RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C DAK2P43550 591 aa9.42□□□□□ -0.9
ATG17YLR423C YNL165WP53891 406 aa9.42□□□□□ -0.9
ATG17YLR423C RAS1P01119 309 aa9.41□□□□□ -0.9
ATG17YLR423C AFT1P22149 690 aa9.41□□□□□ -0.9
ATG17YLR423C VPS35P34110 944 aa9.41□□□□□ -0.9
ATG17YLR423C CIC1P38779 376 aaKnown RBP9.41□□□□□ -0.9
ATG17YLR423C RAD55P38953 406 aa9.41□□□□□ -0.9
ATG17YLR423C SSN3P39073 555 aa9.41□□□□□ -0.9
ATG17YLR423C JJJ2P46997 583 aa9.41□□□□□ -0.9
ATG17YLR423C MCM2P29469 868 aa9.4□□□□□ -0.9
ATG17YLR423C PEP7P32609 515 aa9.4□□□□□ -0.9
ATG17YLR423C KTR2P33550 425 aa9.4□□□□□ -0.9
ATG17YLR423C YBR287WP38355 427 aa9.4□□□□□ -0.9
ATG17YLR423C FYV10P40492 516 aa9.4□□□□□ -0.9
ATG17YLR423C MSN5P52918 1224 aa9.4□□□□□ -0.9
ATG17YLR423C NOC3Q07896 663 aaPredicted RBP9.4□□□□□ -0.9
ATG17YLR423C AIR1P40507 360 aaKnown RBP9.39□□□□□ -0.91
ATG17YLR423C BSC2Q05611 235 aa9.39□□□□□ -0.91
ATG17YLR423C MTO1P53070 669 aa9.38□□□□□ -0.91
ATG17YLR423C SPR28Q04921 423 aa9.37□□□□□ -0.91
ATG17YLR423C IRE1P32361 1115 aa9.36□□□□□ -0.91
ATG17YLR423C KAP122P32767 1081 aa9.36□□□□□ -0.91
ATG17YLR423C MAD1P40957 749 aa9.36□□□□□ -0.91
ATG17YLR423C MSN1P22148 382 aa9.35□□□□□ -0.91
ATG17YLR423C DLD1P32891 587 aa9.35□□□□□ -0.91
ATG17YLR423C PTK2P47116 818 aaKnown RBP9.35□□□□□ -0.91
ATG17YLR423C IRS4P36115 615 aaKnown RBP9.34□□□□□ -0.91
ATG17YLR423C RPS26AP39938 119 aaKnown RBP9.34□□□□□ -0.91
ATG17YLR423C RPS26BP39939 119 aaKnown RBP9.34□□□□□ -0.91
ATG17YLR423C NTA1P40354 457 aa9.34□□□□□ -0.91
ATG17YLR423C RSC4Q02206 625 aa9.34□□□□□ -0.91
ATG17YLR423C SHM1P37292 490 aaPredicted RBP9.33□□□□□ -0.92
ATG17YLR423C ISW1P38144 1129 aa9.33□□□□□ -0.92
ATG17YLR423C NNF1P47149 201 aa9.33□□□□□ -0.92
ATG17YLR423C RMD1Q03441 430 aa9.33□□□□□ -0.92
ATG17YLR423C YHL008CP38750 627 aa9.32□□□□□ -0.92
ATG17YLR423C PSY2P40164 858 aa9.32□□□□□ -0.92
ATG17YLR423C RGD2P43556 714 aa9.32□□□□□ -0.92
ATG17YLR423C ESF1Q06344 628 aaKnown RBP9.32□□□□□ -0.92
ATG17YLR423C INP54Q08227 384 aaKnown RBP9.32□□□□□ -0.92
ATG17YLR423C TIF6Q12522 245 aaKnown RBP9.32□□□□□ -0.92
ATG17YLR423C RPS31P05759 152 aaKnown RBP9.31□□□□□ -0.92
ATG17YLR423C GIP1P38229 639 aa9.31□□□□□ -0.92
ATG17YLR423C YJR115WP47152 169 aa9.31□□□□□ -0.92
ATG17YLR423C DAL1P32375 460 aa9.3□□□□□ -0.92
ATG17YLR423C ECM2P38241 364 aaKnown RBP9.3□□□□□ -0.92
ATG17YLR423C YGR122WP53272 402 aa9.3□□□□□ -0.92
ATG17YLR423C LSC2P53312 427 aa9.3□□□□□ -0.92
ATG17YLR423C CLN2P20438 545 aa9.29□□□□□ -0.92
ATG17YLR423C BSD2P38356 321 aa9.29□□□□□ -0.92
ATG17YLR423C YOR296WQ08748 1289 aa9.29□□□□□ -0.92
ATG17YLR423C YTA7P40340 1379 aa9.28□□□□□ -0.92
ATG17YLR423C PDC6P26263 563 aaKnown RBP9.28□□□□□ -0.92
ATG17YLR423C MAG2Q06436 670 aaKnown RBP9.28□□□□□ -0.92
ATG17YLR423C DPS1P04802 557 aaKnown RBP9.27□□□□□ -0.93
ATG17YLR423C NUP85P46673 744 aa9.27□□□□□ -0.93
ATG17YLR423C VTC4P47075 721 aa9.27□□□□□ -0.93
ATG17YLR423C DAL4Q04895 635 aa9.27□□□□□ -0.93
ATG17YLR423C PSH1Q12161 406 aa9.27□□□□□ -0.93
ATG17YLR423C CYC8P14922 966 aa9.26□□□□□ -0.93
ATG17YLR423C SLA1P32790 1244 aa9.26□□□□□ -0.93
ATG17YLR423C PET112P33893 541 aa9.26□□□□□ -0.93
ATG17YLR423C AIM46P38885 310 aa9.26□□□□□ -0.93
ATG17YLR423C YJR098CP47139 656 aa9.26□□□□□ -0.93
ATG17YLR423C TY1A-DR3Q12441 440 aa9.26□□□□□ -0.93
ATG17YLR423C RPC31P17890 251 aa9.25□□□□□ -0.93
ATG17YLR423C OCA5P38738 679 aa9.25□□□□□ -0.93
ATG17YLR423C ALD6P54115 500 aaKnown RBP9.25□□□□□ -0.93
ATG17YLR423C RAD2P07276 1031 aa9.24□□□□□ -0.93
ATG17YLR423C VAC8P39968 578 aa9.24□□□□□ -0.93
ATG17YLR423C CWC24P53769 259 aa9.24□□□□□ -0.93
ATG17YLR423C YCS4Q06156 1176 aa9.24□□□□□ -0.93
ATG17YLR423C LEU1P07264 779 aaKnown RBP9.23□□□□□ -0.93
ATG17YLR423C KAR2P16474 682 aaKnown RBP9.23□□□□□ -0.93
ATG17YLR423C FAA3P39002 694 aa9.23□□□□□ -0.93
ATG17YLR423C MRPS18P42847 217 aa9.23□□□□□ -0.93
ATG17YLR423C CUS1Q02554 436 aaPredicted RBP9.23□□□□□ -0.93
ATG17YLR423C VPS16Q03308 798 aa9.23□□□□□ -0.93
ATG17YLR423C PIN2Q12057 282 aa9.23□□□□□ -0.93
ATG17YLR423C TCB1Q12466 1186 aa9.23□□□□□ -0.93
ATG17YLR423C FLP1P03870 423 aa9.21□□□□□ -0.94
ATG17YLR423C HXK1P04806 485 aaKnown RBP9.21□□□□□ -0.94
ATG17YLR423C PRP40P33203 583 aaKnown RBP9.21□□□□□ -0.94
ATG17YLR423C UBP15P50101 1230 aa9.21□□□□□ -0.94
ATG17YLR423C TOS4Q06266 489 aa9.21□□□□□ -0.94
ATG17YLR423C MCD1Q12158 566 aa9.21□□□□□ -0.94
ATG17YLR423C RGP1P16664 663 aa9.2□□□□□ -0.94
ATG17YLR423C MNR2P35724 969 aa9.2□□□□□ -0.94
ATG17YLR423C WRS1Q12109 432 aaKnown RBP9.2□□□□□ -0.94
ATG17YLR423C PRE9P23638 258 aaKnown RBP9.19□□□□□ -0.94
ATG17YLR423C NAB2P32505 525 aaKnown RBP RIP-Chip data9.19□□□□□ -0.94not detected
ATG17YLR423C ALD3P54114 506 aa9.19□□□□□ -0.94
ATG17YLR423C EMG1Q06287 252 aaKnown RBP9.19□□□□□ -0.94
ATG17YLR423C APM2P38700 605 aa9.18□□□□□ -0.94
ATG17YLR423C MON1P53129 644 aa9.18□□□□□ -0.94
ATG17YLR423C UBP2Q01476 1272 aa9.18□□□□□ -0.94
ATG17YLR423C SKP1P52286 194 aa9.17□□□□□ -0.94
ATG17YLR423C YLR346CQ06139 101 aa9.17□□□□□ -0.94
ATG17YLR423C RPP1AP05318 106 aaPredicted RBP9.16□□□□□ -0.94
ATG17YLR423C NCL1P38205 684 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 5,963 RNA–protein pairs in 92.1 ms