RNA–Protein interactions for RNA: YMR159C

ATG16, Transcript of Conserved protein involved in autophagy, yeastyeast

Gene ATG16, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG16YMR159C YMR265CQ03508 461 aaKnown RBP7.04□□□□□ -1.28
ATG16YMR159C YDR461C-AQ2V2P7 80 aa7.04□□□□□ -1.28
ATG16YMR159C GLO3P38682 493 aaKnown RBP7.03□□□□□ -1.28
ATG16YMR159C QDR1P40475 563 aa7.03□□□□□ -1.28
ATG16YMR159C SPR3P41901 512 aa7.03□□□□□ -1.28
ATG16YMR159C STB3Q12427 513 aa7.02□□□□□ -1.29
ATG16YMR159C KTR2P33550 425 aa7.01□□□□□ -1.29
ATG16YMR159C HXT8P40886 569 aa7.01□□□□□ -1.29
ATG16YMR159C MDJ2P42834 146 aa7.01□□□□□ -1.29
ATG16YMR159C CUS1Q02554 436 aaPredicted RBP7.01□□□□□ -1.29
ATG16YMR159C NOP8Q08287 484 aaPredicted RBP7.01□□□□□ -1.29
ATG16YMR159C YBR287WP38355 427 aa7□□□□□ -1.29
ATG16YMR159C CEM1P39525 442 aa7□□□□□ -1.29
ATG16YMR159C LYS5P50113 272 aa7□□□□□ -1.29
ATG16YMR159C KRE33P53914 1056 aaKnown RBP7□□□□□ -1.29
ATG16YMR159C YML020WQ03722 664 aa7□□□□□ -1.29
ATG16YMR159C YOR296WQ08748 1289 aa7□□□□□ -1.29
ATG16YMR159C RPB10P22139 70 aa6.99□□□□□ -1.29
ATG16YMR159C SMC1P32908 1225 aa6.99□□□□□ -1.29
ATG16YMR159C ISW1P38144 1129 aa6.99□□□□□ -1.29
ATG16YMR159C GIP1P38229 639 aa6.99□□□□□ -1.29
ATG16YMR159C STM1P39015 273 aaKnown RBP6.99□□□□□ -1.29
ATG16YMR159C SYT1Q06836 1226 aa6.99□□□□□ -1.29
ATG16YMR159C MSN1P22148 382 aa6.98□□□□□ -1.29
ATG16YMR159C GRS1P38088 690 aaKnown RBP6.98□□□□□ -1.29
ATG16YMR159C APM2P38700 605 aa6.98□□□□□ -1.29
ATG16YMR159C SUT1P53032 299 aaKnown RBP6.98□□□□□ -1.29
ATG16YMR159C UFD2P54860 961 aa6.98□□□□□ -1.29
ATG16YMR159C ADE12P80210 433 aaKnown RBP6.98□□□□□ -1.29
ATG16YMR159C HEH2Q03281 663 aa6.98□□□□□ -1.29
ATG16YMR159C FPS1P23900 669 aa6.97□□□□□ -1.29
ATG16YMR159C SLD2P34252 453 aa6.97□□□□□ -1.29
ATG16YMR159C NCL1P38205 684 aaKnown RBP6.97□□□□□ -1.29
ATG16YMR159C FIR1P40020 876 aa6.97□□□□□ -1.29
ATG16YMR159C DPH6Q12429 685 aa6.97□□□□□ -1.29
ATG16YMR159C NTA1P40354 457 aa6.96□□□□□ -1.3
ATG16YMR159C YPL062WQ02781 134 aa6.96□□□□□ -1.3
ATG16YMR159C TRS120Q04183 1289 aa6.96□□□□□ -1.3
ATG16YMR159C NAB2P32505 525 aaKnown RBP RIP-Chip data6.95□□□□□ -1.3not detected
ATG16YMR159C BSD2P38356 321 aa6.95□□□□□ -1.3
ATG16YMR159C JJJ3P47138 172 aa6.95□□□□□ -1.3
ATG16YMR159C HPF1Q05164 967 aa6.95□□□□□ -1.3
ATG16YMR159C MSC7P38694 644 aa6.94□□□□□ -1.3
ATG16YMR159C RGD2P43556 714 aa6.94□□□□□ -1.3
ATG16YMR159C ITC1P53125 1264 aa6.94□□□□□ -1.3
ATG16YMR159C YGR035CP53222 116 aa6.94□□□□□ -1.3
ATG16YMR159C YNR040WP53736 256 aa6.94□□□□□ -1.3
ATG16YMR159C RAD55P38953 406 aa6.93□□□□□ -1.3
ATG16YMR159C YER156CP40093 338 aaKnown RBP6.93□□□□□ -1.3
ATG16YMR159C SEN54Q02825 467 aaPredicted RBP6.93□□□□□ -1.3
ATG16YMR159C TY1A-DR2Q03964 440 aaKnown RBP6.93□□□□□ -1.3
ATG16YMR159C NUT2Q06213 157 aa6.93□□□□□ -1.3
ATG16YMR159C MSC6Q08818 692 aaKnown RBP6.93□□□□□ -1.3
ATG16YMR159C SEC20P28791 383 aa6.92□□□□□ -1.3
ATG16YMR159C PPX1P38698 397 aa6.92□□□□□ -1.3
ATG16YMR159C YHL050CP38721 697 aa6.92□□□□□ -1.3
ATG16YMR159C YHR219WP38900 624 aa6.92□□□□□ -1.3
ATG16YMR159C IRS4P36115 615 aaKnown RBP6.91□□□□□ -1.3
ATG16YMR159C YIL165CP40446 119 aa6.91□□□□□ -1.3
ATG16YMR159C RSC4Q02206 625 aa6.91□□□□□ -1.3
ATG16YMR159C MNL2Q12205 849 aa6.91□□□□□ -1.3
ATG16YMR159C FRT1Q99332 602 aa6.91□□□□□ -1.3
ATG16YMR159C AIM46P38885 310 aa6.89□□□□□ -1.31
ATG16YMR159C PSY2P40164 858 aa6.89□□□□□ -1.31
ATG16YMR159C YNL011CP53980 444 aa6.89□□□□□ -1.31
ATG16YMR159C EMG1Q06287 252 aaKnown RBP6.89□□□□□ -1.31
ATG16YMR159C TIF6Q12522 245 aaKnown RBP6.89□□□□□ -1.31
ATG16YMR159C IDI1P15496 288 aa6.88□□□□□ -1.31
ATG16YMR159C PRK1P40494 810 aa6.88□□□□□ -1.31
ATG16YMR159C CDC55Q00362 526 aa6.88□□□□□ -1.31
ATG16YMR159C RSC2Q06488 889 aa6.88□□□□□ -1.31
ATG16YMR159C GPM1P00950 247 aaKnown RBP6.87□□□□□ -1.31
ATG16YMR159C TRK2P28584 889 aa6.87□□□□□ -1.31
ATG16YMR159C KNS1P32350 737 aaPredicted RBP6.86□□□□□ -1.31
ATG16YMR159C GPI13Q07830 1017 aa6.86□□□□□ -1.31
ATG16YMR159C PDC5P16467 563 aaKnown RBP6.85□□□□□ -1.31
ATG16YMR159C HEM3P28789 327 aa6.84□□□□□ -1.31
ATG16YMR159C IPL1P38991 367 aa6.84□□□□□ -1.31
ATG16YMR159C PPT1P53043 513 aa6.83□□□□□ -1.32
ATG16YMR159C SAM37P50110 327 aa6.82□□□□□ -1.32
ATG16YMR159C BSC2Q05611 235 aa6.82□□□□□ -1.32
ATG16YMR159C WHI5Q12416 295 aa6.82□□□□□ -1.32
ATG16YMR159C MET4P32389 672 aa6.81□□□□□ -1.32
ATG16YMR159C AI1P03875 834 aa6.79□□□□□ -1.32
ATG16YMR159C PHO4P07270 312 aaKnown RBP6.79□□□□□ -1.32
ATG16YMR159C FUS1P11710 512 aa6.79□□□□□ -1.32
ATG16YMR159C PYC2P32327 1180 aaKnown RBP6.79□□□□□ -1.32
ATG16YMR159C GCD6P32501 712 aaKnown RBP6.79□□□□□ -1.32
ATG16YMR159C INP51P40559 946 aaKnown RBP6.79□□□□□ -1.32
ATG16YMR159C CTR9P89105 1077 aa6.79□□□□□ -1.32
ATG16YMR159C MRP10O75012 95 aa6.78□□□□□ -1.32
ATG16YMR159C FLP1P03870 423 aa6.78□□□□□ -1.32
ATG16YMR159C VPS35P34110 944 aa6.78□□□□□ -1.32
ATG16YMR159C THI12P42883 340 aa6.78□□□□□ -1.32
ATG16YMR159C THI5P43534 340 aa6.78□□□□□ -1.32
ATG16YMR159C THI11P47183 340 aa6.78□□□□□ -1.32
ATG16YMR159C BIO5P53744 561 aaKnown RBP6.78□□□□□ -1.32
ATG16YMR159C THI13Q07748 340 aa6.78□□□□□ -1.32
ATG16YMR159C NOC3Q07896 663 aaPredicted RBP6.78□□□□□ -1.32
ATG16YMR159C MET1P36150 593 aa6.77□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 31.7 ms