173W VAN1P23642 535 aa5.56□□□□□ -1.52
DDR48YMR173W PUB1P32588 453 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
DDR48YMR173W VMA3P25515 160 aa5.55□□□□□ -1.52
DDR48YMR173W SUV3P32580 737 aa5.55□□□□□ -1.52
DDR48YMR173W SIS2P36024 562 aa5.55□□□□□ -1.52
DDR48YMR173W SOK2P53438 785 aaPredicted RBP5.55□□□□□ -1.52
DDR48YMR173W MRPL33P20084 86 aa5.54□□□□□ -1.52
DDR48YMR173W BSD2P38356 321 aa5.54□□□□□ -1.52
DDR48YMR173W CWH41P53008 833 aa5.54□□□□□ -1.52
DDR48YMR173W YGR130CP53278 816 aa5.54□□□□□ -1.52
DDR48YMR173W CHS2P14180 963 aa5.53□□□□□ -1.52
DDR48YMR173W AOS1Q06624 347 aa5.53□□□□□ -1.52
DDR48YMR173W BRE4Q07660 1125 aa5.53□□□□□ -1.52
DDR48YMR173W NAM7P30771 971 aaKnown RBP5.52□□□□□ -1.53
DDR48YMR173W GIP1P38229 639 aa5.52□□□□□ -1.53
DDR48YMR173W DYS1P38791 387 aa5.52□□□□□ -1.53
DDR48YMR173W AKR1P39010 764 aa5.52□□□□□ -1.53
DDR48YMR173W DSE4P53753 1117 aa5.52□□□□□ -1.53
DDR48YMR173W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53not detected
DDR48YMR173W TRS33Q99394 268 aa5.52□□□□□ -1.53
DDR48YMR173W REC8Q12188 680 aa5.51□□□□□ -1.53
DDR48YMR173W ELM1P32801 640 aa5.5□□□□□ -1.53
DDR48YMR173W YJL181WP46987 611 aa5.5□□□□□ -1.53
DDR48YMR173W FOX2Q02207 900 aaKnown RBP5.5□□□□□ -1.53
DDR48YMR173W MAG2Q06436 670 aaKnown RBP5.5□□□□□ -1.53
DDR48YMR173W RSC2Q06488 889 aa5.5□□□□□ -1.53
DDR48YMR173W LDH1P38139 375 aa5.49□□□□□ -1.53
DDR48YMR173W YBR197CP38306 217 aa5.49□□□□□ -1.53
DDR48YMR173W PPT1P53043 513 aa5.49□□□□□ -1.53
DDR48YMR173W CYC7P00045 113 aa5.48□□□□□ -1.53
DDR48YMR173W TGL4P36165 910 aa5.48□□□□□ -1.53
DDR48YMR173W ISW1P38144 1129 aa5.48□□□□□ -1.53
DDR48YMR173W YIL165CP40446 119 aa5.48□□□□□ -1.53
DDR48YMR173W SPO74P45819 413 aa5.48□□□□□ -1.53
DDR48YMR173W ECM23Q02710 187 aa5.47□□□□□ -1.53
DDR48YMR173W PAN5P38787 379 aa5.46□□□□□ -1.54
DDR48YMR173W INP51P40559 946 aaKnown RBP5.46□□□□□ -1.54
DDR48YMR173W MSN1P22148 382 aa5.45□□□□□ -1.54
DDR48YMR173W TTI1P36097 1038 aa5.44□□□□□ -1.54
DDR48YMR173W ISC10P32645 267 aa5.43□□□□□ -1.54
DDR48YMR173W UBX7P38349 436 aa5.43□□□□□ -1.54
DDR48YMR173W GUP1P53154 560 aa5.43□□□□□ -1.54
DDR48YMR173W BIO5P53744 561 aaKnown RBP5.43□□□□□ -1.54
DDR48YMR173W TFA2P36145 328 aa5.42□□□□□ -1.54
DDR48YMR173W LEM3P42838 414 aa5.42□□□□□ -1.54
DDR48YMR173W ALD4P46367 519 aaKnown RBP5.42□□□□□ -1.54
DDR48YMR173W EMG1Q06287 252 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms