RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	THI72	Q08579	599 aa		4.82	□□□□□ -1.64
SPE1	YKL184W	FUR4	P05316	633 aa	Known RBP	4.81	□□□□□ -1.64
SPE1	YKL184W	APM2	P38700	605 aa		4.81	□□□□□ -1.64
SPE1	YKL184W	SKP1	P52286	194 aa		4.81	□□□□□ -1.64
SPE1	YKL184W	NSG2	P53898	299 aa		4.81	□□□□□ -1.64
SPE1	YKL184W	CUS1	Q02554	436 aa	Predicted RBP	4.81	□□□□□ -1.64
SPE1	YKL184W	PUS1	Q12211	544 aa	Known RBP	4.81	□□□□□ -1.64
SPE1	YKL184W	GPM1	P00950	247 aa	Known RBP	4.8	□□□□□ -1.64
SPE1	YKL184W	SSA1	P10591	642 aa	Known RBP	4.8	□□□□□ -1.64
SPE1	YKL184W	VMA3	P25515	160 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	ISC10	P32645	267 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	MET1	P36150	593 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	PHM7	Q12252	991 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	FIR1	P40020	876 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	YNR014W	P53719	212 aa		4.8	□□□□□ -1.64
SPE1	YKL184W	TY1A-DR2	Q03964	440 aa	Known RBP	4.8	□□□□□ -1.64
SPE1	YKL184W	KNS1	P32350	737 aa	Predicted RBP	4.79	□□□□□ -1.64
SPE1	YKL184W	RPC31	P17890	251 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	MDJ1	P35191	511 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	ISW1	P38144	1129 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	GIP1	P38229	639 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	MTC5	Q03897	1148 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	TAF7	Q05021	590 aa		4.78	□□□□□ -1.64
SPE1	YKL184W	PDC5	P16467	563 aa	Known RBP	4.77	□□□□□ -1.65
SPE1	YKL184W	YOR296W	Q08748	1289 aa		4.77	□□□□□ -1.65
SPE1	YKL184W	MSC7	P38694	644 aa		4.76	□□□□□ -1.65
SPE1	YKL184W	BOI2	P39969	1040 aa		4.76	□□□□□ -1.65
SPE1	YKL184W	HXT8	P40886	569 aa		4.75	□□□□□ -1.65
SPE1	YKL184W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
SPE1	YKL184W	YNR040W	P53736	256 aa		4.74	□□□□□ -1.65
SPE1	YKL184W	KAR5	Q04746	504 aa		4.74	□□□□□ -1.65
SPE1	YKL184W	RSC2	Q06488	889 aa		4.74	□□□□□ -1.65
SPE1	YKL184W	MSN1	P22148	382 aa		4.73	□□□□□ -1.65
SPE1	YKL184W	TPS3	P38426	1054 aa	Known RBP	4.73	□□□□□ -1.65
SPE1	YKL184W	SBE2	P42223	864 aa	Known RBP	4.73	□□□□□ -1.65
SPE1	YKL184W	SUT1	P53032	299 aa	Known RBP	4.73	□□□□□ -1.65
SPE1	YKL184W	YMR187C	Q03236	431 aa		4.73	□□□□□ -1.65
SPE1	YKL184W	TDA6	Q06466	467 aa		4.73	□□□□□ -1.65
SPE1	YKL184W	YPR053C	Q6Q5F3	151 aa		4.73	□□□□□ -1.65
SPE1	YKL184W	GEF1	P37020	779 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	ALG14	P38242	237 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	BSD2	P38356	321 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	PRK1	P40494	810 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	YFL066C	P43538	392 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	ITC1	P53125	1264 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	LSO1	Q3E827	93 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	NHA1	Q99271	985 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	CDC3	P32457	520 aa	Known RBP	4.72	□□□□□ -1.65
SPE1	YKL184W	SMC1	P32908	1225 aa		4.72	□□□□□ -1.65
SPE1	YKL184W	YER156C	P40093	338 aa	Known RBP	4.72	□□□□□ -1.65
SPE1	YKL184W	MCX1	P38323	520 aa	Predicted RBP	4.71	□□□□□ -1.66
SPE1	YKL184W	GLO3	P38682	493 aa	Known RBP	4.71	□□□□□ -1.66
SPE1	YKL184W	AIM46	P38885	310 aa		4.71	□□□□□ -1.66
SPE1	YKL184W	IDI1	P15496	288 aa		4.7	□□□□□ -1.66
SPE1	YKL184W	PGM2	P37012	569 aa	Known RBP	4.7	□□□□□ -1.66
SPE1	YKL184W	RAD55	P38953	406 aa		4.7	□□□□□ -1.66
SPE1	YKL184W	BOL3	P39724	118 aa		4.7	□□□□□ -1.66
SPE1	YKL184W	YIL165C	P40446	119 aa		4.7	□□□□□ -1.66
SPE1	YKL184W	APC11	Q12157	165 aa		4.7	□□□□□ -1.66
SPE1	YKL184W	NTA1	P40354	457 aa		4.69	□□□□□ -1.66
SPE1	YKL184W	LSB3	P43603	459 aa	Known RBP	4.69	□□□□□ -1.66
SPE1	YKL184W	BOI1	P38041	980 aa	Known RBP	4.68	□□□□□ -1.66
SPE1	YKL184W	QDR1	P40475	563 aa		4.68	□□□□□ -1.66
SPE1	YKL184W	YJL181W	P46987	611 aa		4.68	□□□□□ -1.66
SPE1	YKL184W	GIS4	Q04233	774 aa		4.68	□□□□□ -1.66
SPE1	YKL184W	NAR1	P23503	491 aa	Known RBP	4.67	□□□□□ -1.66
SPE1	YKL184W	IRS4	P36115	615 aa	Known RBP	4.67	□□□□□ -1.66
SPE1	YKL184W	TAT1	P38085	619 aa		4.67	□□□□□ -1.66
SPE1	YKL184W	PPT1	P53043	513 aa		4.67	□□□□□ -1.66
SPE1	YKL184W	UFD2	P54860	961 aa		4.67	□□□□□ -1.66
SPE1	YKL184W	EMG1	Q06287	252 aa	Known RBP	4.67	□□□□□ -1.66
SPE1	YKL184W	SLP1	Q12232	587 aa		4.67	□□□□□ -1.66
SPE1	YKL184W	RPB10	P22139	70 aa		4.66	□□□□□ -1.66
SPE1	YKL184W	RGD2	P43556	714 aa		4.66	□□□□□ -1.66
SPE1	YKL184W	ACF4	P47129	309 aa		4.66	□□□□□ -1.66
SPE1	YKL184W	ATG1	P53104	897 aa		4.66	□□□□□ -1.66
SPE1	YKL184W	SKN7	P38889	622 aa		4.65	□□□□□ -1.66
SPE1	YKL184W	PSY2	P40164	858 aa		4.65	□□□□□ -1.66
SPE1	YKL184W	HAT1	Q12341	374 aa		4.65	□□□□□ -1.66
SPE1	YKL184W	ECM2	P38241	364 aa	Known RBP	4.64	□□□□□ -1.67
SPE1	YKL184W	INP51	P40559	946 aa	Known RBP	4.64	□□□□□ -1.67
SPE1	YKL184W	LEM3	P42838	414 aa		4.64	□□□□□ -1.67
SPE1	YKL184W	TIF6	Q12522	245 aa	Known RBP	4.64	□□□□□ -1.67
SPE1	YKL184W	MRP10	O75012	95 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	RRM3	P38766	723 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	GIP2	P40036	548 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	SOK2	P53438	785 aa	Predicted RBP	4.63	□□□□□ -1.67
SPE1	YKL184W	SBP1	P10080	294 aa	Known RBP	4.63	□□□□□ -1.67
SPE1	YKL184W	GRS1	P38088	690 aa	Known RBP	4.63	□□□□□ -1.67
SPE1	YKL184W	PRY1	P47032	299 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	CCT8	P47079	568 aa	Known RBP	4.63	□□□□□ -1.67
SPE1	YKL184W	GUP1	P53154	560 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	YDR215C	Q12240	137 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	YBL113C	Q7M4S9	792 aa		4.63	□□□□□ -1.67
SPE1	YKL184W	FUS1	P11710	512 aa		4.62	□□□□□ -1.67
SPE1	YKL184W	KTR2	P33550	425 aa		4.62	□□□□□ -1.67
SPE1	YKL184W	SLN1	P39928	1220 aa	Predicted RBP	4.62	□□□□□ -1.67
SPE1	YKL184W	DSE4	P53753	1117 aa		4.62	□□□□□ -1.67
SPE1	YKL184W	TRS120	Q04183	1289 aa		4.62	□□□□□ -1.67
SPE1	YKL184W	TY4B-P	A0A0B7P3V8	1104 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 153 ms