RNA–Protein interactions for RNA: YKL027W

TCD2, Transcript of tRNA threonylcarbamoyladenosine dehydratase, yeastyeast

Gene TCD2, Length 1,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TCD2YKL027W GLO3P38682 493 aaKnown RBP13.97□□□□□ -0.17
TCD2YKL027W RAD50P12753 1312 aa13.96□□□□□ -0.17
TCD2YKL027W ALO1P54783 526 aaKnown RBP13.96□□□□□ -0.17
TCD2YKL027W HAL5P38970 855 aaKnown RBP13.95□□□□□ -0.18
TCD2YKL027W JJJ2P46997 583 aa13.94□□□□□ -0.18
TCD2YKL027W PRP42Q03776 544 aaKnown RBP13.94□□□□□ -0.18
TCD2YKL027W BRE1Q07457 700 aaKnown RBP13.94□□□□□ -0.18
TCD2YKL027W RRG1Q12167 365 aaPredicted RBP13.94□□□□□ -0.18
TCD2YKL027W MSM1P22438 575 aa13.93□□□□□ -0.18
TCD2YKL027W GAS5Q08193 484 aa13.93□□□□□ -0.18
TCD2YKL027W WRS1Q12109 432 aaKnown RBP13.92□□□□□ -0.18
TCD2YKL027W SLI15P38283 698 aa13.91□□□□□ -0.18
TCD2YKL027W YFH7P43591 353 aa13.91□□□□□ -0.18
TCD2YKL027W GSM1P42950 618 aa13.9□□□□□ -0.18
TCD2YKL027W CRF1Q04930 467 aa13.9□□□□□ -0.18
TCD2YKL027W INM2Q05533 292 aa13.9□□□□□ -0.18
TCD2YKL027W TOS4Q06266 489 aa13.9□□□□□ -0.18
TCD2YKL027W ARG82P07250 355 aa13.9□□□□□ -0.19
TCD2YKL027W AFG2P32794 780 aa13.9□□□□□ -0.19
TCD2YKL027W EPS1P40557 701 aa13.9□□□□□ -0.19
TCD2YKL027W YIR042CP40586 236 aa13.9□□□□□ -0.19
TCD2YKL027W MRPS35P53292 345 aa13.9□□□□□ -0.19
TCD2YKL027W CYB2P00175 591 aa13.89□□□□□ -0.19
TCD2YKL027W OSH3P38713 996 aaKnown RBP13.89□□□□□ -0.19
TCD2YKL027W RMD1Q03441 430 aa13.89□□□□□ -0.19
TCD2YKL027W RPT3P33298 428 aaKnown RBP13.88□□□□□ -0.19
TCD2YKL027W ACK1Q07622 623 aaPredicted RBP13.88□□□□□ -0.19
TCD2YKL027W KTR1P27810 393 aaKnown RBP13.87□□□□□ -0.19
TCD2YKL027W NPL4P33755 580 aa13.87□□□□□ -0.19
TCD2YKL027W GEF1P37020 779 aa13.87□□□□□ -0.19
TCD2YKL027W PBY1P38254 753 aa13.87□□□□□ -0.19
TCD2YKL027W VAS1P07806 1104 aaKnown RBP13.86□□□□□ -0.19
TCD2YKL027W GLC3P32775 704 aa13.86□□□□□ -0.19
TCD2YKL027W PTK1P36002 662 aaPredicted RBP13.86□□□□□ -0.19
TCD2YKL027W RTG2P32608 588 aaKnown RBP13.85□□□□□ -0.19
TCD2YKL027W TIM50Q02776 476 aa13.85□□□□□ -0.19
TCD2YKL027W RPS7AP26786 190 aaKnown RBP13.84□□□□□ -0.19
TCD2YKL027W ENP2P48234 707 aaKnown RBP13.84□□□□□ -0.19
TCD2YKL027W PIB2P53191 635 aa13.84□□□□□ -0.19
TCD2YKL027W YLR278CQ05854 1341 aa13.83□□□□□ -0.19
TCD2YKL027W FLO11P08640 1367 aa13.83□□□□□ -0.2
TCD2YKL027W RPC31P17890 251 aa13.83□□□□□ -0.2
TCD2YKL027W BOI1P38041 980 aaKnown RBP13.83□□□□□ -0.2
TCD2YKL027W TRM44Q02648 567 aaKnown RBP13.83□□□□□ -0.2
TCD2YKL027W THS1P04801 734 aaKnown RBP13.82□□□□□ -0.2
TCD2YKL027W SNF3P10870 884 aa13.82□□□□□ -0.2
TCD2YKL027W MDL2P33311 773 aa13.82□□□□□ -0.2
TCD2YKL027W GRX7P38068 203 aa13.82□□□□□ -0.2
TCD2YKL027W FET4P40988 552 aa13.82□□□□□ -0.2
