RNA–Protein interactions for RNA: YKL148C

SDH1, Transcript of Flavoprotein subunit of succinate dehydrogenase, yeast

Gene SDH1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH1	YKL148C	OSH3	P38713	996 aa	Known RBP	13.93	□□□□□ -0.18
SDH1	YKL148C	PHM7	Q12252	991 aa		13.93	□□□□□ -0.18
SDH1	YKL148C	DCD1	P06773	312 aa		13.92	□□□□□ -0.18
SDH1	YKL148C	YHL017W	P38745	532 aa		13.92	□□□□□ -0.18
SDH1	YKL148C	TPM2	P40414	161 aa		13.92	□□□□□ -0.18
SDH1	YKL148C	ENV9	Q08651	330 aa		13.92	□□□□□ -0.18
SDH1	YKL148C	SNU66	Q12420	587 aa	Predicted RBP	13.92	□□□□□ -0.18
SDH1	YKL148C	DDP1	Q99321	188 aa	Known RBP	13.92	□□□□□ -0.18
SDH1	YKL148C	SGD1	Q06132	899 aa		13.92	□□□□□ -0.18
SDH1	YKL148C	ATE1	P16639	503 aa		13.91	□□□□□ -0.18
SDH1	YKL148C	SEC18	P18759	758 aa	Known RBP	13.91	□□□□□ -0.18
SDH1	YKL148C	TIM50	Q02776	476 aa		13.91	□□□□□ -0.18
SDH1	YKL148C	RPN7	Q06103	429 aa	Known RBP	13.91	□□□□□ -0.18
SDH1	YKL148C	SES1	P07284	462 aa	Known RBP	13.9	□□□□□ -0.18
SDH1	YKL148C	YKE2	P52553	114 aa		13.9	□□□□□ -0.18
SDH1	YKL148C	MAL33	P38157	468 aa		13.9	□□□□□ -0.18
SDH1	YKL148C	STU2	P46675	888 aa		13.9	□□□□□ -0.18
SDH1	YKL148C	UBP16	Q02863	499 aa		13.9	□□□□□ -0.18
SDH1	YKL148C	OPI1	P21957	404 aa		13.89	□□□□□ -0.19
SDH1	YKL148C	MATALPHA2	P0CY08	210 aa		13.88	□□□□□ -0.19
SDH1	YKL148C	HMLALPHA2	P0CY09	210 aa		13.88	□□□□□ -0.19
SDH1	YKL148C	YNL193W	P53870	558 aa		13.88	□□□□□ -0.19
SDH1	YKL148C	GRX1	P25373	110 aa	Known RBP	13.88	□□□□□ -0.19
SDH1	YKL148C	FBP26	P32604	452 aa		13.88	□□□□□ -0.19
SDH1	YKL148C	PEP3	P27801	918 aa		13.87	□□□□□ -0.19
SDH1	YKL148C	RFC5	P38251	354 aa		13.87	□□□□□ -0.19
SDH1	YKL148C	YGL082W	P53155	381 aa		13.87	□□□□□ -0.19
SDH1	YKL148C	HOS3	Q02959	697 aa	Known RBP	13.86	□□□□□ -0.19
SDH1	YKL148C	ESF1	Q06344	628 aa	Known RBP	13.86	□□□□□ -0.19
SDH1	YKL148C	GPA1	P08539	472 aa		13.86	□□□□□ -0.19
SDH1	YKL148C	BUD6	P41697	788 aa		13.86	□□□□□ -0.19
SDH1	YKL148C	IMP2'	P32351	346 aa		13.85	□□□□□ -0.19
SDH1	YKL148C	MFT1	P33441	392 aa	Known RBP	13.85	□□□□□ -0.19
SDH1	YKL148C	YER130C	P39959	443 aa		13.85	□□□□□ -0.19
SDH1	YKL148C	SAC3	P46674	1301 aa		13.84	□□□□□ -0.19
SDH1	YKL148C	COB	P00163	385 aa		13.84	□□□□□ -0.19
SDH1	YKL148C	YMR147W	P40218	223 aa	Known RBP	13.84	□□□□□ -0.19
SDH1	YKL148C	RPN1	P38764	993 aa	Known RBP	13.83	□□□□□ -0.2
SDH1	YKL148C	BBC1	P47068	1157 aa		13.83	□□□□□ -0.2
SDH1	YKL148C	YLR407W	Q06070	228 aa		13.83	□□□□□ -0.2
SDH1	YKL148C	LAM4	P38800	1345 aa		13.82	□□□□□ -0.2
SDH1	YKL148C	SER1	P33330	395 aa	Known RBP	13.82	□□□□□ -0.2
SDH1	YKL148C	RRM3	P38766	723 aa		13.82	□□□□□ -0.2
SDH1	YKL148C	VMS1	Q04311	632 aa	Known RBP	13.82	□□□□□ -0.2
SDH1	YKL148C	MNR2	P35724	969 aa		13.82	□□□□□ -0.2
SDH1	YKL148C	YPT11	P48559	417 aa		13.82	□□□□□ -0.2
SDH1	YKL148C	ECM23	Q02710	187 aa		13.82	□□□□□ -0.2
SDH1	YKL148C	SIS2	P36024	562 aa		13.81	□□□□□ -0.2
SDH1	YKL148C	APP1	P53933	587 aa		13.81	□□□□□ -0.2
SDH1	YKL148C	RRI2	Q12348	645 aa		13.81	□□□□□ -0.2
SDH1	YKL148C	PKH3	Q03306	898 aa	Predicted RBP	13.8	□□□□□ -0.2
SDH1	YKL148C	IMH1	Q06704	911 aa	Known RBP	13.8	□□□□□ -0.2
SDH1	YKL148C	ADR1	P07248	1323 aa		13.8	□□□□□ -0.2
SDH1	YKL148C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	13.79	□□□□□ -0.2	not detected
SDH1	YKL148C	FYV10	P40492	516 aa		13.78	□□□□□ -0.2
SDH1	YKL148C	FOX2	Q02207	900 aa	Known RBP	13.78	□□□□□ -0.2
SDH1	YKL148C	SSF2	Q12153	453 aa	Predicted RBP	13.78	□□□□□ -0.2
SDH1	YKL148C	DOT5	P40553	215 aa		13.78	□□□□□ -0.2
SDH1	YKL148C	EPL1	P43572	832 aa		13.78	□□□□□ -0.2
SDH1	YKL148C	UBP10	P53874	792 aa	Predicted RBP	13.78	□□□□□ -0.2
SDH1	YKL148C	PGI1	P12709	554 aa	Known RBP	13.77	□□□□□ -0.21
SDH1	YKL148C	RFT1	P38206	574 aa	Predicted RBP	13.77	□□□□□ -0.21
SDH1	YKL148C	GSY2	P27472	705 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	MET1	P36150	593 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	YKR075C	P36155	307 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	TCD1	P38756	429 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	TAH18	Q12181	623 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	SFI1	Q12369	946 aa		13.76	□□□□□ -0.21
SDH1	YKL148C	SRP40	P32583	406 aa	Predicted RBP	13.76	□□□□□ -0.21
SDH1	YKL148C	ENP2	P48234	707 aa	Known RBP	13.76	□□□□□ -0.21
SDH1	YKL148C	YKT6	P36015	200 aa	Known RBP	13.75	□□□□□ -0.21
SDH1	YKL148C	ISW2	Q08773	1120 aa		13.75	□□□□□ -0.21
SDH1	YKL148C	QCR6	P00127	147 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	HSP82	P02829	709 aa	Known RBP	13.74	□□□□□ -0.21
SDH1	YKL148C	PIF1	P07271	859 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	HAL5	P38970	855 aa	Known RBP	13.74	□□□□□ -0.21
SDH1	YKL148C	NOC2	P39744	710 aa	Known RBP	13.74	□□□□□ -0.21
SDH1	YKL148C	WAR1	Q03631	944 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	FAS2	P19097	1887 aa	Known RBP	13.74	□□□□□ -0.21
SDH1	YKL148C	POM152	P39685	1337 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	CEP3	P40969	608 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	TFG2	P41896	400 aa	Predicted RBP	13.74	□□□□□ -0.21
SDH1	YKL148C	TFC8	Q12308	588 aa		13.74	□□□□□ -0.21
SDH1	YKL148C	DIT2	P21595	489 aa		13.73	□□□□□ -0.21
SDH1	YKL148C	CRG1	P38892	291 aa	RIP-Chip data	13.73	□□□□□ -0.21	not detected
SDH1	YKL148C	ALD3	P54114	506 aa		13.73	□□□□□ -0.21
SDH1	YKL148C	SPN1	Q06505	410 aa	Predicted RBP	13.73	□□□□□ -0.21
SDH1	YKL148C	KAR5	Q04746	504 aa		13.72	□□□□□ -0.21
SDH1	YKL148C	HAT1	Q12341	374 aa		13.72	□□□□□ -0.21
SDH1	YKL148C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	13.72	□□□□□ -0.21	not detected
SDH1	YKL148C	CTH1	P47976	325 aa		13.72	□□□□□ -0.21
SDH1	YKL148C	NYV1	Q12255	253 aa		13.72	□□□□□ -0.21
SDH1	YKL148C	RGP1	P16664	663 aa		13.71	□□□□□ -0.21
SDH1	YKL148C	EST2	Q06163	884 aa		13.71	□□□□□ -0.21
SDH1	YKL148C	YAH1	Q12184	172 aa	Known RBP	13.71	□□□□□ -0.21
SDH1	YKL148C	HXK1	P04806	485 aa	Known RBP	13.7	□□□□□ -0.22
SDH1	YKL148C	LTV1	P34078	463 aa		13.7	□□□□□ -0.22
SDH1	YKL148C	MPH3	P0CE00	602 aa		13.7	□□□□□ -0.22
SDH1	YKL148C	MCM4	P30665	933 aa	Known RBP	13.7	□□□□□ -0.22
SDH1	YKL148C	RER2	P35196	286 aa		13.7	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms