RNA–Protein interactions for RNA: YIL009W

FAA3, Transcript of Long chain fatty acyl-CoA synthetase, yeast

Gene FAA3, Length 2,085 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FAA3	YIL009W	VPS29	P38759	282 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	PXA1	P41909	870 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	PEX21	P50091	288 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	KAR5	Q04746	504 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	ATG26	Q06321	1198 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	SPT6	P23615	1451 aa	Known RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	GRX4	P32642	244 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	EFM2	P38347	419 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	APE4	P38821	490 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	DOT6	P40059	670 aa	Known RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	PXR1	P53335	271 aa	Predicted RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	ALG12	P53730	551 aa		5.32	□□□□□ -1.56
FAA3	YIL009W	YMR111C	Q04461	462 aa	Predicted RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	UTP4	Q06679	776 aa	Known RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	NOC3	Q07896	663 aa	Predicted RBP	5.32	□□□□□ -1.56
FAA3	YIL009W	INH1	P01097	85 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	PRT1	P06103	763 aa	Known RBP	5.31	□□□□□ -1.56
FAA3	YIL009W	BUD14	P27637	709 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	CCL1	P37366	393 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	LAM1	P38851	1228 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	ENP2	P48234	707 aa	Known RBP	5.31	□□□□□ -1.56
FAA3	YIL009W	PMT7	Q06644	662 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	RTP1	Q12751	981 aa		5.31	□□□□□ -1.56
FAA3	YIL009W	XRN1	P22147	1528 aa	Known RBP	5.31	□□□□□ -1.56
FAA3	YIL009W	HNM1	P19807	563 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	SUI2	P20459	304 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	TPD3	P31383	635 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YKL100C	P34248	587 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ATG19	P35193	415 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ESL2	P36168	1195 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	RXT2	P38255	430 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	HOP2	P53187	214 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ATF2	P53296	535 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YNL050C	P53952	270 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YML119W	Q03208	357 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	HEH2	Q03281	663 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ATG38	Q05789	226 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	YLR352W	Q06479	807 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YLH47	Q06493	454 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ENT1	Q12518	454 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YGR161W-C	Q3E744	92 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	DPS1	P04802	557 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	MRPL25	P23369	157 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
FAA3	YIL009W	TIF3	P34167	436 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	MIF2	P35201	549 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	CAJ1	P39101	391 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.3	□□□□□ -1.56	not detected
FAA3	YIL009W	NUP42	P49686	430 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	SVL3	Q03088	825 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	SPC19	Q03954	165 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	ORM2	Q06144	216 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	DBP9	Q06218	594 aa	Known RBP	5.3	□□□□□ -1.56
FAA3	YIL009W	ARV1	Q06541	321 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	IRC3	Q06683	689 aa		5.3	□□□□□ -1.56
FAA3	YIL009W	HOM3	P10869	527 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	MCM3	P24279	971 aa	Known RBP	5.29	□□□□□ -1.56
FAA3	YIL009W	AAD3	P25612	363 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	MRE11	P32829	692 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	ARB1	P40024	610 aa	Known RBP	5.29	□□□□□ -1.56
FAA3	YIL009W	RAD26	P40352	1085 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	IOC3	P43596	787 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	ACF4	P47129	309 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	EFM5	P53200	248 aa	Known RBP	5.29	□□□□□ -1.56
FAA3	YIL009W	REX2	P54964	269 aa	Known RBP	5.29	□□□□□ -1.56
FAA3	YIL009W	ERB1	Q04660	807 aa	Known RBP	5.29	□□□□□ -1.56
FAA3	YIL009W	RNH1	Q04740	348 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	YOR352W	Q08816	343 aa		5.29	□□□□□ -1.56
FAA3	YIL009W	PMS1	P14242	873 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SEC23	P15303	768 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	DIT2	P21595	489 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	VPH1	P32563	840 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	SRP40	P32583	406 aa	Predicted RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	PEP12	P32854	288 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	ABZ1	P37254	787 aa	Predicted RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	RKM3	P38222	552 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	YER034W	P40022	185 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	LAM5	P43560	674 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SRB7	P47822	140 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SPP382	Q06411	708 aa	Predicted RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	BMS1	Q08965	1183 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	COX6	P00427	148 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	CDC60	P26637	1090 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	DPH5	P32469	300 aa	Predicted RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	GUA1	P38625	525 aa	Known RBP	5.28	□□□□□ -1.56
FAA3	YIL009W	YLF2	P38746	405 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	YAP1801	P38856	637 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SHE4	P51534	789 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SHE10	P53075	577 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	RAD33	Q04231	177 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	YDR338C	Q05497	695 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	SLX4	Q12098	748 aa		5.28	□□□□□ -1.56
FAA3	YIL009W	RPB2	P08518	1224 aa	Known RBP	5.27	□□□□□ -1.57
FAA3	YIL009W	PET123	P17558	318 aa		5.27	□□□□□ -1.57
FAA3	YIL009W	FAR1	P21268	830 aa		5.27	□□□□□ -1.57
FAA3	YIL009W	DLD1	P32891	587 aa		5.27	□□□□□ -1.57
FAA3	YIL009W	NPL4	P33755	580 aa		5.27	□□□□□ -1.57
FAA3	YIL009W	GLO3	P38682	493 aa	Known RBP	5.27	□□□□□ -1.57
FAA3	YIL009W	PEX18	P38855	283 aa		5.27	□□□□□ -1.57
FAA3	YIL009W	FTR1	P40088	404 aa		5.27	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 33.7 ms