TCD2YKL027W PUS6P53294 404 aa13.82□□□□□ -0.2
TCD2YKL027W SEN54Q02825 467 aaPredicted RBP13.82□□□□□ -0.2
TCD2YKL027W RIM20Q12033 661 aa13.82□□□□□ -0.2
TCD2YKL027W OPI1P21957 404 aa13.81□□□□□ -0.2
TCD2YKL027W STM1P39015 273 aaKnown RBP13.81□□□□□ -0.2
TCD2YKL027W YMR147WP40218 223 aaKnown RBP13.81□□□□□ -0.2
TCD2YKL027W NOP2P40991 618 aaKnown RBP13.81□□□□□ -0.2
TCD2YKL027W IOC3P43596 787 aa13.81□□□□□ -0.2
TCD2YKL027W APL6P46682 809 aa13.81□□□□□ -0.2
TCD2YKL027W GCR2Q01722 534 aa13.81□□□□□ -0.2
TCD2YKL027W BRN1P38170 754 aa13.8□□□□□ -0.2
TCD2YKL027W IRC8P47046 822 aa13.8□□□□□ -0.2
TCD2YKL027W BBC1P47068 1157 aa13.8□□□□□ -0.2
TCD2YKL027W YGR117CP53270 476 aa13.8□□□□□ -0.2
TCD2YKL027W GAP1P19145 602 aaPredicted RBP13.79□□□□□ -0.2
TCD2YKL027W VPS4P52917 437 aa13.79□□□□□ -0.2
TCD2YKL027W FPR4Q06205 392 aaPredicted RBP13.79□□□□□ -0.2
TCD2YKL027W AAP1P37898 856 aaKnown RBP13.78□□□□□ -0.2
TCD2YKL027W KAR5Q04746 504 aa13.78□□□□□ -0.2
TCD2YKL027W TAH18Q12181 623 aa13.78□□□□□ -0.2
TCD2YKL027W STV1P37296 890 aa13.77□□□□□ -0.21
TCD2YKL027W PIP2P52960 996 aa13.77□□□□□ -0.21
TCD2YKL027W PKH3Q03306 898 aaPredicted RBP13.77□□□□□ -0.21
TCD2YKL027W AIM7Q12156 149 aa13.77□□□□□ -0.21
TCD2YKL027W HPR1P17629 752 aaKnown RBP13.76□□□□□ -0.21
TCD2YKL027W YJL171CP46992 396 aa13.76□□□□□ -0.21
TCD2YKL027W PUS5Q06244 254 aa13.76□□□□□ -0.21
TCD2YKL027W EMP47P43555 445 aa13.75□□□□□ -0.21
TCD2YKL027W PEX21P50091 288 aa13.75□□□□□ -0.21
TCD2YKL027W LAM4P38800 1345 aa13.75□□□□□ -0.21
TCD2YKL027W TPM1P17536 199 aaKnown RBP13.74□□□□□ -0.21
TCD2YKL027W FLO1P32768 1537 aa13.74□□□□□ -0.21
TCD2YKL027W DLD1P32891 587 aa13.74□□□□□ -0.21
TCD2YKL027W UTP7P40055 554 aaKnown RBP13.74□□□□□ -0.21
TCD2YKL027W AAD16Q02895 342 aa13.74□□□□□ -0.21
TCD2YKL027W MET1P36150 593 aa13.73□□□□□ -0.21
TCD2YKL027W MTC3P53077 123 aa13.73□□□□□ -0.21
TCD2YKL027W HXT13P39924 564 aa13.7□□□□□ -0.22
TCD2YKL027W HXT17P53631 564 aa13.7□□□□□ -0.22
TCD2YKL027W SSF2Q12153 453 aaPredicted RBP13.7□□□□□ -0.22
TCD2YKL027W GSC2P40989 1895 aa13.7□□□□□ -0.22
TCD2YKL027W CBP1P07252 654 aa13.69□□□□□ -0.22
TCD2YKL027W RRP8P38961 392 aaKnown RBP13.69□□□□□ -0.22
TCD2YKL027W MSH4P40965 878 aaPredicted RBP13.69□□□□□ -0.22
TCD2YKL027W NSG2P53898 299 aa13.69□□□□□ -0.22
TCD2YKL027W PPM2Q08282 695 aa13.69□□□□□ -0.22
TCD2YKL027W SSA4P22202 642 aaKnown RBP13.68□□□□□ -0.22
TCD2YKL027W SKI2P35207 1287 aaKnown RBP RIP-Chip data13.68□□□□□ -0.22not detected
TCD2YKL027W SLN1P39928 1220 aaPredicted RBP13.68□□□□□ -0.22
TCD2YKL027W PEA2P40091 420 aa13.68□□□□□ -0.22
TCD2YKL027W PCL8Q08966 492 aa13.68□□□□□ -0.22
Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms