RNA–Protein interactions for RNA: YLR026C

SED5, Transcript of cis-Golgi t-SNARE syntaxin, yeastyeast

Gene SED5, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED5YLR026C NAB2P32505 525 aaKnown RBP RIP-Chip data8.63□□□□□ -1.03not detected
SED5YLR026C YNR040WP53736 256 aa8.63□□□□□ -1.03
SED5YLR026C THI72Q08579 599 aa8.63□□□□□ -1.03
SED5YLR026C AI1P03875 834 aa8.62□□□□□ -1.03
SED5YLR026C RPL34AP87262 121 aaPredicted RBP8.62□□□□□ -1.03
SED5YLR026C RPP1AP05318 106 aaPredicted RBP8.61□□□□□ -1.03
SED5YLR026C LDH1P38139 375 aa8.6□□□□□ -1.03
SED5YLR026C NCL1P38205 684 aaKnown RBP8.6□□□□□ -1.03
SED5YLR026C SSA1P10591 642 aaKnown RBP8.59□□□□□ -1.03
SED5YLR026C APM2P38700 605 aa8.59□□□□□ -1.03
SED5YLR026C DYS1P38791 387 aa8.59□□□□□ -1.03
SED5YLR026C SBE2P42223 864 aaKnown RBP8.59□□□□□ -1.03
SED5YLR026C YFL066CP43538 392 aa8.59□□□□□ -1.03
SED5YLR026C NSG2P53898 299 aa8.59□□□□□ -1.03
SED5YLR026C PDC5P16467 563 aaKnown RBP8.58□□□□□ -1.04
SED5YLR026C RRN6P32786 894 aa8.58□□□□□ -1.04
SED5YLR026C BOI1P38041 980 aaKnown RBP8.58□□□□□ -1.04
SED5YLR026C BSD2P38356 321 aa8.58□□□□□ -1.04
SED5YLR026C HEH2Q03281 663 aa8.57□□□□□ -1.04
SED5YLR026C YOR296WQ08748 1289 aa8.57□□□□□ -1.04
SED5YLR026C BOL3P39724 118 aa8.56□□□□□ -1.04
SED5YLR026C KNS1P32350 737 aaPredicted RBP8.55□□□□□ -1.04
SED5YLR026C ICP55P40051 511 aa8.55□□□□□ -1.04
SED5YLR026C PRK1P40494 810 aa8.55□□□□□ -1.04
SED5YLR026C ITC1P53125 1264 aa8.55□□□□□ -1.04
SED5YLR026C FUR4P05316 633 aaKnown RBP8.54□□□□□ -1.04
SED5YLR026C GIP1P38229 639 aa8.54□□□□□ -1.04
SED5YLR026C SUT1P53032 299 aaKnown RBP8.54□□□□□ -1.04
SED5YLR026C YNR014WP53719 212 aa8.54□□□□□ -1.04
SED5YLR026C MSN1P22148 382 aa8.53□□□□□ -1.04
SED5YLR026C TAF7Q05021 590 aa8.52□□□□□ -1.05
SED5YLR026C PHM7Q12252 991 aa8.52□□□□□ -1.05
SED5YLR026C LSO1Q3E827 93 aa8.52□□□□□ -1.05
SED5YLR026C RPB10P22139 70 aa8.51□□□□□ -1.05
SED5YLR026C KTR2P33550 425 aa8.51□□□□□ -1.05
SED5YLR026C HXT8P40886 569 aa8.51□□□□□ -1.05
SED5YLR026C TDA6Q06466 467 aa8.51□□□□□ -1.05
SED5YLR026C ISW1P38144 1129 aa8.5□□□□□ -1.05
SED5YLR026C KAR5Q04746 504 aa8.5□□□□□ -1.05
SED5YLR026C APC11Q12157 165 aa8.5□□□□□ -1.05
SED5YLR026C PUS1Q12211 544 aaKnown RBP8.5□□□□□ -1.05
SED5YLR026C MRP10O75012 95 aa8.49□□□□□ -1.05
SED5YLR026C IDI1P15496 288 aa8.49□□□□□ -1.05
SED5YLR026C BOI2P39969 1040 aa8.49□□□□□ -1.05
SED5YLR026C GEF1P37020 779 aa8.48□□□□□ -1.05
SED5YLR026C FIR1P40020 876 aa8.47□□□□□ -1.05
SED5YLR026C MET1P36150 593 aa8.45□□□□□ -1.06
SED5YLR026C ALG14P38242 237 aa8.45□□□□□ -1.06
SED5YLR026C GLO3P38682 493 aaKnown RBP8.45□□□□□ -1.06
SED5YLR026C RGD2P43556 714 aa8.45□□□□□ -1.06
SED5YLR026C MTC5Q03897 1148 aa8.45□□□□□ -1.06
SED5YLR026C PGM2P37012 569 aaKnown RBP8.44□□□□□ -1.06
SED5YLR026C YER156CP40093 338 aaKnown RBP8.44□□□□□ -1.06
SED5YLR026C YIL165CP40446 119 aa8.44□□□□□ -1.06
SED5YLR026C NAR1P23503 491 aaKnown RBP8.43□□□□□ -1.06
SED5YLR026C CDC3P32457 520 aaKnown RBP8.43□□□□□ -1.06
SED5YLR026C QDR1P40475 563 aa8.43□□□□□ -1.06
SED5YLR026C EMG1Q06287 252 aaKnown RBP8.43□□□□□ -1.06
SED5YLR026C MCX1P38323 520 aaPredicted RBP8.42□□□□□ -1.06
SED5YLR026C YJL181WP46987 611 aa8.42□□□□□ -1.06
SED5YLR026C YMR187CQ03236 431 aa8.42□□□□□ -1.06
SED5YLR026C YPR053CQ6Q5F3 151 aa8.42□□□□□ -1.06
SED5YLR026C RAD55P38953 406 aa8.41□□□□□ -1.06
SED5YLR026C GIS4Q04233 774 aa8.41□□□□□ -1.06
SED5YLR026C AIM46P38885 310 aa8.4□□□□□ -1.06
SED5YLR026C NTA1P40354 457 aa8.4□□□□□ -1.06
SED5YLR026C PPT1P53043 513 aa8.4□□□□□ -1.06
SED5YLR026C TIF6Q12522 245 aaKnown RBP8.4□□□□□ -1.06
SED5YLR026C NHA1Q99271 985 aa8.4□□□□□ -1.06
SED5YLR026C YBR287WP38355 427 aa8.39□□□□□ -1.07
SED5YLR026C YCK2P23292 546 aaKnown RBP8.38□□□□□ -1.07
SED5YLR026C SMC1P32908 1225 aa8.38□□□□□ -1.07
SED5YLR026C LSB3P43603 459 aaKnown RBP8.38□□□□□ -1.07
SED5YLR026C RSC2Q06488 889 aa8.38□□□□□ -1.07
SED5YLR026C SLN1P39928 1220 aaPredicted RBP8.37□□□□□ -1.07
SED5YLR026C ATG1P53104 897 aa8.37□□□□□ -1.07
SED5YLR026C HAT1Q12341 374 aa8.37□□□□□ -1.07
SED5YLR026C GRS1P38088 690 aaKnown RBP8.36□□□□□ -1.07
SED5YLR026C PSY2P40164 858 aa8.36□□□□□ -1.07
SED5YLR026C PRY1P47032 299 aa8.36□□□□□ -1.07
SED5YLR026C YDR215CQ12240 137 aa8.36□□□□□ -1.07
SED5YLR026C ERP5P38819 212 aa8.35□□□□□ -1.07
SED5YLR026C TRL1P09880 827 aaKnown RBP8.34□□□□□ -1.07
SED5YLR026C IRS4P36115 615 aaKnown RBP8.34□□□□□ -1.07
SED5YLR026C SKN7P38889 622 aa8.34□□□□□ -1.07
SED5YLR026C SOK2P53438 785 aaPredicted RBP8.34□□□□□ -1.07
SED5YLR026C YBL113CQ7M4S9 792 aa8.34□□□□□ -1.07
SED5YLR026C INP51P40559 946 aaKnown RBP8.32□□□□□ -1.08
SED5YLR026C CCT8P47079 568 aaKnown RBP8.32□□□□□ -1.08
SED5YLR026C ACF4P47129 309 aa8.32□□□□□ -1.08
SED5YLR026C RRM3P38766 723 aa8.31□□□□□ -1.08
SED5YLR026C TED1P40533 473 aa8.31□□□□□ -1.08
SED5YLR026C MDJ2P42834 146 aa8.31□□□□□ -1.08
SED5YLR026C GIP2P40036 548 aa8.3□□□□□ -1.08
SED5YLR026C BUD9P53226 547 aa8.3□□□□□ -1.08
SED5YLR026C ALD3P54114 506 aa8.3□□□□□ -1.08
SED5YLR026C GAS5Q08193 484 aa8.3□□□□□ -1.08
SED5YLR026C MCA1Q08601 432 aa8.3□□□□□ -1.08
SED5YLR026C TFA2P36145 328 aa8.29□□□□□ -1.08
SED5YLR026C TAT1P38085 619 aa8.29□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms