RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	ALD4	P46367	519 aa	Known RBP	6.32	□□□□□ -1.4
SWD2	YKL018W	NCL1	P38205	684 aa	Known RBP	6.31	□□□□□ -1.4
SWD2	YKL018W	QDR2	P40474	542 aa		6.31	□□□□□ -1.4
SWD2	YKL018W	YNR014W	P53719	212 aa		6.31	□□□□□ -1.4
SWD2	YKL018W	SRS2	P12954	1174 aa		6.3	□□□□□ -1.4
SWD2	YKL018W	SUV3	P32580	737 aa		6.3	□□□□□ -1.4
SWD2	YKL018W	RPL34A	P87262	121 aa	Predicted RBP	6.3	□□□□□ -1.4
SWD2	YKL018W	CAB1	Q04430	367 aa		6.3	□□□□□ -1.4
SWD2	YKL018W	SUB2	Q07478	446 aa	Known RBP	6.3	□□□□□ -1.4
SWD2	YKL018W	GPM1	P00950	247 aa	Known RBP	6.29	□□□□□ -1.4
SWD2	YKL018W	YBR197C	P38306	217 aa		6.29	□□□□□ -1.4
SWD2	YKL018W	DYS1	P38791	387 aa		6.29	□□□□□ -1.4
SWD2	YKL018W	CUS1	Q02554	436 aa	Predicted RBP	6.29	□□□□□ -1.4
SWD2	YKL018W	HEH2	Q03281	663 aa		6.29	□□□□□ -1.4
SWD2	YKL018W	TY1A-DR2	Q03964	440 aa	Known RBP	6.29	□□□□□ -1.4
SWD2	YKL018W	MRPL33	P20084	86 aa		6.28	□□□□□ -1.4
SWD2	YKL018W	ISC10	P32645	267 aa		6.28	□□□□□ -1.4
SWD2	YKL018W	RRN6	P32786	894 aa		6.28	□□□□□ -1.4
SWD2	YKL018W	MET1	P36150	593 aa		6.28	□□□□□ -1.4
SWD2	YKL018W	VMA3	P25515	160 aa		6.27	□□□□□ -1.41
SWD2	YKL018W	LDH1	P38139	375 aa		6.27	□□□□□ -1.41
SWD2	YKL018W	MCX1	P38323	520 aa	Predicted RBP	6.27	□□□□□ -1.41
SWD2	YKL018W	APM2	P38700	605 aa		6.27	□□□□□ -1.41
SWD2	YKL018W	KNS1	P32350	737 aa	Predicted RBP	6.26	□□□□□ -1.41
SWD2	YKL018W	BOI2	P39969	1040 aa		6.26	□□□□□ -1.41
SWD2	YKL018W	SKP1	P52286	194 aa		6.26	□□□□□ -1.41
SWD2	YKL018W	PNP1	Q05788	311 aa		6.26	□□□□□ -1.41
SWD2	YKL018W	PDC5	P16467	563 aa	Known RBP	6.25	□□□□□ -1.41
SWD2	YKL018W	CWC15	Q03772	175 aa	Known RBP	6.25	□□□□□ -1.41
SWD2	YKL018W	RPC31	P17890	251 aa		6.24	□□□□□ -1.41
SWD2	YKL018W	MAC1	P35192	417 aa		6.24	□□□□□ -1.41
SWD2	YKL018W	MSC7	P38694	644 aa		6.24	□□□□□ -1.41
SWD2	YKL018W	IRC24	P40580	263 aa		6.24	□□□□□ -1.41
SWD2	YKL018W	FUR4	P05316	633 aa	Known RBP	6.23	□□□□□ -1.41
SWD2	YKL018W	YCK2	P23292	546 aa	Known RBP	6.23	□□□□□ -1.41
SWD2	YKL018W	AMN1	P38285	549 aa	Predicted RBP	6.23	□□□□□ -1.41
SWD2	YKL018W	YBR287W	P38355	427 aa		6.23	□□□□□ -1.41
SWD2	YKL018W	GLT1	Q12680	2145 aa	Known RBP	6.23	□□□□□ -1.41
SWD2	YKL018W	GIP1	P38229	639 aa		6.22	□□□□□ -1.41
SWD2	YKL018W	FIR1	P40020	876 aa		6.22	□□□□□ -1.41
SWD2	YKL018W	ISW1	P38144	1129 aa		6.21	□□□□□ -1.42
SWD2	YKL018W	YNR040W	P53736	256 aa		6.21	□□□□□ -1.42
SWD2	YKL018W	YOR296W	Q08748	1289 aa		6.21	□□□□□ -1.42
SWD2	YKL018W	YDR215C	Q12240	137 aa		6.2	□□□□□ -1.42
SWD2	YKL018W	SSA1	P10591	642 aa	Known RBP	6.19	□□□□□ -1.42
SWD2	YKL018W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
SWD2	YKL018W	ALG14	P38242	237 aa		6.19	□□□□□ -1.42
SWD2	YKL018W	BSD2	P38356	321 aa		6.19	□□□□□ -1.42
SWD2	YKL018W	PRK1	P40494	810 aa		6.19	□□□□□ -1.42
SWD2	YKL018W	TPS3	P38426	1054 aa	Known RBP	6.18	□□□□□ -1.42
SWD2	YKL018W	HXT8	P40886	569 aa		6.18	□□□□□ -1.42
SWD2	YKL018W	SUT1	P53032	299 aa	Known RBP	6.18	□□□□□ -1.42
SWD2	YKL018W	ITC1	P53125	1264 aa		6.18	□□□□□ -1.42
SWD2	YKL018W	NHA1	Q99271	985 aa		6.18	□□□□□ -1.42
SWD2	YKL018W	PGM2	P37012	569 aa	Known RBP	6.17	□□□□□ -1.42
SWD2	YKL018W	RSC2	Q06488	889 aa		6.17	□□□□□ -1.42
SWD2	YKL018W	MSN1	P22148	382 aa		6.16	□□□□□ -1.42
SWD2	YKL018W	LSB6	P42951	607 aa		6.16	□□□□□ -1.42
SWD2	YKL018W	KAR5	Q04746	504 aa		6.16	□□□□□ -1.42
SWD2	YKL018W	IDI1	P15496	288 aa		6.15	□□□□□ -1.42
SWD2	YKL018W	YPL034W	Q03083	165 aa		6.15	□□□□□ -1.42
SWD2	YKL018W	TAT1	P38085	619 aa		6.14	□□□□□ -1.43
SWD2	YKL018W	SLN1	P39928	1220 aa	Predicted RBP	6.14	□□□□□ -1.43
SWD2	YKL018W	YER156C	P40093	338 aa	Known RBP	6.14	□□□□□ -1.43
SWD2	YKL018W	MCA1	Q08601	432 aa		6.14	□□□□□ -1.43
SWD2	YKL018W	YJL181W	P46987	611 aa		6.13	□□□□□ -1.43
SWD2	YKL018W	LSO1	Q3E827	93 aa		6.13	□□□□□ -1.43
SWD2	YKL018W	NAR1	P23503	491 aa	Known RBP	6.12	□□□□□ -1.43
SWD2	YKL018W	AIM46	P38885	310 aa		6.12	□□□□□ -1.43
SWD2	YKL018W	YIL165C	P40446	119 aa		6.12	□□□□□ -1.43
SWD2	YKL018W	PPT1	P53043	513 aa		6.12	□□□□□ -1.43
SWD2	YKL018W	GIS4	Q04233	774 aa		6.12	□□□□□ -1.43
SWD2	YKL018W	RPB10	P22139	70 aa		6.11	□□□□□ -1.43
SWD2	YKL018W	SMC1	P32908	1225 aa		6.11	□□□□□ -1.43
SWD2	YKL018W	BOI1	P38041	980 aa	Known RBP	6.11	□□□□□ -1.43
SWD2	YKL018W	GLO3	P38682	493 aa	Known RBP	6.11	□□□□□ -1.43
SWD2	YKL018W	RAD55	P38953	406 aa		6.11	□□□□□ -1.43
SWD2	YKL018W	BOL3	P39724	118 aa		6.11	□□□□□ -1.43
SWD2	YKL018W	CDC3	P32457	520 aa	Known RBP	6.09	□□□□□ -1.43
SWD2	YKL018W	GEF1	P37020	779 aa		6.09	□□□□□ -1.43
SWD2	YKL018W	APC11	Q12157	165 aa		6.09	□□□□□ -1.43
SWD2	YKL018W	MRP10	O75012	95 aa		6.08	□□□□□ -1.44
SWD2	YKL018W	NTA1	P40354	457 aa		6.08	□□□□□ -1.44
SWD2	YKL018W	PRY1	P47032	299 aa		6.08	□□□□□ -1.44
SWD2	YKL018W	EMG1	Q06287	252 aa	Known RBP	6.08	□□□□□ -1.44
SWD2	YKL018W	RRM3	P38766	723 aa		6.07	□□□□□ -1.44
SWD2	YKL018W	QDR1	P40475	563 aa		6.07	□□□□□ -1.44
SWD2	YKL018W	RGD2	P43556	714 aa		6.07	□□□□□ -1.44
SWD2	YKL018W	SLP1	Q12232	587 aa		6.07	□□□□□ -1.44
SWD2	YKL018W	IRS4	P36115	615 aa	Known RBP	6.06	□□□□□ -1.44
SWD2	YKL018W	SOK2	P53438	785 aa	Predicted RBP	6.06	□□□□□ -1.44
SWD2	YKL018W	GIP2	P40036	548 aa		6.05	□□□□□ -1.44
SWD2	YKL018W	PSY2	P40164	858 aa		6.05	□□□□□ -1.44
SWD2	YKL018W	INP51	P40559	946 aa	Known RBP	6.05	□□□□□ -1.44
SWD2	YKL018W	TIF6	Q12522	245 aa	Known RBP	6.05	□□□□□ -1.44
SWD2	YKL018W	TED1	P40533	473 aa		6.04	□□□□□ -1.44
SWD2	YKL018W	ATG1	P53104	897 aa		6.04	□□□□□ -1.44
SWD2	YKL018W	ALO1	P54783	526 aa	Known RBP	6.04	□□□□□ -1.44
SWD2	YKL018W	UFD2	P54860	961 aa		6.04	□□□□□ -1.44
SWD2	YKL018W	KTR2	P33550	425 aa		6.03	□□□□□ -1.44

Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms