RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W NUP188P52593 1655 aaKnown RBP7.53□□□□□ -1.2
RPB4YJL140W ACO2P39533 789 aa7.52□□□□□ -1.21
RPB4YJL140W APL6P46682 809 aa7.52□□□□□ -1.21
RPB4YJL140W SCW11P53189 542 aa7.52□□□□□ -1.21
RPB4YJL140W UBP2Q01476 1272 aa7.52□□□□□ -1.21
RPB4YJL140W ISU1Q03020 165 aa7.52□□□□□ -1.21
RPB4YJL140W VMR1P38735 1592 aa7.51□□□□□ -1.21
RPB4YJL140W YNL108CP53929 270 aa7.51□□□□□ -1.21
RPB4YJL140W UTP13Q05946 817 aaKnown RBP7.51□□□□□ -1.21
RPB4YJL140W BUD21Q08492 214 aaPredicted RBP7.51□□□□□ -1.21
RPB4YJL140W ISF1P32488 338 aa7.5□□□□□ -1.21
RPB4YJL140W DLD1P32891 587 aa7.49□□□□□ -1.21
RPB4YJL140W TYS1P36421 394 aaKnown RBP7.48□□□□□ -1.21
RPB4YJL140W YJR098CP47139 656 aa7.48□□□□□ -1.21
RPB4YJL140W ENO2P00925 437 aaKnown RBP7.47□□□□□ -1.21
RPB4YJL140W BIM1P40013 344 aa7.47□□□□□ -1.21
RPB4YJL140W ISR1Q06098 443 aaKnown RBP7.47□□□□□ -1.21
RPB4YJL140W TY1A-BLQ12266 440 aa7.47□□□□□ -1.21
RPB4YJL140W DLD3P39976 496 aaKnown RBP7.46□□□□□ -1.22
RPB4YJL140W RPL34BP40525 121 aaKnown RBP7.46□□□□□ -1.22
RPB4YJL140W YIR007WP40566 764 aa7.45□□□□□ -1.22
RPB4YJL140W RIM21P48565 533 aa7.45□□□□□ -1.22
RPB4YJL140W SPT2P06843 333 aaPredicted RBP7.44□□□□□ -1.22
RPB4YJL140W TCB1Q12466 1186 aa7.44□□□□□ -1.22
RPB4YJL140W TIF1P10081 395 aaKnown RBP7.43□□□□□ -1.22
RPB4YJL140W ATG32P40458 529 aa7.43□□□□□ -1.22
RPB4YJL140W VTC4P47075 721 aa7.43□□□□□ -1.22
RPB4YJL140W UTR2P32623 467 aa7.42□□□□□ -1.22
RPB4YJL140W SOH1P38633 127 aa7.42□□□□□ -1.22
RPB4YJL140W PDR5P33302 1511 aaKnown RBP7.42□□□□□ -1.22
RPB4YJL140W RTG2P32608 588 aaKnown RBP7.41□□□□□ -1.22
RPB4YJL140W TBS1P38114 1094 aa7.41□□□□□ -1.22
RPB4YJL140W DAT1P13483 248 aaKnown RBP7.4□□□□□ -1.22
RPB4YJL140W YGR035CP53222 116 aa7.4□□□□□ -1.22
RPB4YJL140W OSH7P38755 437 aa7.39□□□□□ -1.23
RPB4YJL140W HAL5P38970 855 aaKnown RBP7.39□□□□□ -1.23
RPB4YJL140W MRX10Q05648 414 aa7.39□□□□□ -1.23
RPB4YJL140W WTM2Q12206 467 aa7.39□□□□□ -1.23
RPB4YJL140W DAL1P32375 460 aa7.38□□□□□ -1.23
RPB4YJL140W DMA2P53924 522 aa7.38□□□□□ -1.23
RPB4YJL140W HPF1Q05164 967 aa7.37□□□□□ -1.23
RPB4YJL140W HDA3Q06623 655 aa7.37□□□□□ -1.23
RPB4YJL140W ENO1P00924 437 aaKnown RBP7.36□□□□□ -1.23
RPB4YJL140W RDS2P19541 446 aaKnown RBP7.36□□□□□ -1.23
RPB4YJL140W TRK2P28584 889 aa7.36□□□□□ -1.23
RPB4YJL140W MSN5P52918 1224 aa7.36□□□□□ -1.23
RPB4YJL140W SIS2P36024 562 aa7.35□□□□□ -1.23
RPB4YJL140W YFL034WP43564 1073 aa7.35□□□□□ -1.23
RPB4YJL140W IKI3Q06706 1349 aaKnown RBP7.34□□□□□ -1.23
RPB4YJL140W SLX8P40072 274 aa7.34□□□□□ -1.23
RPB4YJL140W ROG3P43602 733 aa7.34□□□□□ -1.23
RPB4YJL140W KRE5P22023 1365 aa7.33□□□□□ -1.24
RPB4YJL140W TY1A-MR1Q04215 440 aa7.33□□□□□ -1.24
RPB4YJL140W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
RPB4YJL140W SSN3P39073 555 aa7.32□□□□□ -1.24
RPB4YJL140W SUM1P46676 1062 aa7.32□□□□□ -1.24
RPB4YJL140W RIA1P53893 1110 aa7.32□□□□□ -1.24
RPB4YJL140W SSM4P40318 1319 aa7.31□□□□□ -1.24
RPB4YJL140W CDC19P00549 500 aaKnown RBP7.31□□□□□ -1.24
RPB4YJL140W YPR204WQ08995 1032 aa7.31□□□□□ -1.24
RPB4YJL140W CFT1Q06632 1357 aaKnown RBP7.31□□□□□ -1.24
RPB4YJL140W PEP12P32854 288 aa7.3□□□□□ -1.24
RPB4YJL140W AIM9P40053 627 aaKnown RBP7.3□□□□□ -1.24
RPB4YJL140W AHP1P38013 176 aaKnown RBP7.29□□□□□ -1.24
RPB4YJL140W UBP15P50101 1230 aa7.29□□□□□ -1.24
RPB4YJL140W TSC13Q99190 310 aa7.29□□□□□ -1.24
RPB4YJL140W BCK1Q01389 1478 aa7.29□□□□□ -1.24
RPB4YJL140W UTP7P40055 554 aaKnown RBP7.28□□□□□ -1.24
RPB4YJL140W ALA1P40825 983 aaKnown RBP7.28□□□□□ -1.24
RPB4YJL140W YNR029CP53729 429 aaKnown RBP7.28□□□□□ -1.24
RPB4YJL140W PDR11P40550 1411 aa7.27□□□□□ -1.24
RPB4YJL140W SLA1P32790 1244 aa7.27□□□□□ -1.25
RPB4YJL140W CCP1P00431 361 aa7.26□□□□□ -1.25
RPB4YJL140W SWI5P08153 709 aa7.26□□□□□ -1.25
RPB4YJL140W LYS5P50113 272 aa7.26□□□□□ -1.25
RPB4YJL140W DPH6Q12429 685 aa7.26□□□□□ -1.25
RPB4YJL140W NAM8Q00539 523 aaKnown RBP7.25□□□□□ -1.25
RPB4YJL140W RPS6AP0CX37 236 aaKnown RBP7.24□□□□□ -1.25
RPB4YJL140W RPS6BP0CX38 236 aaPredicted RBP7.24□□□□□ -1.25
RPB4YJL140W YMR074CQ04773 145 aa7.24□□□□□ -1.25
RPB4YJL140W GCN2P15442 1659 aa7.23□□□□□ -1.25
RPB4YJL140W HAP4P14064 554 aa7.23□□□□□ -1.25
RPB4YJL140W PDI1P17967 522 aaKnown RBP7.23□□□□□ -1.25
RPB4YJL140W NTH2P35172 780 aa7.23□□□□□ -1.25
RPB4YJL140W JJJ2P46997 583 aa7.23□□□□□ -1.25
RPB4YJL140W YPQ2Q06328 317 aa7.23□□□□□ -1.25
RPB4YJL140W MCM1P11746 286 aa7.22□□□□□ -1.25
RPB4YJL140W PHO87P25360 923 aa7.22□□□□□ -1.25
RPB4YJL140W IRE1P32361 1115 aa7.21□□□□□ -1.26
RPB4YJL140W CUZ1P53899 274 aa7.21□□□□□ -1.26
RPB4YJL140W MTC5Q03897 1148 aa7.21□□□□□ -1.26
RPB4YJL140W TY1A-DR3Q12441 440 aa7.21□□□□□ -1.26
RPB4YJL140W ENT1Q12518 454 aa7.21□□□□□ -1.26
RPB4YJL140W NUP192P47054 1683 aa7.2□□□□□ -1.26
RPB4YJL140W GAS4Q08271 471 aa7.2□□□□□ -1.26
RPB4YJL140W DIT1P21623 536 aa7.19□□□□□ -1.26
RPB4YJL140W TTI1P36097 1038 aa7.19□□□□□ -1.26
RPB4YJL140W KTR7P40504 517 aa7.19□□□□□ -1.26
RPB4YJL140W CAB1Q04430 367 aa7.19□□□□□ -1.26
RPB4YJL140W CYT1P07143 309 aa7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms