RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W STB3Q12427 513 aa8.38□□□□□ -1.07
MSA2YKR077W RPS31P05759 152 aaKnown RBP8.37□□□□□ -1.07
MSA2YKR077W YML020WQ03722 664 aa8.37□□□□□ -1.07
MSA2YKR077W FPS1P23900 669 aa8.36□□□□□ -1.07
MSA2YKR077W MRPL16P38064 232 aa8.36□□□□□ -1.07
MSA2YKR077W YBL113CQ7M4S9 792 aa8.36□□□□□ -1.07
MSA2YKR077W MRPL33P20084 86 aa8.35□□□□□ -1.07
MSA2YKR077W LSB3P43603 459 aaKnown RBP8.35□□□□□ -1.07
MSA2YKR077W LSO1Q3E827 93 aa8.35□□□□□ -1.07
MSA2YKR077W SBE2P42223 864 aaKnown RBP8.34□□□□□ -1.07
MSA2YKR077W ATG1P53104 897 aa8.34□□□□□ -1.07
MSA2YKR077W GLO3P38682 493 aaKnown RBP8.33□□□□□ -1.08
MSA2YKR077W ERP5P38819 212 aa8.33□□□□□ -1.08
MSA2YKR077W BOI1P38041 980 aaKnown RBP8.32□□□□□ -1.08
MSA2YKR077W TRL1P09880 827 aaKnown RBP8.31□□□□□ -1.08
MSA2YKR077W VMA3P25515 160 aa8.31□□□□□ -1.08
MSA2YKR077W GRS1P38088 690 aaKnown RBP8.31□□□□□ -1.08
MSA2YKR077W QDR1P40475 563 aa8.31□□□□□ -1.08
MSA2YKR077W NOP8Q08287 484 aaPredicted RBP8.31□□□□□ -1.08
MSA2YKR077W GPM1P00950 247 aaKnown RBP8.3□□□□□ -1.08
MSA2YKR077W LEU1P07264 779 aaKnown RBP8.3□□□□□ -1.08
MSA2YKR077W ALD2P47771 506 aa8.3□□□□□ -1.08
MSA2YKR077W MTO1P53070 669 aa8.3□□□□□ -1.08
MSA2YKR077W APC11Q12157 165 aa8.3□□□□□ -1.08
MSA2YKR077W YPR053CQ6Q5F3 151 aa8.3□□□□□ -1.08
MSA2YKR077W KAP122P32767 1081 aa8.29□□□□□ -1.08
MSA2YKR077W QDR2P40474 542 aa8.29□□□□□ -1.08
MSA2YKR077W SPR3P41901 512 aa8.29□□□□□ -1.08
MSA2YKR077W TDA6Q06466 467 aa8.29□□□□□ -1.08
MSA2YKR077W DYS1P38791 387 aa8.28□□□□□ -1.08
MSA2YKR077W YNR014WP53719 212 aa8.28□□□□□ -1.08
MSA2YKR077W RPB10P22139 70 aa8.27□□□□□ -1.09
MSA2YKR077W SLD2P34252 453 aa8.27□□□□□ -1.09
MSA2YKR077W LDH1P38139 375 aa8.27□□□□□ -1.09
MSA2YKR077W ACF4P47129 309 aa8.27□□□□□ -1.09
MSA2YKR077W STM1P39015 273 aaKnown RBP8.26□□□□□ -1.09
MSA2YKR077W MDJ2P42834 146 aa8.26□□□□□ -1.09
MSA2YKR077W SUT1P53032 299 aaKnown RBP8.26□□□□□ -1.09
MSA2YKR077W RGP1P16664 663 aa8.24□□□□□ -1.09
MSA2YKR077W TY1A-DR2Q03964 440 aaKnown RBP8.24□□□□□ -1.09
MSA2YKR077W RPP1AP05318 106 aaPredicted RBP8.23□□□□□ -1.09
MSA2YKR077W PDC5P16467 563 aaKnown RBP8.23□□□□□ -1.09
MSA2YKR077W RPC31P17890 251 aa8.23□□□□□ -1.09
MSA2YKR077W KTR2P33550 425 aa8.23□□□□□ -1.09
MSA2YKR077W HXT8P40886 569 aa8.23□□□□□ -1.09
MSA2YKR077W KNS1P32350 737 aaPredicted RBP8.22□□□□□ -1.09
MSA2YKR077W CCT8P47079 568 aaKnown RBP8.22□□□□□ -1.09
MSA2YKR077W YMR187CQ03236 431 aa8.22□□□□□ -1.09
MSA2YKR077W YHL050CP38721 697 aa8.21□□□□□ -1.1
MSA2YKR077W YHR219WP38900 624 aa8.21□□□□□ -1.1
MSA2YKR077W SKP1P52286 194 aa8.21□□□□□ -1.1
MSA2YKR077W CUS1Q02554 436 aaPredicted RBP8.21□□□□□ -1.1
MSA2YKR077W SEN54Q02825 467 aaPredicted RBP8.21□□□□□ -1.1
MSA2YKR077W MSC7P38694 644 aa8.2□□□□□ -1.1
MSA2YKR077W BOI2P39969 1040 aa8.2□□□□□ -1.1
MSA2YKR077W UFD2P54860 961 aa8.2□□□□□ -1.1
MSA2YKR077W YOR296WQ08748 1289 aa8.2□□□□□ -1.1
MSA2YKR077W MSN1P22148 382 aa8.19□□□□□ -1.1
MSA2YKR077W SMC1P32908 1225 aa8.19□□□□□ -1.1
MSA2YKR077W GIP1P38229 639 aa8.19□□□□□ -1.1
MSA2YKR077W FIR1P40020 876 aa8.19□□□□□ -1.1
MSA2YKR077W TRS120Q04183 1289 aa8.19□□□□□ -1.1
MSA2YKR077W NUT2Q06213 157 aa8.19□□□□□ -1.1
MSA2YKR077W SEC20P28791 383 aa8.18□□□□□ -1.1
MSA2YKR077W ISW1P38144 1129 aa8.18□□□□□ -1.1
MSA2YKR077W MCX1P38323 520 aaPredicted RBP8.18□□□□□ -1.1
MSA2YKR077W BSD2P38356 321 aa8.18□□□□□ -1.1
MSA2YKR077W SKN7P38889 622 aa8.18□□□□□ -1.1
MSA2YKR077W FRT1Q99332 602 aa8.18□□□□□ -1.1
MSA2YKR077W MET1P36150 593 aa8.17□□□□□ -1.1
MSA2YKR077W MSC6Q08818 692 aaKnown RBP8.17□□□□□ -1.1
MSA2YKR077W APM2P38700 605 aa8.16□□□□□ -1.1
MSA2YKR077W NAB2P32505 525 aaKnown RBP RIP-Chip data8.15□□□□□ -1.1not detected
MSA2YKR077W NCL1P38205 684 aaKnown RBP8.15□□□□□ -1.1
MSA2YKR077W YBR287WP38355 427 aa8.15□□□□□ -1.1
MSA2YKR077W PPX1P38698 397 aa8.15□□□□□ -1.1
MSA2YKR077W RAD55P38953 406 aa8.15□□□□□ -1.1
MSA2YKR077W IPL1P38991 367 aa8.15□□□□□ -1.1
MSA2YKR077W NTA1P40354 457 aa8.15□□□□□ -1.1
MSA2YKR077W RGD2P43556 714 aa8.14□□□□□ -1.11
MSA2YKR077W YDR215CQ12240 137 aa8.13□□□□□ -1.11
MSA2YKR077W YCK2P23292 546 aaKnown RBP8.12□□□□□ -1.11
MSA2YKR077W ITC1P53125 1264 aa8.12□□□□□ -1.11
MSA2YKR077W YNR040WP53736 256 aa8.11□□□□□ -1.11
MSA2YKR077W HEH2Q03281 663 aa8.11□□□□□ -1.11
MSA2YKR077W TIF6Q12522 245 aaKnown RBP8.11□□□□□ -1.11
MSA2YKR077W IRS4P36115 615 aaKnown RBP8.1□□□□□ -1.11
MSA2YKR077W PSY2P40164 858 aa8.1□□□□□ -1.11
MSA2YKR077W MNL2Q12205 849 aa8.1□□□□□ -1.11
MSA2YKR077W HEM3P28789 327 aa8.09□□□□□ -1.11
MSA2YKR077W AIM46P38885 310 aa8.09□□□□□ -1.11
MSA2YKR077W SLN1P39928 1220 aaPredicted RBP8.09□□□□□ -1.11
MSA2YKR077W PRK1P40494 810 aa8.09□□□□□ -1.11
MSA2YKR077W THI12P42883 340 aa8.09□□□□□ -1.11
MSA2YKR077W THI5P43534 340 aa8.09□□□□□ -1.11
MSA2YKR077W THI11P47183 340 aa8.09□□□□□ -1.11
MSA2YKR077W YNL011CP53980 444 aa8.09□□□□□ -1.11
MSA2YKR077W THI13Q07748 340 aa8.09□□□□□ -1.11
MSA2YKR077W WHI5Q12416 295 aa8.09□□□□□ -1.11
MSA2YKR077W YIL165CP40446 119 aa8.08□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms