RNA–Protein interactions for RNA: YLR098C

CHA4, Transcript of DNA binding transcriptional activator, yeast

Gene CHA4, Length 1,947 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHA4	YLR098C	THO2	P53552	1597 aa	Known RBP	4.88	□□□□□ -1.63
CHA4	YLR098C	KNS1	P32350	737 aa	Predicted RBP	4.87	□□□□□ -1.63
CHA4	YLR098C	KAP122	P32767	1081 aa		4.87	□□□□□ -1.63
CHA4	YLR098C	TRS33	Q99394	268 aa		4.87	□□□□□ -1.63
CHA4	YLR098C	RPP1A	P05318	106 aa	Predicted RBP	4.87	□□□□□ -1.63
CHA4	YLR098C	BOI2	P39969	1040 aa		4.87	□□□□□ -1.63
CHA4	YLR098C	CWH41	P53008	833 aa		4.87	□□□□□ -1.63
CHA4	YLR098C	CUS1	Q02554	436 aa	Predicted RBP	4.87	□□□□□ -1.63
CHA4	YLR098C	SKP1	P52286	194 aa		4.86	□□□□□ -1.63
CHA4	YLR098C	CAB1	Q04430	367 aa		4.86	□□□□□ -1.63
CHA4	YLR098C	MMS22	Q06164	1454 aa		4.86	□□□□□ -1.63
CHA4	YLR098C	XRN1	P22147	1528 aa	Known RBP	4.86	□□□□□ -1.63
CHA4	YLR098C	MCX1	P38323	520 aa	Predicted RBP	4.85	□□□□□ -1.63
CHA4	YLR098C	QDR2	P40474	542 aa		4.85	□□□□□ -1.63
CHA4	YLR098C	YMR187C	Q03236	431 aa		4.85	□□□□□ -1.63
CHA4	YLR098C	CCT8	P47079	568 aa	Known RBP	4.85	□□□□□ -1.63
CHA4	YLR098C	YNR040W	P53736	256 aa		4.85	□□□□□ -1.63
CHA4	YLR098C	FOX2	Q02207	900 aa	Known RBP	4.85	□□□□□ -1.63
CHA4	YLR098C	HEH2	Q03281	663 aa		4.85	□□□□□ -1.63
CHA4	YLR098C	SIN3	P22579	1536 aa		4.85	□□□□□ -1.63
CHA4	YLR098C	PRK1	P40494	810 aa		4.84	□□□□□ -1.63
CHA4	YLR098C	YML083C	Q04526	418 aa		4.84	□□□□□ -1.63
CHA4	YLR098C	RPC31	P17890	251 aa		4.84	□□□□□ -1.64
CHA4	YLR098C	MET1	P36150	593 aa		4.84	□□□□□ -1.64
CHA4	YLR098C	NCL1	P38205	684 aa	Known RBP	4.84	□□□□□ -1.64
CHA4	YLR098C	SKN7	P38889	622 aa		4.84	□□□□□ -1.64
CHA4	YLR098C	REV3	P14284	1504 aa		4.83	□□□□□ -1.64
CHA4	YLR098C	YCK2	P23292	546 aa	Known RBP	4.83	□□□□□ -1.64
CHA4	YLR098C	YBR197C	P38306	217 aa		4.83	□□□□□ -1.64
CHA4	YLR098C	SSK2	P53599	1579 aa		4.83	□□□□□ -1.64
CHA4	YLR098C	MRPL33	P20084	86 aa		4.82	□□□□□ -1.64
CHA4	YLR098C	VMA3	P25515	160 aa		4.82	□□□□□ -1.64
CHA4	YLR098C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
CHA4	YLR098C	NOB1	Q08444	459 aa	Known RBP	4.82	□□□□□ -1.64
CHA4	YLR098C	APM2	P38700	605 aa		4.82	□□□□□ -1.64
CHA4	YLR098C	SLN1	P39928	1220 aa	Predicted RBP	4.82	□□□□□ -1.64
CHA4	YLR098C	ALD4	P46367	519 aa	Known RBP	4.82	□□□□□ -1.64
CHA4	YLR098C	PUN1	Q06991	263 aa		4.82	□□□□□ -1.64
CHA4	YLR098C	SSA4	P22202	642 aa	Known RBP	4.81	□□□□□ -1.64
CHA4	YLR098C	YDR215C	Q12240	137 aa		4.81	□□□□□ -1.64
CHA4	YLR098C	ISC10	P32645	267 aa		4.8	□□□□□ -1.64
CHA4	YLR098C	PGM2	P37012	569 aa	Known RBP	4.8	□□□□□ -1.64
CHA4	YLR098C	ALG14	P38242	237 aa		4.8	□□□□□ -1.64
CHA4	YLR098C	ITC1	P53125	1264 aa		4.8	□□□□□ -1.64
CHA4	YLR098C	PUF6	Q04373	656 aa	Known RBP	4.8	□□□□□ -1.64
CHA4	YLR098C	MYO2	P19524	1574 aa	Known RBP	4.79	□□□□□ -1.64
CHA4	YLR098C	ESP1	Q03018	1630 aa		4.79	□□□□□ -1.64
CHA4	YLR098C	MRP10	O75012	95 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	BSD2	P38356	321 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	DYS1	P38791	387 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	YOR296W	Q08748	1289 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	SRS2	P12954	1174 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	LDH1	P38139	375 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	PRY1	P47032	299 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	CWC15	Q03772	175 aa	Known RBP	4.78	□□□□□ -1.64
CHA4	YLR098C	NHA1	Q99271	985 aa		4.78	□□□□□ -1.64
CHA4	YLR098C	IDI1	P15496	288 aa		4.77	□□□□□ -1.65
CHA4	YLR098C	NAR1	P23503	491 aa	Known RBP	4.77	□□□□□ -1.65
CHA4	YLR098C	GIS4	Q04233	774 aa		4.77	□□□□□ -1.65
CHA4	YLR098C	MCA1	Q08601	432 aa		4.77	□□□□□ -1.65
CHA4	YLR098C	TAT1	P38085	619 aa		4.76	□□□□□ -1.65
CHA4	YLR098C	GIP1	P38229	639 aa		4.76	□□□□□ -1.65
CHA4	YLR098C	TPS3	P38426	1054 aa	Known RBP	4.76	□□□□□ -1.65
CHA4	YLR098C	MON2	P48563	1636 aa	Predicted RBP	4.76	□□□□□ -1.65
CHA4	YLR098C	UFD4	P33202	1483 aa		4.75	□□□□□ -1.65
CHA4	YLR098C	STU1	P38198	1513 aa		4.75	□□□□□ -1.65
CHA4	YLR098C	SWR1	Q05471	1514 aa		4.75	□□□□□ -1.65
CHA4	YLR098C	YER156C	P40093	338 aa	Known RBP	4.75	□□□□□ -1.65
CHA4	YLR098C	AMN1	P38285	549 aa	Predicted RBP	4.74	□□□□□ -1.65
CHA4	YLR098C	PNP1	Q05788	311 aa		4.74	□□□□□ -1.65
CHA4	YLR098C	MSN1	P22148	382 aa		4.74	□□□□□ -1.65
CHA4	YLR098C	TAF2	P23255	1407 aa		4.73	□□□□□ -1.65
CHA4	YLR098C	BOI1	P38041	980 aa	Known RBP	4.73	□□□□□ -1.65
CHA4	YLR098C	ISW1	P38144	1129 aa		4.73	□□□□□ -1.65
CHA4	YLR098C	LSB6	P42951	607 aa		4.73	□□□□□ -1.65
CHA4	YLR098C	BUD9	P53226	547 aa		4.73	□□□□□ -1.65
CHA4	YLR098C	SUB2	Q07478	446 aa	Known RBP	4.73	□□□□□ -1.65
CHA4	YLR098C	RLF2	Q12495	606 aa		4.73	□□□□□ -1.65
CHA4	YLR098C	POL1	P13382	1468 aa		4.72	□□□□□ -1.65
CHA4	YLR098C	SBP1	P10080	294 aa	Known RBP	4.72	□□□□□ -1.65
CHA4	YLR098C	GAS5	Q08193	484 aa		4.72	□□□□□ -1.65
CHA4	YLR098C	RRM3	P38766	723 aa		4.71	□□□□□ -1.66
CHA4	YLR098C	YIL165C	P40446	119 aa		4.71	□□□□□ -1.66
CHA4	YLR098C	RRN6	P32786	894 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	KTR2	P33550	425 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	HXT8	P40886	569 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	YJL181W	P46987	611 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	PPT1	P53043	513 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	YPL034W	Q03083	165 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	YTA7	P40340	1379 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	SUT1	P53032	299 aa	Known RBP	4.7	□□□□□ -1.66
CHA4	YLR098C	EMG1	Q06287	252 aa	Known RBP	4.7	□□□□□ -1.66
CHA4	YLR098C	RSC2	Q06488	889 aa		4.7	□□□□□ -1.66
CHA4	YLR098C	RPB10	P22139	70 aa		4.69	□□□□□ -1.66
CHA4	YLR098C	FIR1	P40020	876 aa		4.68	□□□□□ -1.66
CHA4	YLR098C	TED1	P40533	473 aa		4.68	□□□□□ -1.66
CHA4	YLR098C	SOK2	P53438	785 aa	Predicted RBP	4.68	□□□□□ -1.66
CHA4	YLR098C	APC11	Q12157	165 aa		4.68	□□□□□ -1.66
CHA4	YLR098C	TRM732	Q03496	1420 aa		4.68	□□□□□ -1.66
CHA4	YLR098C	AI3	P03877	415 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms