RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W ALD4P46367 519 aaKnown RBP6.32□□□□□ -1.4
SWD2YKL018W NCL1P38205 684 aaKnown RBP6.31□□□□□ -1.4
SWD2YKL018W QDR2P40474 542 aa6.31□□□□□ -1.4
SWD2YKL018W YNR014WP53719 212 aa6.31□□□□□ -1.4
SWD2YKL018W SRS2P12954 1174 aa6.3□□□□□ -1.4
SWD2YKL018W SUV3P32580 737 aa6.3□□□□□ -1.4
SWD2YKL018W RPL34AP87262 121 aaPredicted RBP6.3□□□□□ -1.4
SWD2YKL018W CAB1Q04430 367 aa6.3□□□□□ -1.4
SWD2YKL018W SUB2Q07478 446 aaKnown RBP6.3□□□□□ -1.4
SWD2YKL018W GPM1P00950 247 aaKnown RBP6.29□□□□□ -1.4
SWD2YKL018W YBR197CP38306 217 aa6.29□□□□□ -1.4
SWD2YKL018W DYS1P38791 387 aa6.29□□□□□ -1.4
SWD2YKL018W CUS1Q02554 436 aaPredicted RBP6.29□□□□□ -1.4
SWD2YKL018W HEH2Q03281 663 aa6.29□□□□□ -1.4
SWD2YKL018W TY1A-DR2Q03964 440 aaKnown RBP6.29□□□□□ -1.4
SWD2YKL018W MRPL33P20084 86 aa6.28□□□□□ -1.4
SWD2YKL018W ISC10P32645 267 aa6.28□□□□□ -1.4
SWD2YKL018W RRN6P32786 894 aa6.28□□□□□ -1.4
SWD2YKL018W MET1P36150 593 aa6.28□□□□□ -1.4
SWD2YKL018W VMA3P25515 160 aa6.27□□□□□ -1.41
SWD2YKL018W LDH1P38139 375 aa6.27□□□□□ -1.41
SWD2YKL018W MCX1P38323 520 aaPredicted RBP6.27□□□□□ -1.41
SWD2YKL018W APM2P38700 605 aa6.27□□□□□ -1.41
SWD2YKL018W KNS1P32350 737 aaPredicted RBP6.26□□□□□ -1.41
SWD2YKL018W BOI2P39969 1040 aa6.26□□□□□ -1.41
SWD2YKL018W SKP1P52286 194 aa6.26□□□□□ -1.41
SWD2YKL018W PNP1Q05788 311 aa6.26□□□□□ -1.41
SWD2YKL018W PDC5P16467 563 aaKnown RBP6.25□□□□□ -1.41
SWD2YKL018W CWC15Q03772 175 aaKnown RBP6.25□□□□□ -1.41
SWD2YKL018W RPC31P17890 251 aa6.24□□□□□ -1.41
SWD2YKL018W MAC1P35192 417 aa6.24□□□□□ -1.41
SWD2YKL018W MSC7P38694 644 aa6.24□□□□□ -1.41
SWD2YKL018W IRC24P40580 263 aa6.24□□□□□ -1.41
SWD2YKL018W FUR4P05316 633 aaKnown RBP6.23□□□□□ -1.41
SWD2YKL018W YCK2P23292 546 aaKnown RBP6.23□□□□□ -1.41
SWD2YKL018W AMN1P38285 549 aaPredicted RBP6.23□□□□□ -1.41
SWD2YKL018W YBR287WP38355 427 aa6.23□□□□□ -1.41
SWD2YKL018W GLT1Q12680 2145 aaKnown RBP6.23□□□□□ -1.41
SWD2YKL018W GIP1P38229 639 aa6.22□□□□□ -1.41
SWD2YKL018W FIR1P40020 876 aa6.22□□□□□ -1.41
SWD2YKL018W ISW1P38144 1129 aa6.21□□□□□ -1.42
SWD2YKL018W YNR040WP53736 256 aa6.21□□□□□ -1.42
SWD2YKL018W YOR296WQ08748 1289 aa6.21□□□□□ -1.42
SWD2YKL018W YDR215CQ12240 137 aa6.2□□□□□ -1.42
SWD2YKL018W SSA1P10591 642 aaKnown RBP6.19□□□□□ -1.42
SWD2YKL018W NAB2P32505 525 aaKnown RBP RIP-Chip data6.19□□□□□ -1.42not detected
SWD2YKL018W ALG14P38242 237 aa6.19□□□□□ -1.42
SWD2YKL018W BSD2P38356 321 aa6.19□□□□□ -1.42
SWD2YKL018W PRK1P40494 810 aa6.19□□□□□ -1.42
SWD2YKL018W TPS3P38426 1054 aaKnown RBP6.18□□□□□ -1.42
SWD2YKL018W HXT8P40886 569 aa6.18□□□□□ -1.42
SWD2YKL018W SUT1P53032 299 aaKnown RBP6.18□□□□□ -1.42
SWD2YKL018W ITC1P53125 1264 aa6.18□□□□□ -1.42
SWD2YKL018W NHA1Q99271 985 aa6.18□□□□□ -1.42
SWD2YKL018W PGM2P37012 569 aaKnown RBP6.17□□□□□ -1.42
SWD2YKL018W RSC2Q06488 889 aa6.17□□□□□ -1.42
SWD2YKL018W MSN1P22148 382 aa6.16□□□□□ -1.42
SWD2YKL018W LSB6P42951 607 aa6.16□□□□□ -1.42
SWD2YKL018W KAR5Q04746 504 aa6.16□□□□□ -1.42
SWD2YKL018W IDI1P15496 288 aa6.15□□□□□ -1.42
SWD2YKL018W YPL034WQ03083 165 aa6.15□□□□□ -1.42
SWD2YKL018W TAT1P38085 619 aa6.14□□□□□ -1.43
SWD2YKL018W SLN1P39928 1220 aaPredicted RBP6.14□□□□□ -1.43
SWD2YKL018W YER156CP40093 338 aaKnown RBP6.14□□□□□ -1.43
SWD2YKL018W MCA1Q08601 432 aa6.14□□□□□ -1.43
SWD2YKL018W YJL181WP46987 611 aa6.13□□□□□ -1.43
SWD2YKL018W LSO1Q3E827 93 aa6.13□□□□□ -1.43
SWD2YKL018W NAR1P23503 491 aaKnown RBP6.12□□□□□ -1.43
SWD2YKL018W AIM46P38885 310 aa6.12□□□□□ -1.43
SWD2YKL018W YIL165CP40446 119 aa6.12□□□□□ -1.43
SWD2YKL018W PPT1P53043 513 aa6.12□□□□□ -1.43
SWD2YKL018W GIS4Q04233 774 aa6.12□□□□□ -1.43
SWD2YKL018W RPB10P22139 70 aa6.11□□□□□ -1.43
SWD2YKL018W SMC1P32908 1225 aa6.11□□□□□ -1.43
SWD2YKL018W BOI1P38041 980 aaKnown RBP6.11□□□□□ -1.43
SWD2YKL018W GLO3P38682 493 aaKnown RBP6.11□□□□□ -1.43
SWD2YKL018W RAD55P38953 406 aa6.11□□□□□ -1.43
SWD2YKL018W BOL3P39724 118 aa6.11□□□□□ -1.43
SWD2YKL018W CDC3P32457 520 aaKnown RBP6.09□□□□□ -1.43
SWD2YKL018W GEF1P37020 779 aa6.09□□□□□ -1.43
SWD2YKL018W APC11Q12157 165 aa6.09□□□□□ -1.43
SWD2YKL018W MRP10O75012 95 aa6.08□□□□□ -1.44
SWD2YKL018W NTA1P40354 457 aa6.08□□□□□ -1.44
SWD2YKL018W PRY1P47032 299 aa6.08□□□□□ -1.44
SWD2YKL018W EMG1Q06287 252 aaKnown RBP6.08□□□□□ -1.44
SWD2YKL018W RRM3P38766 723 aa6.07□□□□□ -1.44
SWD2YKL018W QDR1P40475 563 aa6.07□□□□□ -1.44
SWD2YKL018W RGD2P43556 714 aa6.07□□□□□ -1.44
SWD2YKL018W SLP1Q12232 587 aa6.07□□□□□ -1.44
SWD2YKL018W IRS4P36115 615 aaKnown RBP6.06□□□□□ -1.44
SWD2YKL018W SOK2P53438 785 aaPredicted RBP6.06□□□□□ -1.44
SWD2YKL018W GIP2P40036 548 aa6.05□□□□□ -1.44
SWD2YKL018W PSY2P40164 858 aa6.05□□□□□ -1.44
SWD2YKL018W INP51P40559 946 aaKnown RBP6.05□□□□□ -1.44
SWD2YKL018W TIF6Q12522 245 aaKnown RBP6.05□□□□□ -1.44
SWD2YKL018W TED1P40533 473 aa6.04□□□□□ -1.44
SWD2YKL018W ATG1P53104 897 aa6.04□□□□□ -1.44
SWD2YKL018W ALO1P54783 526 aaKnown RBP6.04□□□□□ -1.44
SWD2YKL018W UFD2P54860 961 aa6.04□□□□□ -1.44
SWD2YKL018W KTR2P33550 425 aa6.03□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms